Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0379151 Rosa chinensis HOM05D000003 ORTHO05D020750 3.1e-29 131.0 59 100.0
RcHm_v2.0_Chr2g0168801 Rosa chinensis HOM05D000003 ORTHO05D020750 3.1e-29 131.0 59 100.0
RcHm_v2.0_Chr3g0453641 Rosa chinensis HOM05D000003 ORTHO05D000004 6.9e-29 129.8 59 98.3
RcHm_v2.0_Chr3g0462451 Rosa chinensis HOM05D005989 ORTHO05D000022 1.0e-27 125.9 57 98.2
RcHm_v2.0_Chr3g0457461 Rosa chinensis HOM05D000003 ORTHO05D020750 1.3e-27 125.6 59 94.9
RcHm_v2.0_Chr7g0185631 Rosa chinensis HOM05D000155 ORTHO05D000022 1.3e-27 125.6 59 94.9
RcHm_v2.0_Chr2g0160431 Rosa chinensis HOM05D000003 ORTHO05D000004 2.2e-27 124.8 56 100.0
RcHm_v2.0_Chr3g0465511 Rosa chinensis HOM05D000155 ORTHO05D000022 3.4e-20 100.9 47 95.7
MD07G1021300 Malus domestica HOM05D000155 ORTHO05D000022 6.5e-11 70.1 53 56.6
MD02G1050700 Malus domestica HOM05D000155 ORTHO05D000022 1.9e-10 68.6 53 54.7
MD13G1019000 Malus domestica HOM05D000155 ORTHO05D000022 9.4e-10 66.2 53 54.7
RcHm_v2.0_Chr1g0352021 Rosa chinensis HOM05D005989 ORTHO05D000022 9.4e-10 66.2 55 50.9
RcHm_v2.0_Chr6g0264461 Rosa chinensis HOM05D005989 ORTHO05D000022 9.4e-10 66.2 55 50.9
RcHm_v2.0_Chr5g0077831 Rosa chinensis HOM05D005989 ORTHO05D011902 2.7e-09 64.7 55 47.3
Lalb_Chr18g0052711 Lupinus albus HOM05D005989 ORTHO05D000022 3.0e-08 61.2 55 45.5
FAN08G1873 Fragaria x ananassa HOM05D030830 ORTHO05D020750 5.1e-08 60.5 39 64.1
RcHm_v2.0_Chr2g0133661 Rosa chinensis HOM05D000155 ORTHO05D000022 8.8e-08 59.7 54 50.0
RcHm_v2.0_Chr3g0454631 Rosa chinensis HOM05D002340 ORTHO05D003624 8.8e-08 59.7 54 50.0
Medtr3g052720 Medicago truncatula HOM05D000001 ORTHO05D000003 1.1e-07 59.3 47 51.1
Atru.chr2.2552 Acer truncatum HOM05D005989 ORTHO05D000022 1.5e-07 58.9 55 45.5
RcHm_v2.0_Chr2g0140031 Rosa chinensis HOM05D000003 ORTHO05D000004 1.5e-07 58.9 55 49.1
RcHm_v2.0_Chr6g0259301 Rosa chinensis HOM05D000155 ORTHO05D000022 1.5e-07 58.9 54 50.0
FAN19G0347 Fragaria x ananassa HOM05D000277 ORTHO05D000214 2.6e-07 58.2 53 43.4
RcHm_v2.0_Chr4g0393351 Rosa chinensis HOM05D000155 ORTHO05D000022 3.3e-07 57.8 54 46.3
RcHm_v2.0_Chr5g0016091 Rosa chinensis HOM05D005989 ORTHO05D020750 3.3e-07 57.8 54 46.3
RcHm_v2.0_Chr7g0222341 Rosa chinensis HOM05D005989 ORTHO05D017036 3.3e-07 57.8 55 43.6
RcHm_v2.0_Chr3g0459251 Rosa chinensis HOM05D005989 ORTHO05D000022 5.7e-07 57.0 54 44.4
Lalb_Chr06g0160781 Lupinus albus HOM05D005989 ORTHO05D000022 7.4e-07 56.6 54 42.6
RcHm_v2.0_Chr2g0102721 Rosa chinensis HOM05D005989 ORTHO05D020750 7.4e-07 56.6 51 45.1
RcHm_v2.0_Chr4g0395061 Rosa chinensis HOM05D005989 ORTHO05D000022 9.7e-07 56.2 54 44.4
Atru.chr1.1636 Acer truncatum HOM05D005989 ORTHO05D000022 1.7e-06 55.5 55 41.8
Atru.chr2.2454 Acer truncatum HOM05D005989 ORTHO05D000022 1.7e-06 55.5 55 41.8
RcHm_v2.0_Chr7g0184971 Rosa chinensis HOM05D005989 ORTHO05D000022 1.7e-06 55.5 56 42.9
Atru.chr5.427 Acer truncatum HOM05D000155 ORTHO05D000022 2.2e-06 55.1 54 44.4
Medtr3g026170 Medicago truncatula HOM05D009351 ORTHO05D011822 2.2e-06 55.1 55 45.5
Atru.chr7.890 Acer truncatum HOM05D005989 ORTHO05D000022 6.3e-06 53.5 56 42.9
Medtr7g059380 Medicago truncatula HOM05D005989 ORTHO05D000022 8.2e-06 53.1 56 37.5


User provided reference genes

Program Settings