Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0379111 Rosa chinensis HOM05D007222 ORTHO05D010132 1.9e-261 905.2 436 100.0
RcHm_v2.0_Chr1g0379031 Rosa chinensis HOM05D007222 ORTHO05D010132 6.0e-178 627.9 433 70.7
RcHm_v2.0_Chr1g0378721 Rosa chinensis HOM05D007222 ORTHO05D010132 3.9e-177 625.2 433 70.4
RcHm_v2.0_Chr1g0379231 Rosa chinensis HOM05D007222 ORTHO05D010132 1.1e-176 623.6 432 70.4
RcHm_v2.0_Chr1g0379381 Rosa chinensis HOM05D007222 ORTHO05D010132 1.1e-176 623.6 432 70.4
FvH4_7g27710 Fragaria vesca HOM05D007222 ORTHO05D010132 2.1e-82 310.5 432 42.6
FAN03G1025 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.8e-81 307.4 432 42.1
FAN06G0811 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.6e-80 303.5 382 45.5
FvH4_7g27660 Fragaria vesca HOM05D007222 ORTHO05D010132 4.4e-80 302.8 432 41.7
FAN01G2879 Fragaria x ananassa HOM05D000202 ORTHO05D010132 5.7e-80 302.4 382 45.3
FAN06G0677 Fragaria x ananassa HOM05D007222 ORTHO05D010132 9.8e-80 301.6 432 42.8
FvH4_7g27720 Fragaria vesca HOM05D007222 ORTHO05D010132 1.7e-79 300.8 408 44.9
FAN10G3229 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.4e-78 297.7 427 42.4
FvH4_7g27670 Fragaria vesca HOM05D007222 ORTHO05D010132 1.8e-78 297.4 427 42.6
FAN06G2815 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.4e-78 295.8 427 42.4
FAN06G1439 Fragaria x ananassa HOM05D007222 ORTHO05D010132 7.0e-78 295.4 427 42.2
FvH4_7g13450 Fragaria vesca HOM05D007222 ORTHO05D010132 2.3e-76 290.4 432 41.9
FAN03G0079 Fragaria x ananassa HOM05D001548 ORTHO05D003901 2.3e-76 290.4 377 42.7
FAN06G5048 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.1e-73 280.0 420 40.5
FvH4_7g27631 Fragaria vesca HOM05D007222 ORTHO05D010132 1.5e-72 277.7 382 41.4
FAN06G2032 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.8e-72 275.8 432 41.7
FAN06G2615 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.7e-71 273.1 382 41.1
FAN06G2272 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.4e-70 271.2 382 41.1
FAN03G0896 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.4e-70 269.2 441 39.7
FAN10G0676 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.6e-69 267.7 407 40.0
FAN06G2198 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.2e-57 226.1 254 47.2
MD06G1179300 Malus domestica HOM05D007222 ORTHO05D010132 3.5e-53 213.4 422 36.7
Prupe.5G179400 Prunus persica HOM05D007222 ORTHO05D010132 6.0e-53 212.6 380 36.3
FAN06G4891 Fragaria x ananassa HOM05D007222 ORTHO05D010132 7.8e-53 212.2 290 41.7
FAN03G1782 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.1e-51 208.4 362 34.0
FAN01G0578 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.1e-50 204.1 320 40.0
MD06G1179400 Malus domestica HOM05D007222 ORTHO05D010132 5.2e-49 199.5 388 37.1
Prupe.5G196500 Prunus persica HOM05D007222 ORTHO05D010132 5.8e-48 196.1 392 36.0
FvH4_5g16160 Fragaria vesca HOM05D007222 ORTHO05D019190 1.3e-47 194.9 403 34.5
FAN18G1099 Fragaria x ananassa HOM05D007222 ORTHO05D019190 6.4e-47 192.6 403 34.2
RcHm_v2.0_Chr7g0179991 Rosa chinensis HOM05D007222 ORTHO05D019190 7.1e-46 189.1 415 33.5
Prupe.5G216900 Prunus persica HOM05D007222 ORTHO05D010132 1.0e-44 185.3 384 33.3
Prupe.5G196700 Prunus persica HOM05D007222 ORTHO05D010132 3.9e-44 183.3 404 33.9
Prupe.5G196600 Prunus persica HOM05D007222 ORTHO05D010132 5.1e-44 183.0 415 34.0
RcHm_v2.0_Chr7g0205711 Rosa chinensis HOM05D007222 ORTHO05D020701 1.6e-42 177.9 386 36.3
FAN01G0286 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.1e-42 177.6 370 33.2
MD17G1269500 Malus domestica HOM05D007222 ORTHO05D036617 1.2e-40 171.8 409 32.8
Prupe.8G014700 Prunus persica HOM05D007222 ORTHO05D010132 2.0e-40 171.0 385 33.5
FvH4_5g02900 Fragaria vesca HOM05D007222 ORTHO05D029649 7.6e-40 169.1 388 34.5
FAN18G1328 Fragaria x ananassa HOM05D007222 ORTHO05D029649 7.6e-40 169.1 388 34.3
Prupe.5G196800 Prunus persica HOM05D007222 ORTHO05D010132 9.9e-40 168.7 263 40.3
FAN03G0246 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.7e-39 167.9 181 49.7
FAN13G2764 Fragaria x ananassa HOM05D007222 ORTHO05D029649 2.2e-39 167.5 369 35.8
Prupe.I003600 Prunus persica HOM05D007222 ORTHO05D010132 3.2e-38 163.7 390 34.1
Prupe.5G190300 Prunus persica HOM05D007222 ORTHO05D010132 7.1e-38 162.5 389 34.4
MD06G1178900 Malus domestica HOM05D007222 ORTHO05D010132 2.7e-37 160.6 248 41.9
Prupe.5G190500 Prunus persica HOM05D007222 ORTHO05D010132 7.9e-37 159.1 389 31.9
Prupe.3G199800 Prunus persica HOM05D007222 ORTHO05D010132 3.9e-36 156.8 378 32.5
Prupe.5G190600 Prunus persica HOM05D007222 ORTHO05D010132 6.6e-36 156.0 390 32.3
Prupe.7G215500 Prunus persica HOM05D007222 ORTHO05D010132 2.5e-35 154.1 282 35.5
Prupe.3G221000 Prunus persica HOM05D007222 ORTHO05D036617 3.3e-35 153.7 392 31.4
Prupe.3G199700 Prunus persica HOM05D007222 ORTHO05D010132 1.6e-34 151.4 384 31.5
Prupe.5G196400 Prunus persica HOM05D007222 ORTHO05D010132 1.6e-34 151.4 311 34.4
Prupe.3G220200 Prunus persica HOM05D007222 ORTHO05D036617 2.1e-34 151.0 391 29.9
FAN18G1465 Fragaria x ananassa HOM05D007222 ORTHO05D035251 8.1e-34 149.1 413 29.5
FAN10G3128 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.4e-33 147.5 159 47.2
Prupe.2G232100 Prunus persica HOM05D007222 ORTHO05D010132 5.3e-33 146.4 394 30.7
FAN08G3302 Fragaria x ananassa HOM05D007222 ORTHO05D020701 8.4e-31 139.0 388 29.9
FAN06G1181 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.2e-29 135.2 266 35.7
Prupe.7G215400 Prunus persica HOM05D007222 ORTHO05D010132 4.6e-29 133.3 314 33.1
FAN19G1742 Fragaria x ananassa HOM05D007222 ORTHO05D020701 7.9e-29 132.5 375 30.1
FAN06G2293 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.0e-25 120.2 331 28.4
RcHm_v2.0_Chr7g0219841 Rosa chinensis HOM05D007222 ORTHO05D020701 1.5e-24 118.2 379 31.4
FvH4_5g02920 Fragaria vesca HOM05D007222 ORTHO05D046396 1.3e-23 115.2 384 28.6
FvH4_7g27640 Fragaria vesca HOM05D007222 ORTHO05D010132 4.9e-23 113.2 176 40.3
FAN18G3407 Fragaria x ananassa HOM05D007222 ORTHO05D046396 4.9e-23 113.2 384 28.1
FAN06G3913 Fragaria x ananassa HOM05D007222 ORTHO05D010132 7.1e-22 109.4 271 34.3
FAN26G2054 Fragaria x ananassa HOM05D013290 ORTHO05D016295 1.6e-21 108.2 338 31.1
RcHm_v2.0_Chr2g0100421 Rosa chinensis HOM05D013290 ORTHO05D016295 2.1e-21 107.8 377 28.9
RcHm_v2.0_Chr4g0388551 Rosa chinensis HOM05D007222 ORTHO05D010132 2.7e-21 107.5 342 28.7
FAN06G1334 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.8e-20 104.8 175 35.4
FAN26G0503 Fragaria x ananassa HOM05D013290 ORTHO05D016295 6.7e-20 102.8 284 31.7
FAN06G3778 Fragaria x ananassa HOM05D007222 ORTHO05D010132 8.7e-20 102.4 175 36.0
FAN18G3680 Fragaria x ananassa HOM05D007222 ORTHO05D020701 1.1e-19 102.1 234 32.1
FvH4_1g11671 Fragaria vesca HOM05D013290 ORTHO05D016295 4.3e-19 100.1 328 29.6
FvH4_5g15971 Fragaria vesca HOM05D007222 ORTHO05D035251 5.7e-19 99.8 417 27.8
FAN26G0118 Fragaria x ananassa HOM05D013290 ORTHO05D016295 5.7e-19 99.8 357 30.3
FAN08G2897 Fragaria x ananassa HOM05D007222 ORTHO05D029649 1.6e-18 98.2 290 28.6
FAN19G0139 Fragaria x ananassa HOM05D013290 ORTHO05D016295 1.6e-18 98.2 326 29.4
FvH4_1g23410 Fragaria vesca HOM05D013290 ORTHO05D016295 2.1e-18 97.8 287 32.1
FAN10G0066 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.1e-18 97.8 141 39.7
FAN19G1864 Fragaria x ananassa HOM05D013290 ORTHO05D016295 4.8e-18 96.7 287 32.1
FvH4_5g25390 Fragaria vesca HOM05D007222 ORTHO05D020701 6.3e-18 96.3 137 40.1
FAN06G0895 Fragaria x ananassa HOM05D007222 ORTHO05D046523 6.5e-15 86.3 158 39.2
MD06G1078700 Malus domestica HOM05D007222 ORTHO05D010132 6.5e-15 86.3 187 31.6
FAN01G2703 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.1e-14 85.5 156 37.8
RcHm_v2.0_Chr7g0180241 Rosa chinensis HOM05D000007 ORTHO05D019190 1.1e-14 85.5 182 33.5
FvH4_5g15972 Fragaria vesca HOM05D007222 ORTHO05D035251 2.5e-14 84.3 179 29.1
Prupe.5G149900 Prunus persica HOM05D007222 ORTHO05D010132 4.2e-14 83.6 152 38.2
Prupe.5G121900 Prunus persica HOM05D007222 ORTHO05D010132 1.8e-12 78.2 198 30.8
MD01G1106600 Malus domestica HOM05D007222 ORTHO05D010132 8.7e-12 75.9 139 33.1
MD16G1080700 Malus domestica HOM05D007222 ORTHO05D010132 2.2e-10 71.2 99 39.4
MD14G1191500 Malus domestica HOM05D007222 ORTHO05D048640 2.8e-10 70.9 153 35.3
FvH4_1g11560 Fragaria vesca HOM05D013290 ORTHO05D016295 1.1e-09 68.9 298 26.2
MD14G1191600 Malus domestica HOM05D007222 ORTHO05D048640 1.8e-09 68.2 166 32.5
MD02G1032200 Malus domestica HOM05D007222 ORTHO05D010132 5.3e-09 66.6 102 36.3
FAN06G1627 Fragaria x ananassa HOM05D007222 ORTHO05D010132 6.9e-09 66.2 79 40.5
FAN06G5098 Fragaria x ananassa HOM05D007222 ORTHO05D010132 6.9e-09 66.2 103 38.8
Dinv14371 Davidia involucrata HOM05D039675 ORTHO05D029226 3.2e-06 57.4 422 22.7
FAN03G0304 Fragaria x ananassa HOM05D000202 ORTHO05D000117 7.2e-06 56.2 72 41.7
Dinv24221 Davidia involucrata HOM05D015193 ORTHO05D005682 9.4e-06 55.8 207 28.5


User provided reference genes

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