Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0379031 Rosa chinensis HOM05D007222 ORTHO05D010132 5.4e-267 923.7 446 100.0
RcHm_v2.0_Chr1g0378721 Rosa chinensis HOM05D007222 ORTHO05D010132 2.1e-247 858.6 421 98.3
RcHm_v2.0_Chr1g0379231 Rosa chinensis HOM05D007222 ORTHO05D010132 8.9e-246 853.2 420 97.9
RcHm_v2.0_Chr1g0379381 Rosa chinensis HOM05D007222 ORTHO05D010132 8.9e-246 853.2 420 97.9
RcHm_v2.0_Chr1g0379111 Rosa chinensis HOM05D007222 ORTHO05D010132 2.3e-177 625.9 433 70.7
FvH4_7g27710 Fragaria vesca HOM05D007222 ORTHO05D010132 1.0e-76 291.6 371 45.3
FAN03G1025 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.7e-75 285.8 371 45.0
FvH4_7g27660 Fragaria vesca HOM05D007222 ORTHO05D010132 6.3e-74 282.3 371 44.2
FAN01G2879 Fragaria x ananassa HOM05D000202 ORTHO05D010132 6.3e-74 282.3 373 45.0
FvH4_7g27720 Fragaria vesca HOM05D007222 ORTHO05D010132 4.1e-73 279.6 387 44.4
FAN06G0677 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.3e-73 279.3 373 44.8
FAN10G3229 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.0e-71 275.0 418 41.4
FAN03G0079 Fragaria x ananassa HOM05D001548 ORTHO05D003901 1.3e-71 274.6 382 41.1
FvH4_7g13450 Fragaria vesca HOM05D007222 ORTHO05D010132 1.7e-71 274.2 373 44.8
FvH4_7g27670 Fragaria vesca HOM05D007222 ORTHO05D010132 1.7e-71 274.2 418 41.6
FAN06G0811 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.9e-71 273.5 373 44.5
FAN06G2815 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.9e-71 273.5 418 41.4
FAN06G1439 Fragaria x ananassa HOM05D007222 ORTHO05D010132 6.5e-71 272.3 418 41.1
FAN06G5048 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.6e-69 267.7 367 42.8
FAN06G2615 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.2e-68 262.7 374 41.7
FvH4_7g27631 Fragaria vesca HOM05D007222 ORTHO05D010132 1.1e-67 261.5 374 41.7
FAN06G2272 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.5e-67 261.2 374 41.7
FAN10G0676 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.7e-66 256.5 374 41.2
FAN03G0896 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.9e-64 249.2 373 42.1
FAN06G2032 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.3e-63 248.1 374 42.2
FAN06G4891 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.5e-54 217.2 240 47.9
Prupe.5G179400 Prunus persica HOM05D007222 ORTHO05D010132 2.0e-51 207.6 387 35.9
Prupe.5G196500 Prunus persica HOM05D007222 ORTHO05D010132 4.9e-50 203.0 313 40.3
MD06G1179300 Malus domestica HOM05D007222 ORTHO05D010132 2.0e-48 197.6 418 34.2
RcHm_v2.0_Chr7g0179991 Rosa chinensis HOM05D007222 ORTHO05D019190 3.5e-48 196.8 393 34.4
FAN01G0578 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.3e-47 194.9 319 40.8
Prupe.5G196700 Prunus persica HOM05D007222 ORTHO05D010132 3.8e-47 193.4 394 34.5
FvH4_5g16160 Fragaria vesca HOM05D007222 ORTHO05D019190 8.6e-47 192.2 382 35.3
FAN06G2198 Fragaria x ananassa HOM05D007222 ORTHO05D010132 8.6e-47 192.2 251 43.8
FAN18G1099 Fragaria x ananassa HOM05D007222 ORTHO05D019190 4.2e-46 189.9 382 35.1
MD06G1179400 Malus domestica HOM05D007222 ORTHO05D010132 9.5e-46 188.7 389 36.2
Prupe.8G014700 Prunus persica HOM05D007222 ORTHO05D010132 1.0e-44 185.3 356 37.1
Prupe.5G216900 Prunus persica HOM05D007222 ORTHO05D010132 2.6e-43 180.6 364 36.5
Prupe.5G196600 Prunus persica HOM05D007222 ORTHO05D010132 4.4e-43 179.9 400 33.8
MD17G1269500 Malus domestica HOM05D007222 ORTHO05D036617 4.9e-42 176.4 376 34.6
RcHm_v2.0_Chr7g0205711 Rosa chinensis HOM05D007222 ORTHO05D020701 4.9e-42 176.4 374 36.6
Prupe.5G196800 Prunus persica HOM05D007222 ORTHO05D010132 5.4e-41 172.9 264 40.5
FAN03G1782 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.2e-40 171.8 366 33.3
FAN01G0286 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.1e-38 165.2 363 34.2
MD06G1178900 Malus domestica HOM05D007222 ORTHO05D010132 1.5e-38 164.9 250 41.2
FAN03G0246 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.3e-38 163.3 184 47.3
FAN13G2764 Fragaria x ananassa HOM05D007222 ORTHO05D029649 3.1e-36 157.1 368 35.1
Prupe.3G199800 Prunus persica HOM05D007222 ORTHO05D010132 1.2e-35 155.2 358 34.1
Prupe.7G215500 Prunus persica HOM05D007222 ORTHO05D010132 5.8e-35 152.9 270 35.9
FAN10G3128 Fragaria x ananassa HOM05D007222 ORTHO05D010132 9.8e-35 152.1 150 50.7
FvH4_5g02900 Fragaria vesca HOM05D007222 ORTHO05D029649 1.3e-34 151.8 389 33.4
FAN18G1465 Fragaria x ananassa HOM05D007222 ORTHO05D035251 1.3e-34 151.8 412 31.3
FAN18G1328 Fragaria x ananassa HOM05D007222 ORTHO05D029649 2.2e-34 151.0 391 33.2
Prupe.3G199700 Prunus persica HOM05D007222 ORTHO05D010132 6.4e-34 149.4 380 33.7
Prupe.3G220200 Prunus persica HOM05D007222 ORTHO05D036617 7.0e-33 146.0 372 31.2
Prupe.3G221000 Prunus persica HOM05D007222 ORTHO05D036617 7.0e-33 146.0 377 30.8
Prupe.I003600 Prunus persica HOM05D007222 ORTHO05D010132 7.0e-33 146.0 319 34.2
Prupe.5G196400 Prunus persica HOM05D007222 ORTHO05D010132 2.3e-31 141.0 250 37.6
Prupe.5G190300 Prunus persica HOM05D007222 ORTHO05D010132 3.0e-31 140.6 322 33.9
Prupe.5G190500 Prunus persica HOM05D007222 ORTHO05D010132 1.9e-30 137.9 320 31.9
Prupe.5G190600 Prunus persica HOM05D007222 ORTHO05D010132 1.9e-30 137.9 396 30.6
Prupe.2G232100 Prunus persica HOM05D007222 ORTHO05D010132 2.8e-29 134.0 268 33.6
Prupe.7G215400 Prunus persica HOM05D007222 ORTHO05D010132 6.2e-29 132.9 314 33.8
FAN08G3302 Fragaria x ananassa HOM05D007222 ORTHO05D020701 8.1e-29 132.5 438 27.9
FAN06G2293 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.7e-26 124.8 318 28.9
FvH4_7g27640 Fragaria vesca HOM05D007222 ORTHO05D010132 1.4e-25 121.7 128 50.8
FAN19G1742 Fragaria x ananassa HOM05D007222 ORTHO05D020701 2.4e-25 120.9 372 28.8
RcHm_v2.0_Chr2g0100421 Rosa chinensis HOM05D013290 ORTHO05D016295 7.1e-25 119.4 381 28.6
FAN06G1181 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.5e-24 117.1 256 32.8
FAN18G3407 Fragaria x ananassa HOM05D007222 ORTHO05D046396 3.0e-23 114.0 415 28.7
FvH4_5g02920 Fragaria vesca HOM05D007222 ORTHO05D046396 1.5e-22 111.7 332 30.4
RcHm_v2.0_Chr7g0219841 Rosa chinensis HOM05D007222 ORTHO05D020701 7.3e-22 109.4 377 29.4
FAN08G2897 Fragaria x ananassa HOM05D007222 ORTHO05D029649 2.1e-21 107.8 321 30.2
RcHm_v2.0_Chr4g0388551 Rosa chinensis HOM05D007222 ORTHO05D010132 3.6e-21 107.1 265 31.7
FAN10G0066 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.1e-20 105.5 86 55.8
FvH4_1g23410 Fragaria vesca HOM05D013290 ORTHO05D016295 1.5e-19 101.7 374 28.6
FvH4_1g11671 Fragaria vesca HOM05D013290 ORTHO05D016295 3.4e-19 100.5 309 29.1
FAN26G2054 Fragaria x ananassa HOM05D013290 ORTHO05D016295 3.4e-19 100.5 307 29.6
FAN19G1864 Fragaria x ananassa HOM05D013290 ORTHO05D016295 9.9e-19 99.0 363 28.4
FAN26G0118 Fragaria x ananassa HOM05D013290 ORTHO05D016295 9.9e-19 99.0 309 30.1
FAN19G0139 Fragaria x ananassa HOM05D013290 ORTHO05D016295 1.3e-18 98.6 307 29.0
FAN18G3680 Fragaria x ananassa HOM05D007222 ORTHO05D020701 1.7e-18 98.2 252 31.0
FvH4_5g15971 Fragaria vesca HOM05D007222 ORTHO05D035251 3.7e-18 97.1 330 29.7
FAN26G0503 Fragaria x ananassa HOM05D013290 ORTHO05D016295 6.4e-18 96.3 279 30.1
Prupe.5G149900 Prunus persica HOM05D007222 ORTHO05D010132 1.2e-16 92.0 152 38.2
FAN06G3913 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.1e-16 91.3 261 31.0
RcHm_v2.0_Chr7g0180241 Rosa chinensis HOM05D000007 ORTHO05D019190 2.1e-16 91.3 188 31.4
FvH4_5g25390 Fragaria vesca HOM05D007222 ORTHO05D020701 2.3e-15 87.8 155 36.8
FAN03G1041 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.0e-15 87.4 85 50.6
MD06G1078700 Malus domestica HOM05D007222 ORTHO05D010132 1.1e-14 85.5 179 34.6
FvH4_5g15972 Fragaria vesca HOM05D007222 ORTHO05D035251 1.9e-14 84.7 198 29.8
FAN06G3778 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.2e-13 82.0 167 35.3
FAN06G0895 Fragaria x ananassa HOM05D007222 ORTHO05D046523 1.6e-13 81.6 210 33.8
FAN06G1334 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.8e-13 80.9 165 33.9
Prupe.5G190200 Prunus persica HOM05D007222 ORTHO05D010132 1.5e-11 75.1 112 39.3
FAN06G1627 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.0e-11 74.7 79 41.8
Prupe.5G121900 Prunus persica HOM05D007222 ORTHO05D010132 5.8e-11 73.2 195 31.3
Dinv14371 Davidia involucrata HOM05D039675 ORTHO05D029226 9.9e-11 72.4 330 26.7
FvH4_1g11560 Fragaria vesca HOM05D013290 ORTHO05D016295 1.3e-10 72.0 299 26.4
MD01G1106600 Malus domestica HOM05D007222 ORTHO05D010132 4.9e-10 70.1 126 35.7
MD14G1191500 Malus domestica HOM05D007222 ORTHO05D048640 8.4e-10 69.3 154 34.4
MD14G1191600 Malus domestica HOM05D007222 ORTHO05D048640 1.9e-09 68.2 166 33.7
MD16G1080700 Malus domestica HOM05D007222 ORTHO05D010132 3.2e-09 67.4 88 42.0
FAN01G2703 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.1e-08 64.7 146 32.2
Dinv24221 Davidia involucrata HOM05D015193 ORTHO05D005682 3.0e-07 60.8 289 26.0
MD02G1032200 Malus domestica HOM05D007222 ORTHO05D010132 8.7e-07 59.3 98 34.7
FAN10G0917 Fragaria x ananassa HOM05D007222 ORTHO05D010132 7.3e-06 56.2 50 52.0


User provided reference genes

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