Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0378751 Rosa chinensis HOM05D006849 ORTHO05D003348 1.2e-62 243.0 130 100.0
RcHm_v2.0_Chr1g0379271 Rosa chinensis HOM05D006849 ORTHO05D003348 3.6e-62 241.5 130 99.2
RcHm_v2.0_Chr1g0371171 Rosa chinensis HOM05D006849 ORTHO05D003348 5.6e-23 111.3 117 51.3
RcHm_v2.0_Chr3g0491361 Rosa chinensis HOM05D006849 ORTHO05D003348 6.4e-19 97.8 129 45.7
RcHm_v2.0_Chr7g0206181 Rosa chinensis HOM05D006849 ORTHO05D003348 1.4e-18 96.7 119 47.1
RcHm_v2.0_Chr2g0149141 Rosa chinensis HOM05D006849 ORTHO05D003348 4.2e-18 95.1 125 43.2
RcHm_v2.0_Chr5g0010461 Rosa chinensis HOM05D006849 ORTHO05D003348 9.2e-18 94.0 111 45.9
RcHm_v2.0_Chr2g0133251 Rosa chinensis HOM05D006849 ORTHO05D003348 3.5e-17 92.0 134 42.5
FvH4_5g19920 Fragaria vesca HOM05D006849 ORTHO05D003348 8.7e-16 87.4 116 47.4
FAN16G1806 Fragaria x ananassa HOM05D006849 ORTHO05D003348 8.7e-16 87.4 116 47.4
FAN04G0160 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.6e-14 83.2 107 46.7
FAN06G3145 Fragaria x ananassa HOM05D013178 ORTHO05D019138 4.8e-14 81.6 105 46.7
FAN10G4353 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.1e-13 79.0 103 45.6
FAN06G4964 Fragaria x ananassa HOM05D006849 ORTHO05D003348 5.3e-13 78.2 91 49.5
FAN02G2385 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.4e-12 75.5 111 44.1
FAN06G0436 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.4e-12 75.5 111 44.1
FAN14G2538 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.4e-12 75.5 122 40.2
RcHm_v2.0_Chr2g0141711 Rosa chinensis HOM05D006849 ORTHO05D003348 5.8e-12 74.7 119 37.8
FAN21G3588 Fragaria x ananassa HOM05D006849 ORTHO05D003348 2.2e-11 72.8 96 46.9
FAN22G1474 Fragaria x ananassa HOM05D006849 ORTHO05D003348 2.2e-11 72.8 135 40.7
FvH4_3g24350 Fragaria vesca HOM05D006849 ORTHO05D003348 2.9e-11 72.4 122 41.0
FAN09G2827 Fragaria x ananassa HOM05D006849 ORTHO05D003348 6.4e-11 71.2 106 40.6
FAN14G5332 Fragaria x ananassa HOM05D006849 ORTHO05D003348 6.4e-11 71.2 106 45.3
FvH4_4g18140 Fragaria vesca HOM05D006849 ORTHO05D003348 8.4e-11 70.9 103 43.7
FAN07G1000 Fragaria x ananassa HOM05D006849 ORTHO05D003348 8.4e-11 70.9 106 40.6
FvH4_3g07130 Fragaria vesca HOM05D006849 ORTHO05D003348 1.1e-10 70.5 122 41.0
FAN19G3137 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.1e-10 70.5 111 41.4
FvH4_5g21501 Fragaria vesca HOM05D006849 ORTHO05D003348 1.4e-10 70.1 106 41.5
FAN03G1780 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.2e-10 68.9 104 42.3
FAN23G2888 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.2e-10 68.9 89 44.9
FAN26G2619 Fragaria x ananassa HOM05D006849 ORTHO05D003348 7.1e-10 67.8 63 50.8
FvH4_6g33630 Fragaria vesca HOM05D006849 ORTHO05D003348 1.2e-09 67.0 122 40.2
FAN20G1145 Fragaria x ananassa HOM05D006849 ORTHO05D003348 7.8e-09 64.3 128 34.4
FAN27G2674 Fragaria x ananassa HOM05D006849 ORTHO05D003348 7.8e-09 64.3 103 41.7
FAN24G2869 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.7e-08 63.2 102 41.2
FvH4_3g14392 Fragaria vesca HOM05D000004 ORTHO05D000002 3.0e-08 62.4 70 45.7
FAN08G0186 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.0e-08 62.4 86 40.7
FAN08G3609 Fragaria x ananassa HOM05D006849 ORTHO05D003348 5.1e-08 61.6 105 37.1
FAN15G3621 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.3e-07 58.9 57 49.1
FAN27G2295 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.3e-07 58.9 128 32.8
FvH4_2g22171 Fragaria vesca HOM05D006849 ORTHO05D003348 4.3e-07 58.5 112 34.8
FAN25G2444 Fragaria x ananassa HOM05D006849 ORTHO05D003348 7.3e-07 57.8 118 36.4
FAN20G2082 Fragaria x ananassa HOM05D006849 ORTHO05D003348 9.6e-07 57.4 111 34.2
FvH4_4g22470 Fragaria vesca HOM05D006849 ORTHO05D003348 2.8e-06 55.8 58 46.6
FAN10G1627 Fragaria x ananassa HOM05D006849 ORTHO05D003348 4.8e-06 55.1 64 40.6
FAN15G2956 Fragaria x ananassa HOM05D006849 ORTHO05D003348 6.2e-06 54.7 57 47.4
FAN16G1224 Fragaria x ananassa HOM05D006849 ORTHO05D003348 6.2e-06 54.7 57 47.4
FAN16G3375 Fragaria x ananassa HOM05D006849 ORTHO05D003348 6.2e-06 54.7 57 47.4


User provided reference genes

Program Settings