Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0378721 Rosa chinensis HOM05D007222 ORTHO05D010132 0.0e+00 1112.8 651 100.0
RcHm_v2.0_Chr1g0379231 Rosa chinensis HOM05D007222 ORTHO05D010132 0.0e+00 1094.0 651 98.6
RcHm_v2.0_Chr1g0379381 Rosa chinensis HOM05D007222 ORTHO05D010132 0.0e+00 1094.0 651 98.6
RcHm_v2.0_Chr1g0379031 Rosa chinensis HOM05D007222 ORTHO05D010132 1.1e-247 860.1 421 98.3
RcHm_v2.0_Chr1g0379111 Rosa chinensis HOM05D007222 ORTHO05D010132 7.5e-177 624.8 433 70.4
FvH4_7g27710 Fragaria vesca HOM05D007222 ORTHO05D010132 4.7e-78 296.6 393 44.5
FAN03G1025 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.4e-76 290.4 393 44.3
FAN01G2879 Fragaria x ananassa HOM05D000202 ORTHO05D010132 2.9e-75 287.3 395 44.3
FvH4_7g27660 Fragaria vesca HOM05D007222 ORTHO05D010132 3.7e-75 287.0 393 43.5
FAN06G0677 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.4e-74 284.3 395 44.1
FvH4_7g27720 Fragaria vesca HOM05D007222 ORTHO05D010132 4.1e-74 283.5 396 44.4
FvH4_7g13450 Fragaria vesca HOM05D007222 ORTHO05D010132 4.6e-73 280.0 423 43.0
FAN06G0811 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.3e-72 278.5 395 43.8
FAN10G3229 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.0e-72 276.6 420 41.4
FvH4_7g27670 Fragaria vesca HOM05D007222 ORTHO05D010132 1.1e-71 275.4 419 41.1
FAN06G2815 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.9e-71 274.6 419 40.8
FAN03G0079 Fragaria x ananassa HOM05D001548 ORTHO05D003901 2.5e-71 274.2 386 40.7
FAN06G1439 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.3e-71 273.5 419 40.6
FAN06G5048 Fragaria x ananassa HOM05D007222 ORTHO05D010132 9.5e-71 272.3 389 42.2
FAN06G2272 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.4e-68 263.8 391 40.7
FAN06G2615 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.8e-68 263.1 374 41.7
FvH4_7g27631 Fragaria vesca HOM05D007222 ORTHO05D010132 7.5e-68 262.7 385 41.0
FAN10G0676 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.4e-66 257.7 385 40.5
FAN03G0896 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.5e-65 253.8 395 41.5
FAN06G2032 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.3e-64 251.1 395 41.5
FAN06G4891 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.5e-55 221.9 262 46.6
Prupe.5G179400 Prunus persica HOM05D007222 ORTHO05D010132 2.0e-52 211.5 396 35.4
Prupe.5G196500 Prunus persica HOM05D007222 ORTHO05D010132 7.1e-50 203.0 307 40.7
RcHm_v2.0_Chr7g0179991 Rosa chinensis HOM05D007222 ORTHO05D019190 3.0e-48 197.6 393 34.4
FAN01G0578 Fragaria x ananassa HOM05D007222 ORTHO05D010132 6.6e-48 196.4 340 39.7
MD06G1179300 Malus domestica HOM05D007222 ORTHO05D010132 1.1e-47 195.7 395 34.4
Prupe.5G196700 Prunus persica HOM05D007222 ORTHO05D010132 1.9e-47 194.9 420 34.3
FAN06G2198 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.3e-47 194.1 255 43.5
FvH4_5g16160 Fragaria vesca HOM05D007222 ORTHO05D019190 4.3e-47 193.7 393 34.6
FAN18G1099 Fragaria x ananassa HOM05D007222 ORTHO05D019190 2.1e-46 191.4 393 34.4
MD06G1179400 Malus domestica HOM05D007222 ORTHO05D010132 3.1e-45 187.6 387 36.2
Prupe.8G014700 Prunus persica HOM05D007222 ORTHO05D010132 4.0e-45 187.2 368 37.2
Prupe.5G196600 Prunus persica HOM05D007222 ORTHO05D010132 2.2e-43 181.4 400 33.8
Prupe.5G216900 Prunus persica HOM05D007222 ORTHO05D010132 3.8e-43 180.6 364 36.5
RcHm_v2.0_Chr7g0205711 Rosa chinensis HOM05D007222 ORTHO05D020701 8.4e-43 179.5 386 36.3
MD17G1269500 Malus domestica HOM05D007222 ORTHO05D036617 7.1e-42 176.4 376 34.6
Prupe.5G196800 Prunus persica HOM05D007222 ORTHO05D010132 4.6e-41 173.7 275 39.3
FAN03G1782 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.3e-40 171.4 374 32.9
FAN01G0286 Fragaria x ananassa HOM05D007222 ORTHO05D010132 6.2e-38 163.3 360 34.2
FAN03G0246 Fragaria x ananassa HOM05D007222 ORTHO05D010132 6.2e-38 163.3 184 47.3
MD06G1178900 Malus domestica HOM05D007222 ORTHO05D010132 6.2e-38 163.3 248 41.1
FAN13G2764 Fragaria x ananassa HOM05D007222 ORTHO05D029649 7.6e-36 156.4 367 35.1
Prupe.3G199800 Prunus persica HOM05D007222 ORTHO05D010132 7.6e-36 156.4 382 32.7
FAN10G3128 Fragaria x ananassa HOM05D007222 ORTHO05D010132 9.9e-36 156.0 162 50.0
FvH4_5g02900 Fragaria vesca HOM05D007222 ORTHO05D029649 1.1e-34 152.5 389 33.4
Prupe.7G215500 Prunus persica HOM05D007222 ORTHO05D010132 1.1e-34 152.5 270 35.9
FAN18G1328 Fragaria x ananassa HOM05D007222 ORTHO05D029649 1.4e-34 152.1 391 33.2
FAN18G1465 Fragaria x ananassa HOM05D007222 ORTHO05D035251 1.4e-34 152.1 412 31.3
Prupe.3G199700 Prunus persica HOM05D007222 ORTHO05D010132 1.4e-34 152.1 395 32.7
Prupe.I003600 Prunus persica HOM05D007222 ORTHO05D010132 2.1e-33 148.3 321 34.3
Prupe.3G220200 Prunus persica HOM05D007222 ORTHO05D036617 3.5e-33 147.5 400 30.0
Prupe.3G221000 Prunus persica HOM05D007222 ORTHO05D036617 1.0e-32 146.0 377 30.8
Prupe.5G190300 Prunus persica HOM05D007222 ORTHO05D010132 8.7e-32 142.9 324 34.0
Prupe.5G196400 Prunus persica HOM05D007222 ORTHO05D010132 3.3e-31 141.0 250 37.6
Prupe.5G190500 Prunus persica HOM05D007222 ORTHO05D010132 5.6e-31 140.2 322 32.0
Prupe.5G190600 Prunus persica HOM05D007222 ORTHO05D010132 7.4e-31 139.8 391 30.4
Prupe.2G232100 Prunus persica HOM05D007222 ORTHO05D010132 1.6e-30 138.7 405 29.4
FAN08G3302 Fragaria x ananassa HOM05D007222 ORTHO05D020701 6.9e-29 133.3 408 29.7
Prupe.7G215400 Prunus persica HOM05D007222 ORTHO05D010132 6.9e-29 133.3 314 33.8
FvH4_7g27640 Fragaria vesca HOM05D007222 ORTHO05D010132 8.4e-27 126.3 150 48.0
FAN19G1742 Fragaria x ananassa HOM05D007222 ORTHO05D020701 7.1e-26 123.2 376 28.7
RcHm_v2.0_Chr1g0379041 Rosa chinensis HOM05D007222 ORTHO05D341950 9.3e-26 122.9 160 98.8
FAN06G2293 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.2e-25 122.5 318 28.6
RcHm_v2.0_Chr2g0100421 Rosa chinensis HOM05D013290 ORTHO05D016295 7.9e-25 119.8 381 28.6
FAN06G1181 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.9e-24 117.5 256 32.8
FvH4_5g02920 Fragaria vesca HOM05D007222 ORTHO05D046396 2.1e-22 111.7 332 30.4
FAN18G3407 Fragaria x ananassa HOM05D007222 ORTHO05D046396 2.1e-22 111.7 404 28.5
FAN10G0066 Fragaria x ananassa HOM05D007222 ORTHO05D010132 6.2e-22 110.2 108 50.9
RcHm_v2.0_Chr7g0219841 Rosa chinensis HOM05D007222 ORTHO05D020701 6.2e-22 110.2 377 29.4
RcHm_v2.0_Chr4g0388551 Rosa chinensis HOM05D007222 ORTHO05D010132 5.3e-21 107.1 265 31.7
FAN08G2897 Fragaria x ananassa HOM05D007222 ORTHO05D029649 9.0e-21 106.3 315 30.2
FvH4_1g23410 Fragaria vesca HOM05D013290 ORTHO05D016295 1.7e-19 102.1 374 28.6
FAN26G2054 Fragaria x ananassa HOM05D013290 ORTHO05D016295 2.9e-19 101.3 366 27.6
FvH4_1g11671 Fragaria vesca HOM05D013290 ORTHO05D016295 4.9e-19 100.5 309 29.1
FAN19G1864 Fragaria x ananassa HOM05D013290 ORTHO05D016295 1.1e-18 99.4 363 28.4
FAN26G0118 Fragaria x ananassa HOM05D013290 ORTHO05D016295 1.4e-18 99.0 309 30.1
FAN18G3680 Fragaria x ananassa HOM05D007222 ORTHO05D020701 1.9e-18 98.6 252 31.0
FAN19G0139 Fragaria x ananassa HOM05D013290 ORTHO05D016295 1.9e-18 98.6 307 29.0
FvH4_5g15971 Fragaria vesca HOM05D007222 ORTHO05D035251 4.2e-18 97.4 367 28.3
FAN26G0503 Fragaria x ananassa HOM05D013290 ORTHO05D016295 9.3e-18 96.3 279 30.1
Prupe.5G149900 Prunus persica HOM05D007222 ORTHO05D010132 1.8e-16 92.0 152 38.2
FAN06G3913 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.3e-16 91.7 261 31.0
RcHm_v2.0_Chr7g0180241 Rosa chinensis HOM05D000007 ORTHO05D019190 5.1e-16 90.5 180 32.2
FAN03G1041 Fragaria x ananassa HOM05D007222 ORTHO05D010132 8.7e-16 89.7 106 45.3
FvH4_5g25390 Fragaria vesca HOM05D007222 ORTHO05D020701 3.3e-15 87.8 155 36.8
MD06G1078700 Malus domestica HOM05D007222 ORTHO05D010132 1.3e-14 85.9 179 34.6
FvH4_5g15972 Fragaria vesca HOM05D007222 ORTHO05D035251 2.8e-14 84.7 206 29.1
FAN06G3778 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.4e-13 82.4 167 35.3
FAN06G0895 Fragaria x ananassa HOM05D007222 ORTHO05D046523 2.4e-13 81.6 210 33.8
FAN06G1334 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.1e-13 81.3 165 33.9
FAN06G1627 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.9e-11 74.7 79 41.8
Prupe.5G190200 Prunus persica HOM05D007222 ORTHO05D010132 3.8e-11 74.3 108 38.9
Prupe.5G121900 Prunus persica HOM05D007222 ORTHO05D010132 8.5e-11 73.2 195 31.3
Dinv14371 Davidia involucrata HOM05D039675 ORTHO05D029226 1.1e-10 72.8 330 26.7
FvH4_1g11560 Fragaria vesca HOM05D013290 ORTHO05D016295 1.9e-10 72.0 299 26.4
MD01G1106600 Malus domestica HOM05D007222 ORTHO05D010132 7.2e-10 70.1 126 35.7
MD14G1191600 Malus domestica HOM05D007222 ORTHO05D048640 2.1e-09 68.6 166 33.7
MD14G1191500 Malus domestica HOM05D007222 ORTHO05D048640 3.6e-09 67.8 151 34.4
MD16G1080700 Malus domestica HOM05D007222 ORTHO05D010132 4.6e-09 67.4 88 42.0
FAN01G2703 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.0e-08 64.7 146 32.2
Dinv24221 Davidia involucrata HOM05D015193 ORTHO05D005682 4.3e-07 60.8 289 26.0
MD02G1032200 Malus domestica HOM05D007222 ORTHO05D010132 1.3e-06 59.3 98 34.7
FAN10G0917 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.8e-06 57.4 72 44.4


User provided reference genes

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