Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0378661 Rosa chinensis HOM05D009281 ORTHO05D029533 8.6e-83 310.1 136 100.0
RcHm_v2.0_Chr1g0362141 Rosa chinensis HOM05D009281 ORTHO05D029533 5.4e-61 237.7 115 88.7
RcHm_v2.0_Chr1g0378631 Rosa chinensis HOM05D009281 ORTHO05D029533 7.6e-47 190.7 126 69.0
FvH4_6g20312 Fragaria vesca HOM05D009281 ORTHO05D029533 3.1e-24 115.5 116 52.6
FAN06G1935 Fragaria x ananassa HOM05D009281 ORTHO05D013600 1.4e-16 90.1 105 41.0
FAN06G2935 Fragaria x ananassa HOM05D009281 ORTHO05D013600 2.6e-15 85.9 94 42.6
FAN06G0809 Fragaria x ananassa HOM05D009281 ORTHO05D013600 3.4e-15 85.5 103 37.9
FvH4_7g29590 Fragaria vesca HOM05D009281 ORTHO05D013600 4.5e-15 85.1 72 50.0
FvH4_7g29800 Fragaria vesca HOM05D009281 ORTHO05D013600 1.0e-14 84.0 71 49.3
FAN06G1640 Fragaria x ananassa HOM05D009281 ORTHO05D013600 1.0e-14 84.0 71 49.3
FAN03G2939 Fragaria x ananassa HOM05D000169 ORTHO05D019041 3.8e-14 82.0 87 41.4
FvH4_7g30400 Fragaria vesca HOM05D009281 ORTHO05D045958 5.0e-14 81.6 75 44.0
FAN06G1566 Fragaria x ananassa HOM05D009281 ORTHO05D045958 5.0e-14 81.6 93 41.9
FAN06G3605 Fragaria x ananassa HOM05D009281 ORTHO05D013600 8.5e-14 80.9 75 44.0
FAN15G1554 Fragaria x ananassa HOM05D020101 ORTHO05D022591 9.4e-13 77.4 80 40.0
FvH4_2g02040 Fragaria vesca HOM05D020101 ORTHO05D022591 4.7e-12 75.1 80 38.8
FvH4_7g30610 Fragaria vesca HOM05D009281 ORTHO05D022669 1.4e-11 73.6 74 43.2
FAN01G1082 Fragaria x ananassa HOM05D009281 ORTHO05D022669 1.4e-11 73.6 74 43.2
FAN03G1429 Fragaria x ananassa HOM05D009281 ORTHO05D013600 1.4e-11 73.6 71 45.1
FAN06G1631 Fragaria x ananassa HOM05D009281 ORTHO05D022669 1.4e-11 73.6 74 43.2
FAN06G5091 Fragaria x ananassa HOM05D009281 ORTHO05D022669 1.4e-11 73.6 74 43.2
FAN15G2256 Fragaria x ananassa HOM05D020101 ORTHO05D022591 2.3e-11 72.8 80 38.8
FAN10G3775 Fragaria x ananassa HOM05D009281 ORTHO05D013600 3.0e-11 72.4 75 41.3
RcHm_v2.0_Chr2g0149561 Rosa chinensis HOM05D020101 ORTHO05D022591 1.1e-10 70.5 71 40.8
FAN03G1364 Fragaria x ananassa HOM05D009281 ORTHO05D013600 9.7e-10 67.4 68 45.6
FAN03G1682 Fragaria x ananassa HOM05D009281 ORTHO05D013600 1.7e-09 66.6 68 44.1
FvH4_7g30370 Fragaria vesca HOM05D009281 ORTHO05D022669 3.7e-09 65.5 115 33.9
FAN01G3093 Fragaria x ananassa HOM05D009281 ORTHO05D206966 6.3e-09 64.7 67 44.8
FAN06G3769 Fragaria x ananassa HOM05D009281 ORTHO05D022669 6.3e-09 64.7 67 44.8
Prupe.4G159500 Prunus persica HOM05D011414 ORTHO05D012868 5.3e-08 61.6 88 34.1
RcHm_v2.0_Chr5g0013641 Rosa chinensis HOM05D017196 ORTHO05D022580 1.2e-07 60.5 104 32.7
RcHm_v2.0_Chr5g0013591 Rosa chinensis HOM05D017196 ORTHO05D026743 1.5e-07 60.1 110 32.7
FAN15G2713 Fragaria x ananassa HOM05D017196 ORTHO05D022580 3.8e-06 55.5 82 41.5
FAN15G3089 Fragaria x ananassa HOM05D017196 ORTHO05D022580 3.8e-06 55.5 73 42.5


User provided reference genes

Program Settings