Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0378631 Rosa chinensis HOM05D009281 ORTHO05D029533 2.2e-185 652.1 321 100.0
RcHm_v2.0_Chr1g0378661 Rosa chinensis HOM05D009281 ORTHO05D029533 4.0e-46 189.5 126 69.0
RcHm_v2.0_Chr1g0362141 Rosa chinensis HOM05D009281 ORTHO05D029533 3.7e-36 156.4 106 64.2
FvH4_6g20312 Fragaria vesca HOM05D009281 ORTHO05D029533 7.3e-24 115.5 104 52.9
FvH4_7g29590 Fragaria vesca HOM05D009281 ORTHO05D013600 1.3e-12 78.2 67 49.3
FAN06G1935 Fragaria x ananassa HOM05D009281 ORTHO05D013600 1.3e-12 78.2 67 49.3
FAN06G2935 Fragaria x ananassa HOM05D009281 ORTHO05D013600 1.3e-12 78.2 67 49.3
FAN03G1682 Fragaria x ananassa HOM05D009281 ORTHO05D013600 4.9e-12 76.3 87 46.0
RcHm_v2.0_Chr2g0149561 Rosa chinensis HOM05D020101 ORTHO05D022591 8.4e-12 75.5 83 39.8
FvH4_7g29800 Fragaria vesca HOM05D009281 ORTHO05D013600 1.4e-11 74.7 71 47.9
FAN06G0809 Fragaria x ananassa HOM05D009281 ORTHO05D013600 1.4e-11 74.7 67 50.7
FAN06G1640 Fragaria x ananassa HOM05D009281 ORTHO05D013600 1.4e-11 74.7 71 47.9
FAN15G1554 Fragaria x ananassa HOM05D020101 ORTHO05D022591 1.4e-11 74.7 74 45.9
FvH4_2g02040 Fragaria vesca HOM05D020101 ORTHO05D022591 1.9e-11 74.3 79 44.3
FvH4_7g30610 Fragaria vesca HOM05D009281 ORTHO05D022669 3.2e-11 73.6 71 47.9
FAN01G1082 Fragaria x ananassa HOM05D009281 ORTHO05D022669 3.2e-11 73.6 71 47.9
FAN06G1631 Fragaria x ananassa HOM05D009281 ORTHO05D022669 3.2e-11 73.6 71 47.9
FAN06G5091 Fragaria x ananassa HOM05D009281 ORTHO05D022669 3.2e-11 73.6 71 47.9
FAN15G2256 Fragaria x ananassa HOM05D020101 ORTHO05D022591 3.2e-11 73.6 72 43.1
FAN03G1429 Fragaria x ananassa HOM05D009281 ORTHO05D013600 1.2e-10 71.6 80 46.2
FAN06G3769 Fragaria x ananassa HOM05D009281 ORTHO05D022669 1.6e-10 71.2 87 46.0
FAN03G2939 Fragaria x ananassa HOM05D000169 ORTHO05D019041 1.8e-09 67.8 70 42.9
RcHm_v2.0_Chr6g0246181 Rosa chinensis HOM05D014182 ORTHO05D341309 1.1e-08 65.1 76 44.7
FAN03G1364 Fragaria x ananassa HOM05D009281 ORTHO05D013600 5.6e-08 62.8 88 37.5
FvH4_7g30370 Fragaria vesca HOM05D009281 ORTHO05D022669 3.7e-07 60.1 88 39.8
FAN03G1330 Fragaria x ananassa HOM05D009281 ORTHO05D013600 1.1e-06 58.5 89 34.8
FAN01G3093 Fragaria x ananassa HOM05D009281 ORTHO05D206966 1.8e-06 57.8 67 43.3


User provided reference genes

Program Settings