Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0376501 Rosa chinensis HOM05D008398 ORTHO05D005682 1.0e-259 899.4 430 100.0
FAN06G0523 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.6e-37 161.4 367 34.6
FvH4_7g30461 Fragaria vesca HOM05D008398 ORTHO05D035411 2.0e-37 161.0 367 34.3
FAN05G0770 Fragaria x ananassa HOM05D008398 ORTHO05D005682 6.1e-34 149.4 345 36.8
FAN01G0388 Fragaria x ananassa HOM05D008398 ORTHO05D035411 1.8e-33 147.9 343 34.4
FvH4_6g50450 Fragaria vesca HOM05D008398 ORTHO05D005682 3.0e-33 147.1 381 33.9
FAN14G4819 Fragaria x ananassa HOM05D008398 ORTHO05D005682 8.9e-33 145.6 374 34.0
RcHm_v2.0_Chr1g0379941 Rosa chinensis HOM05D008398 ORTHO05D005682 4.4e-32 143.3 371 34.5
RcHm_v2.0_Chr1g0379901 Rosa chinensis HOM05D008398 ORTHO05D005682 5.7e-32 142.9 371 35.0
FAN10G3441 Fragaria x ananassa HOM05D008398 ORTHO05D005682 8.3e-31 139.0 361 34.1
FAN10G3871 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.1e-30 138.7 366 33.1
FAN03G3290 Fragaria x ananassa HOM05D005400 ORTHO05D006668 7.0e-30 136.0 363 35.0
FvH4_7g30481 Fragaria vesca HOM05D008398 ORTHO05D029520 1.7e-28 131.3 339 32.7
FAN01G2094 Fragaria x ananassa HOM05D008398 ORTHO05D029494 2.9e-28 130.6 351 33.0
FAN03G1797 Fragaria x ananassa HOM05D008398 ORTHO05D029520 3.9e-28 130.2 345 33.0
FAN03G3131 Fragaria x ananassa HOM05D008398 ORTHO05D029520 3.9e-28 130.2 345 33.0
FAN10G3802 Fragaria x ananassa HOM05D008398 ORTHO05D035411 5.0e-28 129.8 343 32.7
FAN14G2930 Fragaria x ananassa HOM05D008398 ORTHO05D005682 5.0e-28 129.8 331 35.3
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-27 128.6 272 38.6
FAN06G2579 Fragaria x ananassa HOM05D008398 ORTHO05D029494 2.5e-27 127.5 364 32.1
FAN06G1826 Fragaria x ananassa HOM05D008398 ORTHO05D035236 5.6e-27 126.3 353 34.8
FvH4_7g12650 Fragaria vesca HOM05D008398 ORTHO05D029494 2.1e-26 124.4 364 31.9
FAN06G0070 Fragaria x ananassa HOM05D008398 ORTHO05D029494 2.8e-26 124.0 364 31.9
FAN01G0845 Fragaria x ananassa HOM05D008398 ORTHO05D029520 4.7e-26 123.2 336 32.4
FAN15G2539 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.0e-25 122.1 355 34.4
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 1.4e-25 121.7 270 37.8
FAN06G3627 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.3e-25 120.9 254 35.0
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-25 120.9 277 33.6
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.0e-25 120.2 270 37.4
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 5.2e-25 119.8 269 35.3
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-24 118.2 273 35.5
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-24 118.2 269 36.4
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-24 117.9 270 36.3
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 2.0e-24 117.9 284 33.8
FAN01G2543 Fragaria x ananassa HOM05D008398 ORTHO05D046348 2.6e-24 117.5 326 33.7
FvH4_7g30731 Fragaria vesca HOM05D008398 ORTHO05D035236 3.4e-24 117.1 342 34.8
FvH4_7g30470 Fragaria vesca HOM05D008398 ORTHO05D046348 9.8e-24 115.5 353 32.9
FvH4_7g16480 Fragaria vesca HOM05D008398 ORTHO05D046080 1.3e-23 115.2 340 33.5
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-23 115.2 273 34.8
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-23 115.2 273 34.8
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 1.7e-23 114.8 277 32.9
FAN09G2688 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.7e-23 114.8 242 36.8
FvH4_5g34640 Fragaria vesca HOM05D008398 ORTHO05D005682 2.2e-23 114.4 301 34.2
FAN06G2841 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-23 114.4 267 34.5
FAN06G4694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-23 114.4 267 34.5
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-23 114.4 270 35.6
FAN10G1871 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.9e-23 113.2 229 36.7
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 8.3e-23 112.5 317 31.2
FvH4_7g28941 Fragaria vesca HOM05D006732 ORTHO05D005682 8.3e-23 112.5 136 52.2
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 8.3e-23 112.5 276 33.3
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 1.4e-22 111.7 269 34.9
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 1.4e-22 111.7 269 34.9
FvH4_7g04610 Fragaria vesca HOM05D006732 ORTHO05D005682 1.4e-22 111.7 265 34.3
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-22 110.9 269 33.8
FAN03G3183 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.2e-22 110.5 265 34.7
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.2e-22 110.5 265 34.3
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.2e-22 110.5 275 34.2
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 4.1e-22 110.2 266 31.6
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 4.1e-22 110.2 266 31.6
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.4e-22 109.8 269 34.6
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 7.0e-22 109.4 270 34.8
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.0e-22 109.4 269 34.6
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 9.2e-22 109.0 259 33.6
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-21 108.6 256 34.0
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-21 108.2 270 34.4
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 4.6e-21 106.7 338 31.4
FAN10G0863 Fragaria x ananassa HOM05D008398 ORTHO05D005682 6.0e-21 106.3 349 30.9
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.0e-20 105.5 321 30.2
FAN06G1253 Fragaria x ananassa HOM05D008398 ORTHO05D035236 1.7e-20 104.8 264 36.0
FvH4_6g28610 Fragaria vesca HOM05D008398 ORTHO05D005682 3.9e-20 103.6 189 37.6
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.6e-20 102.8 271 32.8
FvH4_7g16534 Fragaria vesca HOM05D008398 ORTHO05D046322 8.6e-20 102.4 360 29.7
FAN18G3618 Fragaria x ananassa HOM05D008398 ORTHO05D005682 9.5e-19 99.0 307 31.9
FAN01G2330 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-18 98.6 253 33.6
FAN06G3071 Fragaria x ananassa HOM05D008398 ORTHO05D046080 2.1e-18 97.8 337 32.6
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 4.7e-18 96.7 367 29.7
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 8.1e-18 95.9 279 29.0
FvH4_1g03870 Fragaria vesca HOM05D006732 ORTHO05D005682 1.1e-17 95.5 193 36.8
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.1e-17 95.5 285 29.8
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-17 94.4 193 36.3
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.2e-17 93.2 192 34.9
FAN06G2795 Fragaria x ananassa HOM05D008398 ORTHO05D046322 1.2e-16 92.0 345 28.7
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-16 92.0 282 27.7
FAN23G0775 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-16 91.7 272 31.2
MD02G1004600 Malus domestica HOM05D006732 ORTHO05D005682 1.5e-16 91.7 286 30.4
FAN05G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.4e-16 90.1 272 29.8
FAN26G1230 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.5e-16 89.4 196 33.7
Prupe.2G176100 Prunus persica HOM05D006732 ORTHO05D005682 6.4e-15 86.3 319 29.2
FvH4_6g28541 Fragaria vesca HOM05D008398 ORTHO05D005682 8.3e-15 85.9 173 37.0
FAN03G2566 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.9e-14 84.7 146 40.4
FAN23G1448 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-14 84.3 278 29.5
Prupe.7G110000 Prunus persica HOM05D006732 ORTHO05D005682 4.1e-14 83.6 306 27.8
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 7.1e-14 82.8 361 27.1
FAN05G1573 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.2e-13 82.0 208 36.5
FAN19G1560 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-13 81.6 154 37.0
Prupe.6G029800 Prunus persica HOM05D006732 ORTHO05D005682 2.1e-13 81.3 167 31.7
RcHm_v2.0_Chr1g0329851 Rosa chinensis HOM05D006732 ORTHO05D005682 3.5e-13 80.5 152 34.2
FvH4_1g03530 Fragaria vesca HOM05D006732 ORTHO05D005682 2.3e-12 77.8 179 33.0
FAN01G2752 Fragaria x ananassa HOM05D008398 ORTHO05D005682 3.0e-12 77.4 178 34.8
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 6.6e-12 76.3 379 27.7
FAN14G2290 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.6e-12 76.3 258 28.7
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 8.6e-12 75.9 236 28.0
FAN03G1279 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.5e-11 75.1 134 39.6
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-11 75.1 373 28.4
FAN26G1044 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-10 71.2 363 27.5
FvH4_7g31320 Fragaria vesca HOM05D010677 ORTHO05D012678 3.6e-10 70.5 239 28.0
FAN19G2470 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-09 68.9 315 26.0
FvH4_4g36820 Fragaria vesca HOM05D008398 ORTHO05D005682 1.4e-09 68.6 250 29.6
FAN28G2932 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-09 67.8 167 31.7
QL02p078454 Quercus lobata HOM05D006732 ORTHO05D005682 5.2e-09 66.6 128 38.3
FAN14G4282 Fragaria x ananassa HOM05D013417 ORTHO05D022618 8.9e-09 65.9 265 26.8
PGR031G0854 Punica granatum HOM05D023452 ORTHO05D019051 1.2e-08 65.5 181 32.0
QL02p081954 Quercus lobata HOM05D006732 ORTHO05D005682 1.2e-08 65.5 281 27.8
FvH4_1g03730 Fragaria vesca HOM05D006732 ORTHO05D005682 2.0e-08 64.7 278 28.1
FAN12G2497 Fragaria x ananassa HOM05D013417 ORTHO05D005682 2.0e-08 64.7 176 29.0
FvH4_6g38540 Fragaria vesca HOM05D006732 ORTHO05D005682 2.6e-08 64.3 180 30.6
FAN12G0321 Fragaria x ananassa HOM05D013417 ORTHO05D005682 3.4e-08 63.9 176 29.0
FAN06G3593 Fragaria x ananassa HOM05D000122 ORTHO05D012678 7.6e-08 62.8 193 29.5
FAN06G4197 Fragaria x ananassa HOM05D000122 ORTHO05D012678 7.6e-08 62.8 193 29.5
FAN02G2570 Fragaria x ananassa HOM05D008398 ORTHO05D005682 9.9e-08 62.4 187 32.1
FAN15G3012 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.3e-07 62.0 213 29.6
FAN14G3968 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.7e-07 61.6 177 33.3
PGR044G2517 Punica granatum HOM05D023452 ORTHO05D019051 6.4e-07 59.7 128 33.6
FAN04G2845 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.1e-06 58.9 265 27.5
FvH4_4g12220 Fragaria vesca HOM05D013417 ORTHO05D022618 1.4e-06 58.5 185 31.4
FAN12G2010 Fragaria x ananassa HOM05D013417 ORTHO05D022618 1.4e-06 58.5 185 31.4
FAN12G2017 Fragaria x ananassa HOM05D013417 ORTHO05D022618 1.4e-06 58.5 185 31.4
FvH4_5g06100 Fragaria vesca HOM05D008398 ORTHO05D005682 4.1e-06 57.0 104 42.3
Cfa007631 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.4e-06 56.6 124 29.8
RcHm_v2.0_Chr5g0043731 Rosa chinensis HOM05D018501 ORTHO05D020617 9.2e-06 55.8 192 26.6


User provided reference genes

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