Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0376221 Rosa chinensis HOM05D005135 ORTHO05D005810 3.5e-122 441.8 253 100.0
FAN06G3133 Fragaria x ananassa HOM05D005135 ORTHO05D005810 1.7e-116 422.9 253 95.3
FAN06G4903 Fragaria x ananassa HOM05D005135 ORTHO05D005810 3.8e-116 421.8 253 94.9
FAN03G3482 Fragaria x ananassa HOM05D005135 ORTHO05D005810 6.4e-116 421.0 253 94.9
FAN01G0847 Fragaria x ananassa HOM05D005135 ORTHO05D005810 2.3e-113 412.5 253 88.5
FvH4_7g28720 Fragaria vesca HOM05D005135 ORTHO05D005810 3.9e-113 411.8 247 95.1
FAN10G2880 Fragaria x ananassa HOM05D005135 ORTHO05D005810 2.4e-110 402.5 286 78.3
FAN03G1115 Fragaria x ananassa HOM05D005135 ORTHO05D005810 5.8e-101 371.3 305 75.4
Prupe.2G287200 Prunus persica HOM05D005135 ORTHO05D005810 2.2e-87 326.2 252 78.6
MD00G1004200 Malus domestica HOM05D005135 ORTHO05D005810 1.2e-85 320.5 247 78.5
MD01G1193100 Malus domestica HOM05D005135 ORTHO05D005810 5.9e-85 318.2 245 78.0
Dinv35139 Davidia involucrata HOM05D005135 ORTHO05D005810 1.7e-84 316.6 257 68.9
Hma1.2p1_0488F.1_g163940 Hydrangea macrophylla HOM05D005135 ORTHO05D005810 4.6e-82 308.5 261 65.5
CiPaw.03G100200 Carya illinoinensis HOM05D005135 ORTHO05D005810 1.4e-81 307.0 246 67.5
Manes.14G031000 Manihot esculenta HOM05D005135 ORTHO05D005810 1.4e-81 307.0 249 73.5
GSVIVG01018448001 Vitis vinifera HOM05D005135 ORTHO05D005810 2.3e-81 306.2 254 66.5
Thecc.03G166900 Theobroma cacao HOM05D005135 ORTHO05D005810 2.2e-79 299.7 254 66.1
TAR629G2517 Trochodendron aralioides HOM05D005135 ORTHO05D005810 3.7e-79 298.9 255 71.4
Duzib084G0614 Durio zibethinus HOM05D005135 ORTHO05D005810 8.2e-79 297.7 254 63.8
Actinidia31800 Actinidia chinensis HOM05D005135 ORTHO05D005810 3.4e-77 292.4 252 65.1
CSS0048110 Camellia sinensis var. sinensis HOM05D005135 ORTHO05D005810 4.5e-77 292.0 253 65.2
vmacro09870 Vaccinium macrocarpon HOM05D005135 ORTHO05D005810 1.3e-76 290.4 255 62.7
Gohir.D08G104900 Gossypium hirsutum HOM05D005135 ORTHO05D005810 1.7e-76 290.0 254 63.8
Duzib068G0893 Durio zibethinus HOM05D005135 ORTHO05D005810 2.9e-76 289.3 254 63.4
Oeu030142.1 Olea europaea HOM05D005135 ORTHO05D005810 6.5e-76 288.1 252 64.7
Oeu030256.1 Olea europaea HOM05D005135 ORTHO05D005810 8.5e-76 287.7 264 67.8
Oeu022533.1 Olea europaea HOM05D005135 ORTHO05D005810 1.1e-75 287.3 251 62.5
COL.COLO4_14228 Corchorus olitorius HOM05D005135 ORTHO05D005810 1.9e-75 286.6 254 63.0
Gohir.D12G262900 Gossypium hirsutum HOM05D005135 ORTHO05D005810 7.2e-75 284.6 254 62.2
Gohir.A12G262200 Gossypium hirsutum HOM05D005135 ORTHO05D005810 1.2e-74 283.9 254 62.2
Gorai.008G281800 Gossypium raimondii HOM05D005135 ORTHO05D005810 1.2e-74 283.9 254 62.2
MSTRG.8780 Avicennia marina HOM05D005135 ORTHO05D005810 1.6e-74 283.5 258 62.0
Potri.015G135000 Populus trichocarpa HOM05D005135 ORTHO05D005810 1.0e-73 280.8 262 64.1
Glyma.10G240700 Glycine max HOM05D005135 ORTHO05D005810 1.4e-73 280.4 254 63.8
Migut.F01160 Erythranthe guttata HOM05D005135 ORTHO05D005810 5.2e-73 278.5 250 65.2
Gohir.A08G093700 Gossypium hirsutum HOM05D005135 ORTHO05D005810 8.8e-73 277.7 254 61.4
Sed0024541 Sechium edule HOM05D005135 ORTHO05D005810 3.3e-72 275.8 247 63.2
ClCG05G007690 Citrullus lanatus HOM05D005135 ORTHO05D005810 9.7e-72 274.2 250 64.0
MELO3C006858.2 Cucumis melo HOM05D005135 ORTHO05D005810 2.2e-71 273.1 250 64.4
Peaxi162Scf00557g00212 Petunia axillaris HOM05D005135 ORTHO05D005810 2.2e-71 273.1 251 62.5
VMungo0720G1039 Vigna mungo HOM05D005135 ORTHO05D005810 2.2e-71 273.1 254 61.0
Ciclev10005677m.g Citrus clementina HOM05D005135 ORTHO05D005810 6.3e-71 271.6 254 65.0
Phvul.007G065300 Phaseolus vulgaris HOM05D005135 ORTHO05D005810 6.3e-71 271.6 254 61.8
Rhsim03G0174700 Rhododendron simsii HOM05D000559 ORTHO05D000596 6.3e-71 271.6 252 68.3
TWI23G0093 Tripterygium wilfordii HOM05D005135 ORTHO05D005810 6.3e-71 271.6 247 65.6
arahy.Tifrunner.gnm1.ann1.UR3NDK Arachis hypogaea HOM05D005135 ORTHO05D005810 1.8e-70 270.0 253 62.1
Nn1g01287 Nelumbo nucifera HOM05D005135 ORTHO05D005810 1.8e-70 270.0 251 61.0
Eucgr.K00188 Eucalyptus grandis HOM05D005135 ORTHO05D005810 3.1e-70 269.2 259 62.2
unitig_52.g17751 Utricularia gibba HOM05D005135 ORTHO05D005810 3.1e-70 269.2 246 64.2
CAN.G1187.4 Capsicum annuum HOM05D005135 ORTHO05D005810 4.1e-70 268.9 251 61.0
arahy.Tifrunner.gnm1.ann1.3G6IEL Arachis hypogaea HOM05D005135 ORTHO05D005810 1.6e-69 266.9 253 61.7
CsaV3_3G016630 Cucumis sativus L. HOM05D005135 ORTHO05D005810 1.6e-69 266.9 250 63.6
PGSC0003DMG400027379 Solanum tuberosum HOM05D005135 ORTHO05D005810 1.6e-69 266.9 254 60.6
Sopen03g002840 Solanum pennellii HOM05D005135 ORTHO05D005810 2.0e-69 266.5 251 60.6
PSO782G0956 Papaver somniferum HOM05D005135 ORTHO05D005810 3.5e-69 265.8 249 62.2
Sopen11g029970 Solanum pennellii HOM05D005135 ORTHO05D005810 3.5e-69 265.8 257 59.9
Lalb_Chr06g0160891 Lupinus albus HOM05D005135 ORTHO05D005810 4.5e-69 265.4 254 61.0
Nitab4.5_0000205g0180 Nicotiana tabacum HOM05D005135 ORTHO05D005810 4.5e-69 265.4 251 61.4
Sabra15G0147000 Salix brachista HOM05D005135 ORTHO05D005810 4.5e-69 265.4 286 57.3
Solyc03g006850.3 Solanum lycopersicum HOM05D005135 ORTHO05D005810 5.9e-69 265.0 251 60.6
EL10Ac3g05742 Beta vulgaris HOM05D005135 ORTHO05D005810 1.0e-68 264.2 249 59.4
Solyc11g072300.2 Solanum lycopersicum HOM05D005135 ORTHO05D005810 1.7e-68 263.5 263 58.6
TWI39G0390 Tripterygium wilfordii HOM05D005135 ORTHO05D005810 1.7e-68 263.5 246 66.3
CAN.G1182.3 Capsicum annuum HOM05D005135 ORTHO05D005810 3.2e-67 259.2 250 59.6
Ca_10813_v3 Cicer arietinum L. HOM05D005135 ORTHO05D005810 1.2e-66 257.3 250 59.6
Lj5g0000742 Lotus japonicus HOM05D005135 ORTHO05D005810 2.1e-66 256.5 254 60.2
Glyma.20G154000 Glycine max HOM05D005135 ORTHO05D005810 2.7e-66 256.1 253 59.7
Sc13g0008230 Simmondsia chinensis HOM05D005135 ORTHO05D005810 2.7e-66 256.1 253 58.9
Sed0023089 Sechium edule HOM05D005135 ORTHO05D005810 8.0e-66 254.6 257 58.4
Hund04685 Selenicereus undatus HOM05D005135 ORTHO05D005810 1.0e-65 254.2 251 63.3
AUR62021268 Chenopodium quinoa HOM05D005135 ORTHO05D005810 2.3e-65 253.1 256 57.4
A03p16010 Brassica napus HOM05D005135 ORTHO05D005810 3.0e-65 252.7 251 60.6
BraA03t10892Z Brassica rapa HOM05D005135 ORTHO05D005810 6.7e-65 251.5 255 60.8
BolC3t14274H Brassica oleracea HOM05D005135 ORTHO05D005810 1.2e-64 250.8 255 60.8
Aqoxy7G00498 Aquilegia oxysepala HOM05D005135 ORTHO05D005810 1.5e-64 250.4 256 59.4
BcaC01g06140 Brassica carinata HOM05D005135 ORTHO05D005810 1.5e-64 250.4 251 60.6
CDE07G1455 Ceratophyllum demersum HOM05D005135 ORTHO05D005810 1.5e-64 250.4 260 58.5
C03p18840 Brassica napus HOM05D005135 ORTHO05D005810 3.3e-64 249.2 251 60.6
SGA_v2.0_scaffold10G05426 Striga asiatica HOM05D005135 ORTHO05D005810 7.5e-64 248.1 247 60.7
Sp6g14090 Schrenkiella parvula HOM05D005135 ORTHO05D005810 9.7e-64 247.7 248 65.3
Lj1A988G25 Lonicera japonica HOM05D005135 ORTHO05D005810 1.3e-63 247.3 223 65.0
PSO478G0331 Papaver somniferum HOM05D005135 ORTHO05D005810 2.2e-63 246.5 247 60.7
AT5G51840 Arabidopsis thaliana HOM05D005135 ORTHO05D005810 2.8e-63 246.1 253 65.2
BcaB01g04154 Brassica carinata HOM05D005135 ORTHO05D005810 3.7e-63 245.7 245 64.5
Cc02_g03590 Coffea canephora HOM05D005135 ORTHO05D005810 4.8e-63 245.4 254 57.9
Rhsim09G0195100 Rhododendron simsii HOM05D000559 ORTHO05D005810 1.1e-62 244.2 240 59.6
Aa31LG3G8280 Aethionema arabicum HOM05D005135 ORTHO05D005810 1.4e-62 243.8 246 58.9
Ah.07g208790 Amaranthus hybridus HOM05D005135 ORTHO05D005810 1.4e-62 243.8 249 56.2
Psat7g169320 Pisum sativum HOM05D005135 ORTHO05D005810 4.1e-62 242.3 249 59.8
VMungo0464G2082 Vigna mungo HOM05D000559 ORTHO05D005810 4.1e-62 242.3 263 55.5
ATR0661G043 Amborella trichopoda HOM05D005135 ORTHO05D005810 5.3e-62 241.9 251 57.0
Nitab4.5_0001573g0020 Nicotiana tabacum HOM05D005135 ORTHO05D005810 5.3e-62 241.9 242 58.3
SGA_v2.0_scaffold303G47872 Striga asiatica HOM05D005135 ORTHO05D005810 5.3e-62 241.9 317 51.4
ECA238G2105 Erigeron canadensis HOM05D005135 ORTHO05D005810 1.2e-61 240.7 248 56.9
Thhalv10014510m.g Eutrema salsugineum HOM05D005135 ORTHO05D005810 1.2e-61 240.7 254 64.2
Carub.0008s1186 Capsella rubella HOM05D005135 ORTHO05D005810 1.6e-61 240.4 257 63.4
Medtr1g101945 Medicago truncatula HOM05D005135 ORTHO05D005810 1.6e-61 240.4 253 57.3
CARHR264720 Cardamine hirsuta HOM05D005135 ORTHO05D005810 2.7e-61 239.6 250 65.2
BcaB08g35536 Brassica carinata HOM05D005135 ORTHO05D005810 4.5e-61 238.8 246 61.4
vmacro06737 Vaccinium macrocarpon HOM05D005135 ORTHO05D005810 4.5e-61 238.8 374 48.1
TPR.G17397 Trifolium pratense HOM05D005135 ORTHO05D005810 3.8e-60 235.7 224 61.2
HanXRQChr14g0461821 Helianthus annuus HOM05D005135 ORTHO05D005810 1.1e-59 234.2 243 58.4
PGR142G1544 Punica granatum HOM05D005135 ORTHO05D005810 1.1e-59 234.2 253 55.7
AL8G26130 Arabidopsis lyrata HOM05D005135 ORTHO05D005810 1.9e-59 233.4 253 62.8
PGR042G3048 Punica granatum HOM05D005135 ORTHO05D005810 7.2e-59 231.5 150 82.0
Dinv28508 Davidia involucrata HOM05D005135 ORTHO05D005810 4.7e-58 228.8 151 79.5
Zm00001eb027200 Zea mays HOM05D005135 ORTHO05D005810 6.8e-57 224.9 247 55.1
HPP92_001726 Vanilla planifolia HOM05D005135 ORTHO05D005810 2.0e-56 223.4 263 51.7
AUR62016060 Chenopodium quinoa HOM05D005135 ORTHO05D005810 2.6e-56 223.0 272 51.1
HPP92_001719 Vanilla planifolia HOM05D005135 ORTHO05D005810 7.5e-56 221.5 263 51.3
Gohir.D04G141600 Gossypium hirsutum HOM05D005135 ORTHO05D005810 2.8e-55 219.5 151 76.2
Actinidia14214 Actinidia chinensis HOM05D005135 ORTHO05D005810 3.1e-54 216.1 185 66.5
Lsat_1_v5_gn_2_130120 Lactuca sativa HOM05D005135 ORTHO05D005810 1.2e-53 214.2 255 52.9
DCAR_020208 Daucus carota HOM05D005135 ORTHO05D005810 4.5e-53 212.2 220 59.5
Glyma.16G200500 Glycine max HOM05D005135 ORTHO05D005810 4.4e-48 195.7 248 48.0
AagrBONN_evm.TU.Sc2ySwM_117.1266 Anthoceros agrestis HOM05D005135 ORTHO05D005810 3.7e-47 192.6 198 56.6
Haze_13791 Corylus avellana HOM05D005135 ORTHO05D005810 5.9e-45 185.3 267 53.2
Mapoly0096s0072 Marchantia polymorpha HOM05D005135 ORTHO05D005810 1.3e-44 184.1 144 65.3
Actinidia03096 Actinidia chinensis HOM05D005135 ORTHO05D005810 1.2e-42 177.6 192 56.8
Lalb_Chr21g0304891 Lupinus albus HOM05D005135 ORTHO05D005810 2.8e-42 176.4 221 50.7
CDE04G3520 Ceratophyllum demersum HOM05D005135 ORTHO05D005810 3.2e-38 162.9 176 60.8
Pp3c13_17710 Physcomitrium patens HOM05D005135 ORTHO05D005810 1.3e-36 157.5 195 52.3
Potri.012G132832 Populus trichocarpa HOM05D005135 ORTHO05D005810 2.3e-36 156.8 181 54.7
PGSC0003DMG400024247 Solanum tuberosum HOM05D005135 ORTHO05D005810 3.9e-36 156.0 176 53.4
Phvul.004G123300 Phaseolus vulgaris HOM05D005135 ORTHO05D005810 1.4e-33 147.5 248 41.1
Lj8C32T8 Lonicera japonica HOM05D005135 ORTHO05D005810 3.1e-33 146.4 101 74.3
Peaxi162Scf00192g00520 Petunia axillaris HOM05D005135 ORTHO05D005810 6.4e-31 138.7 207 46.9
AL8G30000 Arabidopsis lyrata HOM05D005135 ORTHO05D005810 1.1e-30 137.9 93 75.3
SHI13830 Sapria himalayana HOM05D005135 ORTHO05D005810 1.1e-30 137.9 130 59.2
Lj8A32T30 Lonicera japonica HOM05D005135 ORTHO05D005810 3.5e-29 132.9 180 50.0
BcaC04g20628 Brassica carinata HOM05D005135 ORTHO05D005810 3.5e-21 106.3 228 41.2
Cre16.g661800 Chlamydomonas reinhardtii HOM05D005135 ORTHO05D005810 5.1e-20 102.4 123 46.3
Hund01499 Selenicereus undatus HOM05D000873 ORTHO05D005810 6.2e-18 95.5 106 53.8
TAR291G0007 Trochodendron aralioides HOM05D005135 ORTHO05D005810 4.0e-17 92.8 154 45.5
Os10g0188400 Oryza sativa ssp. japonica HOM05D005135 ORTHO05D005810 1.2e-16 91.3 82 61.0
SHI48584 Sapria himalayana HOM05D005135 ORTHO05D005810 4.4e-16 89.4 155 41.3
Hma1.2p1_3202F.1_g333920 Hydrangea macrophylla HOM05D005135 ORTHO05D005810 7.6e-16 88.6 55 85.5
Cpa.g.sc4.198 Carica papaya HOM05D005135 ORTHO05D005810 1.0e-12 78.2 90 53.3
Potri.012G132766 Populus trichocarpa HOM05D005135 ORTHO05D005810 1.3e-12 77.8 55 69.1
Duzib205G1338 Durio zibethinus HOM05D005135 ORTHO05D005810 1.5e-11 74.3 133 39.8
SMO201G0013 Selaginella moellendorffii HOM05D005135 ORTHO05D005810 4.3e-11 72.8 63 58.7
Duzib205G1376 Durio zibethinus HOM05D005135 ORTHO05D005810 1.2e-10 71.2 100 43.0
SEGI_16349 Sequoiadendron giganteum HOM05D056048 ORTHO05D005810 4.0e-09 66.2 171 31.0
PRCOL_00003096 Prasinoderma coloniale HOM05D005135 ORTHO05D005810 5.8e-08 62.4 95 43.2
C09p41330 Brassica napus HOM05D005135 ORTHO05D005810 4.9e-07 59.3 185 33.0
BolC9t57008H Brassica oleracea HOM05D005135 ORTHO05D005810 4.9e-07 59.3 185 33.0
CDE04G1613 Ceratophyllum demersum HOM05D005135 ORTHO05D005810 3.2e-06 56.6 38 63.2


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