Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0375581 Rosa chinensis HOM05D003568 ORTHO05D004104 2.0e-61 238.8 114 100.0
MD07G1131500 Malus domestica HOM05D003568 ORTHO05D004104 6.6e-28 127.5 94 72.3
SGA_v2.0_scaffold67G22717 Striga asiatica HOM05D003568 ORTHO05D004104 6.6e-28 127.5 94 72.3
TAR374G0165 Trochodendron aralioides HOM05D003568 ORTHO05D004104 6.6e-28 127.5 94 72.3
Oeu015218.3 Olea europaea HOM05D003568 ORTHO05D004104 8.6e-28 127.1 94 71.3
Dinv27398 Davidia involucrata HOM05D003568 ORTHO05D004104 1.5e-27 126.3 94 71.3
Duzib205G0971 Durio zibethinus HOM05D003568 ORTHO05D004104 1.5e-27 126.3 94 71.3
Migut.N01148 Erythranthe guttata HOM05D003568 ORTHO05D004104 1.5e-27 126.3 94 72.3
Manes.05G029701 Manihot esculenta HOM05D003568 ORTHO05D004104 1.5e-27 126.3 91 73.6
TWI59G1008 Tripterygium wilfordii HOM05D003568 ORTHO05D004104 1.5e-27 126.3 94 71.3
CANSAT56G2290 Cannabis sativa HOM05D003568 ORTHO05D004104 1.9e-27 125.9 94 71.3
FvH4_7g15330 Fragaria vesca HOM05D003568 ORTHO05D004104 1.9e-27 125.9 94 71.3
FAN01G2394 Fragaria x ananassa HOM05D003568 ORTHO05D004104 1.9e-27 125.9 94 71.3
FAN03G0275 Fragaria x ananassa HOM05D003568 ORTHO05D004104 1.9e-27 125.9 94 71.3
FAN06G0334 Fragaria x ananassa HOM05D003568 ORTHO05D004104 1.9e-27 125.9 94 71.3
FAN06G4614 Fragaria x ananassa HOM05D003568 ORTHO05D004104 1.9e-27 125.9 94 71.3
FAN10G2437 Fragaria x ananassa HOM05D003568 ORTHO05D004104 1.9e-27 125.9 94 71.3
Prupe.2G177200 Prunus persica HOM05D003568 ORTHO05D004104 1.9e-27 125.9 91 74.7
RcHm_v2.0_Chr1g0357661 Rosa chinensis HOM05D003568 ORTHO05D004104 1.9e-27 125.9 94 71.3
FAN10G2647 Fragaria x ananassa HOM05D003568 ORTHO05D004104 3.3e-27 125.2 94 70.2
MD01G1071200 Malus domestica HOM05D003568 ORTHO05D004104 3.3e-27 125.2 94 71.3
THA.LOC104811828 Tarenaya hassleriana HOM05D003568 ORTHO05D004104 3.3e-27 125.2 91 72.5
Aqoxy2G00934 Aquilegia oxysepala HOM05D003568 ORTHO05D004104 4.3e-27 124.8 96 69.8
ClCG05G001260 Citrullus lanatus HOM05D003568 ORTHO05D004104 4.3e-27 124.8 91 73.6
MELO3C006082.2 Cucumis melo HOM05D003568 ORTHO05D004104 4.3e-27 124.8 91 73.6
CsaV3_3G008620 Cucumis sativus L. HOM05D003568 ORTHO05D004104 4.3e-27 124.8 91 73.6
Sed0024683 Sechium edule HOM05D003568 ORTHO05D004104 4.3e-27 124.8 91 73.6
COL.COLO4_15385 Corchorus olitorius HOM05D003568 ORTHO05D004104 5.6e-27 124.4 94 70.2
Nn1g01682 Nelumbo nucifera HOM05D003568 ORTHO05D004104 5.6e-27 124.4 96 68.8
CSS0027239 Camellia sinensis var. sinensis HOM05D003568 ORTHO05D004104 7.3e-27 124.0 94 70.2
Gohir.D12G276500 Gossypium hirsutum HOM05D003568 ORTHO05D004104 7.3e-27 124.0 94 70.2
Gorai.008G297000 Gossypium raimondii HOM05D003568 ORTHO05D004104 7.3e-27 124.0 94 70.2
Potri.002G164100 Populus trichocarpa HOM05D003568 ORTHO05D004104 7.3e-27 124.0 91 72.5
Duzib068G0821 Durio zibethinus HOM05D003568 ORTHO05D004104 9.6e-27 123.6 94 70.2
Manes.01G252500 Manihot esculenta HOM05D003568 ORTHO05D004104 9.6e-27 123.6 91 72.5
Rhsim07G0010700 Rhododendron simsii HOM05D003568 ORTHO05D004104 9.6e-27 123.6 94 70.2
vmacro13231 Vaccinium macrocarpon HOM05D003568 ORTHO05D004104 9.6e-27 123.6 94 70.2
Cpa.g.sc184.32 Carica papaya HOM05D003568 ORTHO05D004104 1.2e-26 123.2 91 73.6
Cc08_g01740 Coffea canephora HOM05D003568 ORTHO05D004104 1.2e-26 123.2 94 69.1
Sed0000810 Sechium edule HOM05D003568 ORTHO05D004104 1.2e-26 123.2 91 73.6
QL04p055468 Quercus lobata HOM05D003568 ORTHO05D004104 1.6e-26 122.9 91 72.5
TAR375G0541 Trochodendron aralioides HOM05D003568 ORTHO05D004104 1.6e-26 122.9 94 69.1
GSVIVG01026964001 Vitis vinifera HOM05D003568 ORTHO05D004104 1.6e-26 122.9 91 71.4
Gohir.A12G275800 Gossypium hirsutum HOM05D003568 ORTHO05D004104 2.1e-26 122.5 94 69.1
Medtr8g023330 Medicago truncatula HOM05D003568 ORTHO05D004104 2.1e-26 122.5 93 69.9
Nitab4.5_0000171g0380 Nicotiana tabacum HOM05D003568 ORTHO05D004104 2.8e-26 122.1 94 68.1
Thecc.03G000600 Theobroma cacao HOM05D003568 ORTHO05D004104 2.8e-26 122.1 94 70.2
Thecc.06G000300 Theobroma cacao HOM05D003568 ORTHO05D004104 2.8e-26 122.1 94 70.2
Peaxi162Scf00073g02118 Petunia axillaris HOM05D003568 ORTHO05D004104 3.6e-26 121.7 94 68.1
MSTRG.27756 Avicennia marina HOM05D003568 ORTHO05D004104 4.7e-26 121.3 94 69.1
Ca_23448_v3 Cicer arietinum L. HOM05D003568 ORTHO05D004104 4.7e-26 121.3 93 69.9
Atru.chr5.561 Acer truncatum HOM05D003568 ORTHO05D004104 6.2e-26 120.9 91 70.3
Atru.chr5.579 Acer truncatum HOM05D003568 ORTHO05D004104 6.2e-26 120.9 91 70.3
ECA236G4463 Erigeron canadensis HOM05D003568 ORTHO05D004104 6.2e-26 120.9 96 66.7
HanXRQChr04g0120781 Helianthus annuus HOM05D003568 ORTHO05D004104 6.2e-26 120.9 96 66.7
Nn6g35074 Nelumbo nucifera HOM05D003568 ORTHO05D004104 6.2e-26 120.9 94 69.1
PGR042G3260 Punica granatum HOM05D003568 ORTHO05D004104 6.2e-26 120.9 97 68.0
Sabra02G0147000 Salix brachista HOM05D003568 ORTHO05D004104 6.2e-26 120.9 91 72.5
AUR62030738 Chenopodium quinoa HOM05D003568 ORTHO05D004104 8.1e-26 120.6 91 71.4
AUR62036376 Chenopodium quinoa HOM05D003568 ORTHO05D004104 8.1e-26 120.6 91 71.4
DCAR_006948 Daucus carota HOM05D003568 ORTHO05D004104 8.1e-26 120.6 94 67.0
Dinv09575 Davidia involucrata HOM05D003568 ORTHO05D004104 8.1e-26 120.6 94 69.1
Nitab4.5_0010629g0020 Nicotiana tabacum HOM05D003568 ORTHO05D004104 8.1e-26 120.6 93 69.9
Glyma.07G046100 Glycine max HOM05D003568 ORTHO05D004104 1.1e-25 120.2 93 69.9
Glyma.16G014200 Glycine max HOM05D003568 ORTHO05D004104 1.1e-25 120.2 93 69.9
Nitab4.5_0006926g0010 Nicotiana tabacum HOM05D003568 ORTHO05D004104 1.1e-25 120.2 94 67.0
PSO266G0033 Papaver somniferum HOM05D003568 ORTHO05D004104 1.1e-25 120.2 96 67.7
PSO478G3452 Papaver somniferum HOM05D003568 ORTHO05D004104 1.1e-25 120.2 96 67.7
VMungo0331G1030 Vigna mungo HOM05D003568 ORTHO05D004104 1.1e-25 120.2 93 69.9
Ah.12g059250 Amaranthus hybridus HOM05D003568 ORTHO05D004104 1.4e-25 119.8 91 70.3
Lj7A507T47 Lonicera japonica HOM05D003568 ORTHO05D004104 1.4e-25 119.8 91 70.3
Lj9A588G62 Lonicera japonica HOM05D003568 ORTHO05D004104 1.8e-25 119.4 93 68.8
Ciclev10018853m.g Citrus clementina HOM05D003568 ORTHO05D004104 2.4e-25 119.0 91 69.2
Potri.014G090100 Populus trichocarpa HOM05D003568 ORTHO05D004104 2.4e-25 119.0 91 70.3
Eucgr.E00099 Eucalyptus grandis HOM05D003568 ORTHO05D004104 3.1e-25 118.6 97 66.0
CAN.G165.6 Capsicum annuum HOM05D003568 ORTHO05D004104 4.0e-25 118.2 94 66.0
Solyc03g095410.3 Solanum lycopersicum HOM05D003568 ORTHO05D004104 4.0e-25 118.2 94 66.0
PGSC0003DMG400005252 Solanum tuberosum HOM05D003568 ORTHO05D004104 4.0e-25 118.2 94 66.0
Lalb_Chr18g0044861 Lupinus albus HOM05D003568 ORTHO05D004104 5.2e-25 117.9 91 69.2
Peaxi162Scf00154g00427 Petunia axillaris HOM05D003568 ORTHO05D004104 5.2e-25 117.9 93 67.7
Phvul.010G123000 Phaseolus vulgaris HOM05D003568 ORTHO05D004104 5.2e-25 117.9 93 68.8
arahy.Tifrunner.gnm1.ann1.PRYL24 Arachis hypogaea HOM05D003568 ORTHO05D004104 6.9e-25 117.5 91 70.3
arahy.Tifrunner.gnm1.ann1.Z56S5U Arachis hypogaea HOM05D003568 ORTHO05D004104 6.9e-25 117.5 91 70.3
SalBow6G0922 Salvia bowleyana HOM05D003568 ORTHO05D004104 6.9e-25 117.5 91 69.2
SalBow6G4826 Salvia bowleyana HOM05D003568 ORTHO05D004104 6.9e-25 117.5 91 69.2
Sc03g0008850 Simmondsia chinensis HOM05D003568 ORTHO05D004104 6.9e-25 117.5 93 67.7
EL10Ac5g12970 Beta vulgaris HOM05D003568 ORTHO05D004104 8.9e-25 117.1 91 69.2
CAN.G45.13 Capsicum annuum HOM05D003568 ORTHO05D004104 8.9e-25 117.1 93 68.8
Lalb_Chr17g0343201 Lupinus albus HOM05D003568 ORTHO05D004104 8.9e-25 117.1 90 70.0
Solyc11g050710.2 Solanum lycopersicum HOM05D003568 ORTHO05D004104 8.9e-25 117.1 93 68.8
Sopen11g021810 Solanum pennellii HOM05D003568 ORTHO05D004104 8.9e-25 117.1 93 68.8
Sopen03g025390 Solanum pennellii HOM05D003568 ORTHO05D004104 1.2e-24 116.7 94 64.9
Aa31LG3G14860 Aethionema arabicum HOM05D003568 ORTHO05D004104 1.5e-24 116.3 91 69.2
A10p25450 Brassica napus HOM05D003568 ORTHO05D004104 1.5e-24 116.3 91 70.3
BolC9t59286H Brassica oleracea HOM05D003568 ORTHO05D004104 1.5e-24 116.3 91 70.3
BraA10t44609Z Brassica rapa HOM05D003568 ORTHO05D004104 1.5e-24 116.3 91 70.3
CiPaw.02G034600 Carya illinoinensis HOM05D003568 ORTHO05D004104 1.5e-24 116.3 91 68.1
Lj3g0009129 Lotus japonicus HOM05D003568 ORTHO05D004104 1.5e-24 116.3 93 67.7
Sp6g31270 Schrenkiella parvula HOM05D003568 ORTHO05D004104 1.5e-24 116.3 91 70.3
unitig_21.g20340 Utricularia gibba HOM05D003568 ORTHO05D004104 2.0e-24 115.9 92 68.5
AL6G23170 Arabidopsis lyrata HOM05D003568 ORTHO05D004104 2.6e-24 115.5 91 68.1
C09p64520 Brassica napus HOM05D003568 ORTHO05D004104 2.6e-24 115.5 91 70.3
TPR.G21815 Trifolium pratense HOM05D003568 ORTHO05D004104 2.6e-24 115.5 93 66.7
ATR0829G125 Amborella trichopoda HOM05D003568 ORTHO05D004104 5.8e-24 114.4 94 63.8
Carub.0006s1087 Capsella rubella HOM05D003568 ORTHO05D004104 5.8e-24 114.4 91 67.0
Solyc10g019110.2 Solanum lycopersicum HOM05D003568 ORTHO05D004104 7.6e-24 114.0 93 66.7
BcaB01g05405 Brassica carinata HOM05D003568 ORTHO05D004104 9.9e-24 113.6 91 68.1
Gohir.D09G046200 Gossypium hirsutum HOM05D003568 ORTHO05D004104 9.9e-24 113.6 94 62.8
Gorai.006G064200 Gossypium raimondii HOM05D003568 ORTHO05D004104 9.9e-24 113.6 94 62.8
Hund02118 Selenicereus undatus HOM05D003568 ORTHO05D004104 1.3e-23 113.2 90 67.8
CDE07G1174 Ceratophyllum demersum HOM05D003568 ORTHO05D004104 1.7e-23 112.8 94 63.8
AT5G12370 Arabidopsis thaliana HOM05D003568 ORTHO05D004104 2.2e-23 112.5 91 67.0
A03p05590 Brassica napus HOM05D003568 ORTHO05D004104 2.2e-23 112.5 91 67.0
C03p06540 Brassica napus HOM05D003568 ORTHO05D004104 2.2e-23 112.5 91 67.0
BolC3t13154H Brassica oleracea HOM05D003568 ORTHO05D004104 2.2e-23 112.5 91 67.0
BraA03t09896Z Brassica rapa HOM05D003568 ORTHO05D004104 2.2e-23 112.5 91 67.0
Thhalv10012686m.g Eutrema salsugineum HOM05D003568 ORTHO05D004104 3.8e-23 111.7 91 65.9
CSS0021365 Camellia sinensis var. sinensis HOM05D003568 ORTHO05D004104 4.9e-23 111.3 94 64.9
CSS0044044 Camellia sinensis var. sinensis HOM05D003568 ORTHO05D004104 4.9e-23 111.3 94 64.9
CARHR200740 Cardamine hirsuta HOM05D003568 ORTHO05D004104 6.4e-23 110.9 91 64.8
Sabra14G0065400 Salix brachista HOM05D003568 ORTHO05D004104 8.4e-23 110.5 102 62.7
Sed0017270 Sechium edule HOM05D003568 ORTHO05D004104 1.1e-22 110.2 91 65.9
MBI03_g34513_MAGBIO Magnolia biondii HOM05D003568 ORTHO05D004104 1.4e-22 109.8 91 64.8
Os12g0238100 Oryza sativa ssp. japonica HOM05D003568 ORTHO05D004104 3.2e-22 108.6 91 63.7
Zm00001eb133590 Zea mays HOM05D003568 ORTHO05D004104 3.2e-22 108.6 91 63.7
SEGI_32899 Sequoiadendron giganteum HOM05D003568 ORTHO05D004104 2.7e-21 105.5 90 62.2
ECA238G2843 Erigeron canadensis HOM05D003568 ORTHO05D004104 3.9e-20 101.7 89 62.9
HPP92_003241 Vanilla planifolia HOM05D003568 ORTHO05D004104 5.1e-20 101.3 90 61.1
Lsat_1_v5_gn_3_138540 Lactuca sativa HOM05D003568 ORTHO05D004104 1.1e-19 100.1 89 60.7
AagrBONN_evm.TU.Sc2ySwM_117.807 Anthoceros agrestis HOM05D003568 ORTHO05D004104 1.5e-19 99.8 90 57.8
HanXRQChr02g0038861 Helianthus annuus HOM05D003568 ORTHO05D004104 1.9e-19 99.4 89 61.8
HanXRQChr13g0415591 Helianthus annuus HOM05D003568 ORTHO05D004104 5.6e-19 97.8 89 60.7
Psat3g201360 Pisum sativum HOM05D003568 ORTHO05D004104 5.6e-19 97.8 97 57.7
Sopen10g009080 Solanum pennellii HOM05D003568 ORTHO05D004104 1.3e-18 96.7 82 68.3
Mapoly0070s0084 Marchantia polymorpha HOM05D003568 ORTHO05D004104 1.6e-18 96.3 89 57.3
Hund23292 Selenicereus undatus HOM05D003568 ORTHO05D004104 1.6e-18 96.3 78 69.2
Gohir.A09G045200 Gossypium hirsutum HOM05D003568 ORTHO05D004104 2.1e-18 95.9 81 65.4
Haze_15562 Corylus avellana HOM05D003568 ORTHO05D004104 2.8e-18 95.5 157 42.7
Sopen10g009060 Solanum pennellii HOM05D003568 ORTHO05D004104 3.6e-18 95.1 82 67.1
Lsat_1_v5_gn_7_3960 Lactuca sativa HOM05D003568 ORTHO05D004104 1.1e-17 93.6 83 61.4
Pp3c17_2120 Physcomitrium patens HOM05D003568 ORTHO05D004104 1.8e-17 92.8 90 53.3
Solyc10g019130.3 Solanum lycopersicum HOM05D003568 ORTHO05D004104 5.8e-16 87.8 80 65.0
SEGI_22298 Sequoiadendron giganteum HOM05D003568 ORTHO05D004104 2.9e-15 85.5 78 60.3
Sopen10g009040 Solanum pennellii HOM05D003568 ORTHO05D004104 3.2e-14 82.0 89 59.6
AagrBONN_evm.TU.Sc2ySwM_362.1439 Anthoceros agrestis HOM05D003568 ORTHO05D004104 1.6e-13 79.7 88 50.0
CAN.G77.8 Capsicum annuum HOM05D003568 ORTHO05D004104 1.6e-13 79.7 105 49.5
SMO329G0014 Selaginella moellendorffii HOM05D003568 ORTHO05D004104 2.1e-13 79.3 90 48.9
Sopen10g009070 Solanum pennellii HOM05D003568 ORTHO05D004104 2.3e-12 75.9 66 68.2
Psat4g164920 Pisum sativum HOM05D003568 ORTHO05D004104 3.0e-12 75.5 92 46.7
Pp3c10_23750 Physcomitrium patens HOM05D003568 ORTHO05D004104 4.8e-10 68.2 89 43.8
Pp3c7_5960 Physcomitrium patens HOM05D003568 ORTHO05D004104 2.2e-07 59.3 67 47.8
Oeu036591.1 Olea europaea HOM05D003568 ORTHO05D004104 2.9e-07 58.9 44 68.2


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