Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 7.2e-87 323.9 171 100.0
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 5.9e-73 277.7 173 89.6
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 1.3e-72 276.6 173 89.6
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 3.3e-71 271.9 174 87.9
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 3.3e-71 271.9 174 87.9
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.6e-68 262.3 174 85.1
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.4e-68 261.5 174 85.1
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 6.0e-65 251.1 174 81.6
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 5.6e-55 218.0 169 67.5
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 1.2e-44 183.7 185 58.9
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 1.7e-43 179.9 167 61.7
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 2.4e-42 176.0 179 58.1
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 9.3e-42 174.1 173 60.1
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 1.6e-41 173.3 179 57.0
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 3.5e-41 172.2 173 60.1
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 3.5e-41 172.2 173 60.1
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 3.5e-41 172.2 173 60.1
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 6.0e-41 171.4 175 54.9
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 1.3e-40 170.2 175 56.0
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 1.3e-40 170.2 175 56.6
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 1.7e-40 169.9 160 60.6
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 2.3e-40 169.5 168 59.5
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 3.0e-40 169.1 181 55.8
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 3.0e-40 169.1 179 55.9
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 3.9e-40 168.7 185 53.5
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 1.9e-39 166.4 181 55.2
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 1.3e-38 163.7 104 75.0
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 2.1e-38 162.9 104 74.0
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 2.1e-38 162.9 104 74.0
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 3.6e-38 162.2 141 62.4
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 6.2e-38 161.4 178 53.4
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 1.1e-37 160.6 171 55.6
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 1.4e-37 160.2 173 57.2
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 1.4e-37 160.2 180 52.2
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 2.4e-37 159.5 166 55.4
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 2.4e-37 159.5 185 51.9
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 5.3e-37 158.3 170 55.3
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 9.0e-37 157.5 165 55.8
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 1.2e-36 157.1 178 53.4
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 1.2e-36 157.1 106 73.6
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 1.5e-36 156.8 109 69.7
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 2.6e-36 156.0 189 52.9
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 2.6e-36 156.0 189 51.9
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 2.6e-36 156.0 169 55.6
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 3.4e-36 155.6 138 59.4
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 3.4e-36 155.6 148 56.1
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 4.4e-36 155.2 175 52.6
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 5.8e-36 154.8 175 53.1
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 9.9e-36 154.1 121 65.3
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 1.7e-35 153.3 166 54.2
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 1.1e-34 150.6 107 70.1
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 2.4e-34 149.4 118 63.6
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 4.2e-34 148.7 179 48.6
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 2.1e-33 146.4 164 50.0
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 2.1e-33 146.4 160 52.5
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 6.0e-33 144.8 146 56.2
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 7.8e-33 144.4 170 52.9
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 7.8e-33 144.4 182 46.2
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 1.0e-32 144.1 156 53.2
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 1.3e-32 143.7 162 51.9
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 1.7e-32 143.3 101 69.3
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 2.3e-32 142.9 134 57.5
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 2.3e-32 142.9 185 51.9
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 3.0e-32 142.5 173 49.7
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 5.1e-32 141.7 166 50.0
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 5.1e-32 141.7 133 57.1
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 5.1e-32 141.7 157 52.9
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 8.7e-32 141.0 168 50.0
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 1.1e-31 140.6 152 54.6
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 1.9e-31 139.8 160 50.0
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 2.5e-31 139.4 176 47.7
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 3.3e-31 139.0 149 51.7
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 7.3e-31 137.9 173 48.0
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 9.6e-31 137.5 109 60.6
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 9.6e-31 137.5 126 57.9
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 2.8e-30 136.0 125 53.6
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 2.8e-30 136.0 110 60.0
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 3.6e-30 135.6 110 60.0
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 4.8e-30 135.2 142 54.9
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 1.8e-29 133.3 129 59.7
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 4.0e-29 132.1 164 47.0
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 5.3e-29 131.7 133 54.1
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 8.4e-27 124.4 85 69.4
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 1.4e-26 123.6 113 54.0
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 4.2e-26 122.1 113 53.1
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 5.4e-26 121.7 124 59.7
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 1.2e-25 120.6 101 54.5
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 1.8e-24 116.7 138 51.4
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 8.1e-22 107.8 151 44.4
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 9.0e-21 104.4 177 41.8
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 2.0e-20 103.2 177 36.7
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 4.5e-20 102.1 111 51.4
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 2.5e-18 96.3 148 43.9
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 1.6e-17 93.6 111 46.8
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 1.0e-16 90.9 117 48.7
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 1.0e-16 90.9 117 48.7
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 2.3e-16 89.7 53 75.5
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 3.9e-16 89.0 115 47.8
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 9.6e-15 84.3 133 40.6
FAN17G2597 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.1e-14 83.2 112 51.8
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 1.1e-13 80.9 91 45.1
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 4.1e-13 79.0 44 75.0
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 5.3e-13 78.6 139 47.5
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 1.0e-11 74.3 137 40.9
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 5.5e-10 68.6 128 39.8
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 3.5e-09 65.9 134 35.8
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 6.7e-08 61.6 58 55.2
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.9e-07 60.1 61 52.5


User provided reference genes

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