Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0374151 Rosa chinensis HOM05D004234 ORTHO05D004670 3.7e-202 708.0 351 100.0
FvH4_7g27310 Fragaria vesca HOM05D004234 ORTHO05D004670 1.6e-181 639.4 350 90.0
FAN06G0557 Fragaria x ananassa HOM05D004234 ORTHO05D004670 3.7e-178 628.2 350 88.9
FAN03G0204 Fragaria x ananassa HOM05D004234 ORTHO05D004670 5.3e-169 597.8 362 83.7
FAN06G1565 Fragaria x ananassa HOM05D004234 ORTHO05D004670 3.5e-160 568.5 311 90.4
FAN10G3280 Fragaria x ananassa HOM05D002503 ORTHO05D004670 4.8e-154 548.1 314 88.2
FAN03G2107 Fragaria x ananassa HOM05D002503 ORTHO05D004670 2.4e-153 545.8 314 87.3
Prupe.2G276100 Prunus persica HOM05D004234 ORTHO05D004670 1.4e-140 503.4 384 68.0
Hma1.2p1_0432F.1_g151850 Hydrangea macrophylla HOM05D004234 ORTHO05D004670 5.4e-137 491.5 407 61.7
Manes.06G133800 Manihot esculenta HOM05D004234 ORTHO05D004670 5.4e-137 491.5 409 62.1
RcHm_v2.0_Chr1g0331961 Rosa chinensis HOM05D004234 ORTHO05D004670 7.0e-137 491.1 397 63.0
FvH4_7g05310 Fragaria vesca HOM05D004234 ORTHO05D004670 7.8e-136 487.6 381 65.4
FAN03G3162 Fragaria x ananassa HOM05D004234 ORTHO05D004670 7.8e-136 487.6 381 65.4
TWI39G0359 Tripterygium wilfordii HOM05D004234 ORTHO05D004670 1.7e-135 486.5 412 61.7
Potri.001G125700 Populus trichocarpa HOM05D004234 ORTHO05D004670 2.9e-135 485.7 409 61.6
MD07G1252600 Malus domestica HOM05D004234 ORTHO05D004670 3.9e-135 485.3 371 68.2
QL09p005405 Quercus lobata HOM05D004234 ORTHO05D004670 8.6e-135 484.2 411 60.6
FAN10G4258 Fragaria x ananassa HOM05D004234 ORTHO05D004670 1.1e-134 483.8 381 64.8
Thecc.03G153900 Theobroma cacao HOM05D004234 ORTHO05D004670 1.9e-134 483.0 409 61.9
Potri.003G108000 Populus trichocarpa HOM05D004234 ORTHO05D004670 9.5e-134 480.7 408 60.5
Sopen03g024080 Solanum pennellii HOM05D004234 ORTHO05D004670 2.1e-133 479.6 402 60.9
Prupe.2G276000 Prunus persica HOM05D004234 ORTHO05D004670 3.6e-133 478.8 407 61.2
GSVIVG01014047001 Vitis vinifera HOM05D004234 ORTHO05D004670 4.7e-133 478.4 411 60.1
Solyc03g093300.3 Solanum lycopersicum HOM05D004234 ORTHO05D004670 6.1e-133 478.0 402 60.9
Dinv06568 Davidia involucrata HOM05D004234 ORTHO05D004670 8.0e-133 477.6 407 60.4
MD07G1252500 Malus domestica HOM05D004234 ORTHO05D004670 1.0e-132 477.2 405 61.5
CSS0018772 Camellia sinensis var. sinensis HOM05D004234 ORTHO05D004670 1.8e-132 476.5 407 60.0
MD01G1182200 Malus domestica HOM05D004234 ORTHO05D004670 1.8e-132 476.5 403 61.8
Gohir.D03G106600 Gossypium hirsutum HOM05D004234 ORTHO05D004670 6.8e-132 474.6 401 61.1
Lj1A979T78 Lonicera japonica HOM05D004234 ORTHO05D004670 6.8e-132 474.6 407 60.0
Gohir.A03G059300 Gossypium hirsutum HOM05D004234 ORTHO05D004670 1.2e-131 473.8 400 61.5
Actinidia13581 Actinidia chinensis HOM05D004234 ORTHO05D004670 9.8e-131 470.7 410 60.0
Atru.chr1.756 Acer truncatum HOM05D004234 ORTHO05D004670 1.7e-130 469.9 405 60.5
Ciclev10004769m.g Citrus clementina HOM05D004234 ORTHO05D004670 1.7e-130 469.9 404 61.1
Nn6g33942 Nelumbo nucifera HOM05D004234 ORTHO05D004670 2.9e-130 469.2 409 59.2
Actinidia31776 Actinidia chinensis HOM05D004234 ORTHO05D004670 3.7e-130 468.8 409 59.9
Aqoxy5G04150 Aquilegia oxysepala HOM05D004234 ORTHO05D004670 3.7e-130 468.8 412 59.2
Aqoxy1G01638 Aquilegia oxysepala HOM05D004234 ORTHO05D004670 8.3e-130 467.6 412 59.0
Oeu028187.2 Olea europaea HOM05D004234 ORTHO05D004670 8.3e-130 467.6 412 60.2
CsaV3_3G050070 Cucumis sativus L. HOM05D004234 ORTHO05D004670 1.1e-129 467.2 411 59.4
Sed0010040 Sechium edule HOM05D004234 ORTHO05D004670 1.1e-129 467.2 408 59.3
Lj3g0001566 Lotus japonicus HOM05D004234 ORTHO05D004670 2.4e-129 466.1 400 61.5
Lalb_Chr01g0000341 Lupinus albus HOM05D004234 ORTHO05D004670 3.2e-129 465.7 403 60.5
Sabra03G0074900 Salix brachista HOM05D004234 ORTHO05D004670 3.2e-129 465.7 397 59.7
arahy.Tifrunner.gnm1.ann1.WXBJ4D Arachis hypogaea HOM05D004234 ORTHO05D004670 4.1e-129 465.3 405 59.0
Medtr4g036835 Medicago truncatula HOM05D004234 ORTHO05D004670 4.1e-129 465.3 406 59.4
arahy.Tifrunner.gnm1.ann1.11333K Arachis hypogaea HOM05D004234 ORTHO05D004670 5.4e-129 464.9 409 58.9
Migut.F00484 Erythranthe guttata HOM05D004234 ORTHO05D004670 5.4e-129 464.9 418 58.4
PSO238G0034 Papaver somniferum HOM05D004234 ORTHO05D004670 5.4e-129 464.9 408 58.6
Glyma.09G229600 Glycine max HOM05D004234 ORTHO05D004670 7.0e-129 464.5 399 60.7
VMungo1127G0923 Vigna mungo HOM05D004234 ORTHO05D004670 7.0e-129 464.5 398 60.6
ECA233G5771 Erigeron canadensis HOM05D004234 ORTHO05D004670 9.2e-129 464.2 400 60.0
unitig_46.g18765 Utricularia gibba HOM05D004234 ORTHO05D004670 1.6e-128 463.4 403 60.0
Lsat_1_v5_gn_9_51980 Lactuca sativa HOM05D004234 ORTHO05D004670 2.0e-128 463.0 351 65.2
TAR636G1879 Trochodendron aralioides HOM05D004234 ORTHO05D004670 2.0e-128 463.0 411 58.4
COL.COLO4_14105 Corchorus olitorius HOM05D004234 ORTHO05D004670 2.7e-128 462.6 395 61.3
Lsat_1_v5_gn_1_117561 Lactuca sativa HOM05D004234 ORTHO05D004670 3.5e-128 462.2 361 63.4
HPP92_020352 Vanilla planifolia HOM05D004234 ORTHO05D004670 3.5e-128 462.2 407 60.2
Gohir.A12G198000 Gossypium hirsutum HOM05D004234 ORTHO05D004670 1.0e-127 460.7 397 59.9
Carub.0008s2213 Capsella rubella HOM05D004234 ORTHO05D004670 1.7e-127 459.9 395 57.5
AT5G61450 Arabidopsis thaliana HOM05D004234 ORTHO05D004670 2.3e-127 459.5 399 57.1
DCAR_014620 Daucus carota HOM05D004234 ORTHO05D004670 2.3e-127 459.5 395 59.0
HanXRQChr05g0142531 Helianthus annuus HOM05D004234 ORTHO05D004670 3.0e-127 459.1 399 59.6
Psat7g159560 Pisum sativum HOM05D004234 ORTHO05D004670 3.0e-127 459.1 414 59.2
PGR042G3222 Punica granatum HOM05D004234 ORTHO05D004670 3.0e-127 459.1 412 59.7
Gohir.D12G200600 Gossypium hirsutum HOM05D004234 ORTHO05D004670 3.9e-127 458.8 397 59.7
Gorai.008G215700 Gossypium raimondii HOM05D004234 ORTHO05D004670 3.9e-127 458.8 397 59.7
Cc02_g04370 Coffea canephora HOM05D004234 ORTHO05D004670 6.6e-127 458.0 400 59.8
Peaxi162Scf00241g00030 Petunia axillaris HOM05D004234 ORTHO05D004670 8.6e-127 457.6 431 56.4
ClCG09G013080 Citrullus lanatus HOM05D004234 ORTHO05D004670 1.1e-126 457.2 426 57.7
Phvul.011G007500 Phaseolus vulgaris HOM05D004234 ORTHO05D004670 1.5e-126 456.8 407 59.2
SalBow8G0184 Salvia bowleyana HOM05D004234 ORTHO05D004670 1.9e-126 456.4 405 59.8
SalBow8G4519 Salvia bowleyana HOM05D004234 ORTHO05D004670 1.9e-126 456.4 405 59.8
Duzib084G1335 Durio zibethinus HOM05D004234 ORTHO05D004670 2.5e-126 456.1 393 60.6
Gorai.003G113100 Gossypium raimondii HOM05D004234 ORTHO05D004670 3.3e-126 455.7 388 60.8
Thhalv10004229m.g Eutrema salsugineum HOM05D004234 ORTHO05D004670 4.3e-126 455.3 402 57.0
Sc19g0002070 Simmondsia chinensis HOM05D004234 ORTHO05D004670 4.3e-126 455.3 394 60.2
BcaC06g33149 Brassica carinata HOM05D004234 ORTHO05D004670 5.6e-126 454.9 396 56.6
A03p47040 Brassica napus HOM05D004234 ORTHO05D004670 1.2e-125 453.8 400 57.5
C07p45120 Brassica napus HOM05D004234 ORTHO05D004670 1.2e-125 453.8 395 57.7
BraA03t13827Z Brassica rapa HOM05D004234 ORTHO05D004670 1.2e-125 453.8 400 57.5
ATR0317G048 Amborella trichopoda HOM05D004234 ORTHO05D004670 1.6e-125 453.4 412 58.5
BcaC06g33234 Brassica carinata HOM05D004234 ORTHO05D004670 3.6e-125 452.2 395 57.5
BolC7t45034H Brassica oleracea HOM05D004234 ORTHO05D004670 4.7e-125 451.8 396 57.3
SGA_v2.0_scaffold2G01218 Striga asiatica HOM05D004234 ORTHO05D004670 8.0e-125 451.1 422 58.1
AL8G38140 Arabidopsis lyrata HOM05D004234 ORTHO05D004670 2.3e-124 449.5 399 57.1
Nitab4.5_0002816g0120 Nicotiana tabacum HOM05D004234 ORTHO05D004670 3.1e-124 449.1 405 58.0
Zm00001eb404400 Zea mays HOM05D004234 ORTHO05D004670 2.0e-123 446.4 421 55.8
Sp2g24650 Schrenkiella parvula HOM05D004234 ORTHO05D004670 3.4e-123 445.7 398 57.0
AUR62015488 Chenopodium quinoa HOM05D004234 ORTHO05D004670 7.5e-123 444.5 441 53.3
FAN10G1071 Fragaria x ananassa HOM05D004234 ORTHO05D004670 1.3e-122 443.7 387 65.4
Os03g0102400 Oryza sativa ssp. japonica HOM05D004234 ORTHO05D004670 2.2e-122 443.0 406 56.9
Sed0020354 Sechium edule HOM05D004234 ORTHO05D004670 2.9e-122 442.6 411 56.9
Eucgr.H04780 Eucalyptus grandis HOM05D004234 ORTHO05D004670 1.9e-121 439.9 403 56.1
MELO3C003311.2 Cucumis melo HOM05D004234 ORTHO05D004670 1.2e-120 437.2 482 51.2
Glyma.12G006700 Glycine max HOM05D004234 ORTHO05D004670 6.0e-120 434.9 400 57.5
Nn1g00980 Nelumbo nucifera HOM05D004234 ORTHO05D004670 3.0e-119 432.6 398 57.0
Os07g0466200 Oryza sativa ssp. japonica HOM05D004234 ORTHO05D004670 5.1e-119 431.8 397 57.4
Pp3c2_13380 Physcomitrium patens HOM05D004234 ORTHO05D004670 6.6e-119 431.4 355 60.8
Hund11832 Selenicereus undatus HOM05D004234 ORTHO05D004670 1.9e-118 429.9 381 58.5
Pp3c17_11550 Physcomitrium patens HOM05D004234 ORTHO05D004670 1.4e-116 423.7 353 59.2
PSO210G3536 Papaver somniferum HOM05D004234 ORTHO05D004670 2.3e-116 422.9 408 55.9
Pp3c14_12080 Physcomitrium patens HOM05D004234 ORTHO05D004670 4.0e-116 422.2 362 59.7
Rhsim09G0190900 Rhododendron simsii HOM05D004234 ORTHO05D004670 2.0e-115 419.9 527 47.4
Aa31LG11G1950 Aethionema arabicum HOM05D004234 ORTHO05D004670 1.3e-114 417.2 424 52.1
Ca_25531_v3 Cicer arietinum L. HOM05D004234 ORTHO05D004670 1.7e-114 416.8 406 54.7
CAN.G48.41 Capsicum annuum HOM05D004234 ORTHO05D004670 7.8e-112 407.9 341 61.6
SMO357G0012 Selaginella moellendorffii HOM05D004234 ORTHO05D004670 1.1e-110 404.1 365 56.2
Lsat_1_v5_gn_8_8740 Lactuca sativa HOM05D004234 ORTHO05D004670 4.3e-110 402.1 381 55.1
AagrBONN_evm.TU.Sc2ySwM_117.258 Anthoceros agrestis HOM05D004234 ORTHO05D004670 1.2e-109 400.6 437 49.4
Medtr1g056720 Medicago truncatula HOM05D004234 ORTHO05D004670 2.4e-108 396.4 368 56.8
Mapoly0072s0015 Marchantia polymorpha HOM05D004234 ORTHO05D004670 1.2e-107 394.0 489 44.0
Lsat_1_v5_gn_1_117520 Lactuca sativa HOM05D004234 ORTHO05D004670 2.6e-107 392.9 344 59.0
Nitab4.5_0003490g0020 Nicotiana tabacum HOM05D004234 ORTHO05D004670 3.4e-107 392.5 371 56.6
Ah.07g207720 Amaranthus hybridus HOM05D004234 ORTHO05D004670 1.1e-105 387.5 428 50.7
EL10Ac3g05852 Beta vulgaris HOM05D004234 ORTHO05D004670 5.4e-105 385.2 408 52.2
CAN.G330.4 Capsicum annuum HOM05D004234 ORTHO05D004670 1.9e-102 376.7 306 61.8
FAN01G2714 Fragaria x ananassa HOM05D004234 ORTHO05D004670 1.1e-100 370.9 381 53.8
CiPaw.04G059200 Carya illinoinensis HOM05D004234 ORTHO05D004670 5.3e-100 368.6 246 73.2
Nitab4.5_0000262g0110 Nicotiana tabacum HOM05D004234 ORTHO05D004670 3.5e-96 355.9 407 50.9
AUR62002211 Chenopodium quinoa HOM05D004234 ORTHO05D004670 4.6e-96 355.5 332 56.0
Peaxi162Scf00304g01343 Petunia axillaris HOM05D004234 ORTHO05D004670 1.0e-95 354.4 375 50.7
Duzib205G0275 Durio zibethinus HOM05D004234 ORTHO05D004670 3.9e-95 352.4 337 56.1
C07p40880 Brassica napus HOM05D004234 ORTHO05D004670 3.4e-91 339.3 361 50.7
Lj8A43G57 Lonicera japonica HOM05D004234 ORTHO05D004670 8.4e-90 334.7 379 50.7
BolC7t44614H Brassica oleracea HOM05D004234 ORTHO05D004670 6.7e-87 325.1 362 48.3
CBR_g12525 Chara braunii HOM05D004234 ORTHO05D004670 2.6e-83 313.2 210 69.0
Sabra01G0096800 Salix brachista HOM05D004234 ORTHO05D004670 1.6e-80 303.9 247 62.3
BcaNung02453 Brassica carinata HOM05D004234 ORTHO05D004670 2.3e-79 300.1 335 48.7
SMO203G0101 Selaginella moellendorffii HOM05D004234 ORTHO05D004670 4.3e-78 295.8 259 57.1
Solyc06g034180.2 Solanum lycopersicum HOM05D004234 ORTHO05D004670 5.7e-70 268.9 332 47.9
Lsat_1_v5_gn_1_117540 Lactuca sativa HOM05D004234 ORTHO05D004670 2.2e-66 256.9 224 58.0
PGSC0003DMG400021593 Solanum tuberosum HOM05D004234 ORTHO05D004670 2.9e-66 256.5 367 43.1
arahy.Tifrunner.gnm1.ann1.EHKS3S Arachis hypogaea HOM05D004234 ORTHO05D004670 2.5e-65 253.4 275 52.7
CARHR275210 Cardamine hirsuta HOM05D004234 ORTHO05D004670 8.8e-63 245.0 255 49.0
Cpa.g.sc4200.1 Carica papaya HOM05D004234 ORTHO05D004670 7.2e-57 225.3 121 85.1
Nitab4.5_0000448g0090 Nicotiana tabacum HOM05D004234 ORTHO05D004670 1.8e-52 210.7 289 43.6
SHI13981 Sapria himalayana HOM05D004234 ORTHO05D004670 2.7e-48 196.8 237 47.3
vmacro09913 Vaccinium macrocarpon HOM05D004234 ORTHO05D004670 2.6e-46 190.3 214 49.5
Cre03.g201000 Chlamydomonas reinhardtii HOM05D004234 ORTHO05D004670 1.7e-45 187.6 323 35.3
Sopen06g015930 Solanum pennellii HOM05D004234 ORTHO05D000001 2.2e-42 177.2 103 75.7
CSS0026342 Camellia sinensis var. sinensis HOM05D004234 ORTHO05D004670 1.6e-35 154.5 95 76.8
arahy.Tifrunner.gnm1.ann1.J8KP6L Arachis hypogaea HOM05D004234 ORTHO05D004670 1.5e-33 147.9 102 69.6
arahy.Tifrunner.gnm1.ann1.AYL6ZU Arachis hypogaea HOM05D004234 ORTHO05D004670 8.0e-32 142.1 88 75.0
Haze_13877 Corylus avellana HOM05D004234 ORTHO05D004670 1.2e-30 138.3 191 42.9
Cpa.g.c29748.2 Carica papaya HOM05D004234 ORTHO05D004670 5.9e-27 125.9 75 81.3
FvH4_2g12100 Fragaria vesca HOM05D004234 ORTHO05D004670 1.4e-20 104.8 114 50.0
SEGI_04441 Sequoiadendron giganteum HOM05D004234 ORTHO05D004670 9.2e-20 102.1 82 64.6
BolC1t03363H Brassica oleracea HOM05D004234 ORTHO05D004670 1.3e-18 98.2 74 58.1
SEGI_30601 Sequoiadendron giganteum HOM05D004234 ORTHO05D004670 1.7e-18 97.8 58 75.9
arahy.Tifrunner.gnm1.ann1.F7NEP8 Arachis hypogaea HOM05D004234 ORTHO05D004670 3.9e-18 96.7 72 65.3
Gorai.011G181500 Gossypium raimondii HOM05D001733 ORTHO05D004670 1.1e-17 95.1 51 84.3
FvH4_c2g00051 Fragaria vesca HOM05D004234 ORTHO05D004670 1.6e-16 91.3 92 53.3
Dinv16843 Davidia involucrata HOM05D004234 ORTHO05D004670 4.7e-16 89.7 62 66.1
Gorai.009G415200 Gossypium raimondii HOM05D004234 ORTHO05D004670 4.7e-16 89.7 51 82.4
Gorai.012G056500 Gossypium raimondii HOM05D004234 ORTHO05D004670 2.3e-15 87.4 51 80.4
Gohir.D04G050932 Gossypium hirsutum HOM05D004234 ORTHO05D004670 8.9e-15 85.5 55 74.5
Gohir.D11G243650 Gossypium hirsutum HOM05D001733 ORTHO05D004670 3.7e-13 80.1 51 74.5
FvH4_3g27272 Fragaria vesca HOM05D004234 ORTHO05D004670 6.4e-13 79.3 82 52.4
SEGI_33806 Sequoiadendron giganteum HOM05D004234 ORTHO05D004670 1.4e-12 78.2 61 55.7
Lsat_1_v5_gn_5_94641 Lactuca sativa HOM05D004234 ORTHO05D004670 3.2e-12 77.0 60 58.3
Migut.L01142 Erythranthe guttata HOM05D004234 ORTHO05D004670 4.1e-12 76.6 67 58.2
FvH4_5g28373 Fragaria vesca HOM05D004234 ORTHO05D004670 5.4e-12 76.3 125 38.4
Haze_13878 Corylus avellana HOM05D004234 ORTHO05D004670 9.5e-09 65.5 39 74.4
Actinidia24997 Actinidia chinensis HOM05D004234 ORTHO05D004670 1.6e-08 64.7 39 74.4
SEGI_09779 Sequoiadendron giganteum HOM05D004234 ORTHO05D004670 1.1e-07 62.0 39 69.2
Rhsim06G0134300 Rhododendron simsii HOM05D000157 ORTHO05D000311 1.2e-06 58.5 36 75.0
PRCOL_00000881 Prasinoderma coloniale HOM05D004234 ORTHO05D004670 5.8e-06 56.2 75 45.3


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