Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0373181 Rosa chinensis HOM05D001997 ORTHO05D004620 1.3e-296 1022.3 514 100.0
FvH4_7g26521 Fragaria vesca HOM05D001997 ORTHO05D004620 1.4e-223 779.6 516 77.9
FAN06G2538 Fragaria x ananassa HOM05D001997 ORTHO05D004620 3.3e-212 741.9 516 75.8
FAN03G0465 Fragaria x ananassa HOM05D001997 ORTHO05D004620 2.2e-208 729.2 516 75.0
FAN10G3679 Fragaria x ananassa HOM05D001997 ORTHO05D004620 2.3e-205 719.2 516 73.1
FAN01G2316 Fragaria x ananassa HOM05D001997 ORTHO05D004620 9.2e-178 627.5 467 71.3
Prupe.2G167200 Prunus persica HOM05D001997 ORTHO05D004620 1.5e-111 407.5 588 44.4
CiPaw.02G056300 Carya illinoinensis HOM05D001997 ORTHO05D004620 3.6e-105 386.3 586 43.0
RcHm_v2.0_Chr1g0354651 Rosa chinensis HOM05D001997 ORTHO05D004620 4.4e-103 379.4 628 41.2
CANSAT21G1219 Cannabis sativa HOM05D001997 ORTHO05D004620 2.2e-102 377.1 619 39.9
Haze_00722 Corylus avellana HOM05D001997 ORTHO05D004620 1.1e-101 374.8 616 41.2
Cfa015772 Carpinus fangiana HOM05D001997 ORTHO05D004620 5.3e-101 372.5 615 41.5
MD07G1139400 Malus domestica HOM05D001997 ORTHO05D004620 1.3e-99 367.9 611 40.4
QL10p047463 Quercus lobata HOM05D001997 ORTHO05D004620 5.0e-99 365.9 609 40.4
Potri.017G035700 Populus trichocarpa HOM05D001997 ORTHO05D004620 7.2e-98 362.1 618 40.0
FAN03G0113 Fragaria x ananassa HOM05D001997 ORTHO05D004620 9.4e-98 361.7 625 39.2
FAN06G4213 Fragaria x ananassa HOM05D001997 ORTHO05D004620 9.4e-98 361.7 625 39.5
Potri.007G124700 Populus trichocarpa HOM05D001997 ORTHO05D004620 1.6e-97 360.9 635 39.1
Ciclev10019328m.g Citrus clementina HOM05D001997 ORTHO05D004620 2.7e-97 360.1 603 39.6
FAN01G1889 Fragaria x ananassa HOM05D001997 ORTHO05D004620 4.7e-97 359.4 625 38.9
FvH4_7g14000 Fragaria vesca HOM05D001997 ORTHO05D004620 6.1e-97 359.0 625 39.4
FAN06G3325 Fragaria x ananassa HOM05D001997 ORTHO05D004620 6.1e-97 359.0 625 39.2
Gorai.004G087500 Gossypium raimondii HOM05D001997 ORTHO05D004620 1.4e-96 357.8 607 40.2
Gorai.006G186500 Gossypium raimondii HOM05D001997 ORTHO05D004620 2.3e-96 357.1 610 39.8
FAN10G4317 Fragaria x ananassa HOM05D001997 ORTHO05D004620 4.0e-96 356.3 625 39.0
FAN10G2611 Fragaria x ananassa HOM05D001997 ORTHO05D004620 5.2e-96 355.9 625 38.9
FAN10G3464 Fragaria x ananassa HOM05D001997 ORTHO05D004620 5.2e-96 355.9 625 38.9
Duzib093G0427 Durio zibethinus HOM05D001997 ORTHO05D004620 6.7e-96 355.5 613 40.6
Gohir.D08G083300 Gossypium hirsutum HOM05D001997 ORTHO05D004620 6.7e-96 355.5 607 40.0
Atru.chr3.1570 Acer truncatum HOM05D001997 ORTHO05D004620 1.5e-95 354.4 611 39.0
Atru.chr3.1589 Acer truncatum HOM05D001997 ORTHO05D004620 1.5e-95 354.4 611 39.0
Nitab4.5_0010690g0010 Nicotiana tabacum HOM05D001997 ORTHO05D004620 2.0e-95 354.0 608 40.0
Gohir.A08G074100 Gossypium hirsutum HOM05D001997 ORTHO05D004620 2.6e-95 353.6 611 39.9
Dinv22695 Davidia involucrata HOM05D001997 ORTHO05D004620 9.7e-95 351.7 612 40.4
Sabra17G0022600 Salix brachista HOM05D001997 ORTHO05D004620 9.7e-95 351.7 618 39.2
Hma1.2p1_0597F.1_g186510 Hydrangea macrophylla HOM05D001997 ORTHO05D004620 3.7e-94 349.7 612 39.4
Manes.04G048600 Manihot esculenta HOM05D001997 ORTHO05D004620 1.4e-93 347.8 618 37.7
Peaxi162Scf00375g00082 Petunia axillaris HOM05D001997 ORTHO05D004620 4.1e-93 346.3 610 38.7
Glyma.11G094600 Glycine max HOM05D001997 ORTHO05D004620 4.5e-92 342.8 615 39.2
Sopen06g029850 Solanum pennellii HOM05D001997 ORTHO05D004620 2.9e-91 340.1 617 38.7
PGR044G1365 Punica granatum HOM05D001997 ORTHO05D004620 6.5e-91 339.0 625 38.2
TWI36G0125 Tripterygium wilfordii HOM05D001997 ORTHO05D004620 7.2e-90 335.5 626 38.2
TAR622G0498 Trochodendron aralioides HOM05D001997 ORTHO05D004620 9.4e-90 335.1 621 39.0
Actinidia35961 Actinidia chinensis HOM05D001997 ORTHO05D004620 1.6e-89 334.3 617 38.6
PGSC0003DMG400026903 Solanum tuberosum HOM05D001997 ORTHO05D004620 4.7e-89 332.8 617 38.6
Phvul.011G023500 Phaseolus vulgaris HOM05D001997 ORTHO05D004620 8.0e-89 332.0 618 38.8
Lj3g0010188 Lotus japonicus HOM05D001997 ORTHO05D004620 5.2e-88 329.3 626 37.5
Rhsim09G0030400 Rhododendron simsii HOM05D001997 ORTHO05D004620 6.8e-88 328.9 615 37.6
VMungo1127G1251 Vigna mungo HOM05D001997 ORTHO05D004620 2.6e-87 327.0 615 38.0
CSS0007184 Camellia sinensis var. sinensis HOM05D001997 ORTHO05D004620 3.4e-87 326.6 599 37.9
Sc19g0002180 Simmondsia chinensis HOM05D001997 ORTHO05D004620 3.4e-87 326.6 619 35.4
THA.LOC104802304 Tarenaya hassleriana HOM05D001997 ORTHO05D004620 3.4e-87 326.6 608 37.3
Lj6C60T7 Lonicera japonica HOM05D001997 ORTHO05D004620 4.4e-87 326.2 610 37.4
Cc01_g08750 Coffea canephora HOM05D001997 ORTHO05D004620 9.8e-87 325.1 639 36.6
Dinv05995 Davidia involucrata HOM05D001997 ORTHO05D004620 1.3e-86 324.7 607 38.2
TAR636G0474 Trochodendron aralioides HOM05D001997 ORTHO05D004620 1.7e-86 324.3 618 37.4
Lsat_1_v5_gn_6_55020 Lactuca sativa HOM05D001997 ORTHO05D004620 2.8e-86 323.6 606 36.6
Lj4g0020139 Lotus japonicus HOM05D001997 ORTHO05D004620 3.7e-86 323.2 581 39.4
Psat7g172720 Pisum sativum HOM05D001997 ORTHO05D004620 5.4e-85 319.3 619 36.5
MSTRG.12412 Avicennia marina HOM05D001997 ORTHO05D004620 2.0e-84 317.4 625 37.1
arahy.Tifrunner.gnm1.ann1.7X5TTD Arachis hypogaea HOM05D001997 ORTHO05D004620 4.5e-84 316.2 603 38.3
Sp4g25380 Schrenkiella parvula HOM05D001997 ORTHO05D004620 1.0e-83 315.1 611 36.3
Nitab4.5_0002368g0100 Nicotiana tabacum HOM05D001997 ORTHO05D004620 1.3e-83 314.7 545 39.6
Migut.N02417 Erythranthe guttata HOM05D001997 ORTHO05D004620 3.8e-83 313.2 604 35.8
AT2G43250 Arabidopsis thaliana HOM05D001997 ORTHO05D004620 1.1e-82 311.6 613 35.2
TPR.G13749 Trifolium pratense HOM05D001997 ORTHO05D004620 1.5e-82 311.2 602 36.9
Glyma.12G021000 Glycine max HOM05D001997 ORTHO05D004620 3.2e-82 310.1 548 40.7
AUR62035000 Chenopodium quinoa HOM05D001997 ORTHO05D004620 5.5e-82 309.3 607 34.4
Oeu015677.2 Olea europaea HOM05D001997 ORTHO05D004620 7.2e-82 308.9 622 35.7
HanXRQChr02g0057961 Helianthus annuus HOM05D001997 ORTHO05D004620 1.2e-81 308.1 612 36.3
TPR.G13756 Trifolium pratense HOM05D001997 ORTHO05D004620 4.7e-81 306.2 622 35.2
CARHR138340 Cardamine hirsuta HOM05D001997 ORTHO05D004620 6.1e-81 305.8 594 36.4
Thhalv10001801m.g Eutrema salsugineum HOM05D001997 ORTHO05D004620 6.1e-81 305.8 612 34.8
Glyma.03G127700 Glycine max HOM05D001997 ORTHO05D004620 6.1e-81 305.8 617 36.6
arahy.Tifrunner.gnm1.ann1.JTZ133 Arachis hypogaea HOM05D001997 ORTHO05D004620 1.0e-80 305.1 605 36.5
Thecc.05G002900 Theobroma cacao HOM05D001997 ORTHO05D004620 2.3e-80 303.9 627 36.5
MSTRG.17660 Avicennia marina HOM05D001997 ORTHO05D004620 4.0e-80 303.1 624 35.4
Ca_26058_v3 Cicer arietinum L. HOM05D001997 ORTHO05D004620 6.8e-80 302.4 627 35.9
HanXRQChr07g0186151 Helianthus annuus HOM05D001997 ORTHO05D004620 3.4e-79 300.1 593 35.8
ECA233G5997 Erigeron canadensis HOM05D001997 ORTHO05D004620 7.5e-79 298.9 610 35.1
Medtr4g076620 Medicago truncatula HOM05D001997 ORTHO05D004620 9.8e-79 298.5 608 36.2
SGA_v2.0_scaffold16G07570 Striga asiatica HOM05D001997 ORTHO05D004620 1.3e-78 298.1 606 34.0
A04p32530 Brassica napus HOM05D001997 ORTHO05D004620 1.7e-78 297.7 603 35.5
BraA04t18717Z Brassica rapa HOM05D001997 ORTHO05D004620 3.7e-78 296.6 604 35.4
Ca_30128_v3 Cicer arietinum L. HOM05D001997 ORTHO05D004620 8.3e-78 295.4 616 35.9
C04p70220 Brassica napus HOM05D001997 ORTHO05D004620 2.4e-77 293.9 602 35.4
AL4G41910 Arabidopsis lyrata HOM05D001997 ORTHO05D004620 7.0e-77 292.4 611 34.9
BcaC02g07197 Brassica carinata HOM05D001997 ORTHO05D004620 9.2e-77 292.0 591 35.5
BolC4t28526H Brassica oleracea HOM05D001997 ORTHO05D004620 1.6e-76 291.2 591 35.5
Ah.05g167000 Amaranthus hybridus HOM05D001997 ORTHO05D004620 1.3e-75 288.1 612 33.3
Medtr4g076640 Medicago truncatula HOM05D001997 ORTHO05D004620 1.3e-75 288.1 590 35.9
MBI11_g35030_MAGBIO Magnolia biondii HOM05D001997 ORTHO05D004620 2.3e-75 287.3 621 34.3
Oeu048804.2 Olea europaea HOM05D001997 ORTHO05D004620 5.6e-74 282.7 582 34.0
Aqoxy7G03960 Aquilegia oxysepala HOM05D001997 ORTHO05D004620 1.8e-72 277.7 621 33.5
unitig_22.g6172 Utricularia gibba HOM05D001997 ORTHO05D004620 3.0e-72 276.9 606 34.2
AUR62037461 Chenopodium quinoa HOM05D001997 ORTHO05D004620 4.0e-72 276.6 603 33.0
CDE08G0116 Ceratophyllum demersum HOM05D001997 ORTHO05D004620 6.8e-72 275.8 608 34.4
HPP92_007608 Vanilla planifolia HOM05D001997 ORTHO05D004620 5.7e-71 272.7 614 32.6
BcaB06g29293 Brassica carinata HOM05D001997 ORTHO05D004620 2.9e-70 270.4 558 35.7
Haze_01373 Corylus avellana HOM05D001997 ORTHO05D004620 6.4e-70 269.2 572 35.0
PSO675G0019 Papaver somniferum HOM05D001997 ORTHO05D004620 1.8e-69 267.7 616 32.6
PSO017G4366 Papaver somniferum HOM05D001997 ORTHO05D004620 4.1e-69 266.5 618 32.4
Cfa015264 Carpinus fangiana HOM05D001997 ORTHO05D004620 7.0e-69 265.8 574 34.7
MD01G1056400 Malus domestica HOM05D001997 ORTHO05D004620 7.0e-69 265.8 365 46.0
A05p03690 Brassica napus HOM05D001997 ORTHO05D004620 1.6e-68 264.6 515 35.9
Nn5g27952 Nelumbo nucifera HOM05D001997 ORTHO05D004620 4.6e-68 263.1 411 39.2
C08p23950 Brassica napus HOM05D001997 ORTHO05D004620 6.6e-67 259.2 547 33.8
BraA05t19355Z Brassica rapa HOM05D001997 ORTHO05D004620 8.6e-67 258.8 515 36.1
C04p04300 Brassica napus HOM05D001997 ORTHO05D004620 2.5e-66 257.3 524 34.7
Thhalv10001772m.g Eutrema salsugineum HOM05D001997 ORTHO05D004620 4.3e-66 256.5 563 34.6
Carub.0004s2573 Capsella rubella HOM05D001997 ORTHO05D004620 3.6e-65 253.4 580 33.3
GSVIVG01013581001 Vitis vinifera HOM05D001997 ORTHO05D004620 1.4e-64 251.5 374 43.0
Zm00001eb425530 Zea mays HOM05D001997 ORTHO05D004620 3.1e-64 250.4 646 31.4
Os04g0490700 Oryza sativa ssp. japonica HOM05D001997 ORTHO05D004620 1.1e-61 241.9 644 31.5
BolC4t22066H Brassica oleracea HOM05D001997 ORTHO05D004620 2.4e-61 240.7 542 32.7
ATR0743G280 Amborella trichopoda HOM05D001997 ORTHO05D004620 1.6e-60 238.0 631 31.7
BcaC07g39373 Brassica carinata HOM05D001997 ORTHO05D004620 3.5e-60 236.9 512 32.6
BolC8t50019H Brassica oleracea HOM05D001997 ORTHO05D004620 1.0e-59 235.3 533 31.7
FAN10G4060 Fragaria x ananassa HOM05D001997 ORTHO05D004620 1.3e-59 235.0 358 45.3
SEGI_28245 Sequoiadendron giganteum HOM05D001997 ORTHO05D004620 6.6e-59 232.6 646 30.2
DCAR_010832 Daucus carota HOM05D001997 ORTHO05D004620 1.8e-56 224.6 567 33.0
A06p18770 Brassica napus HOM05D001997 ORTHO05D004620 7.5e-55 219.2 523 31.9
Sabra17G0022300 Salix brachista HOM05D001997 ORTHO05D004620 3.7e-54 216.9 518 34.0
Cpa.g.sc81.168 Carica papaya HOM05D001997 ORTHO05D004620 3.2e-53 213.8 557 31.6
Gohir.D09G164700 Gossypium hirsutum HOM05D001997 ORTHO05D004620 4.3e-50 203.4 446 35.7
Gohir.A09G169000 Gossypium hirsutum HOM05D001997 ORTHO05D004620 2.8e-49 200.7 446 35.7
Solyc06g073490.2 Solanum lycopersicum HOM05D001997 ORTHO05D004620 6.8e-48 196.1 353 38.5
Eucgr.A00056 Eucalyptus grandis HOM05D001997 ORTHO05D004620 1.7e-43 181.4 355 36.9
BcaNung06617 Brassica carinata HOM05D001997 ORTHO05D004620 5.6e-42 176.4 516 30.2
Lalb_Chr01g0001101 Lupinus albus HOM05D001997 ORTHO05D004620 8.1e-41 172.6 346 35.8
Glyma.19G130251 Glycine max HOM05D001997 ORTHO05D004620 1.6e-36 158.3 312 37.5
BraA06t24958Z Brassica rapa HOM05D001997 ORTHO05D004620 2.7e-36 157.5 378 32.5
Mapoly0021s0032 Marchantia polymorpha HOM05D001997 ORTHO05D004620 9.9e-31 139.0 634 24.4
SalBow3G0527 Salvia bowleyana HOM05D001997 ORTHO05D004620 2.2e-30 137.9 323 33.7
Pp3c13_12610 Physcomitrium patens HOM05D001997 ORTHO05D004620 1.2e-23 115.5 416 26.9
SalBow3G4162 Salvia bowleyana HOM05D001997 ORTHO05D004620 1.8e-19 101.7 88 62.5
BcaC07g39374 Brassica carinata HOM05D001997 ORTHO05D004620 3.0e-19 100.9 147 41.5
SGA_v2.0_scaffold4G02500 Striga asiatica HOM05D001997 ORTHO05D004620 4.8e-17 93.6 69 65.2
AagrBONN_evm.TU.Sc2ySwM_228.3298 Anthoceros agrestis HOM05D001997 ORTHO05D004620 9.0e-16 89.4 172 39.0
BcaB01g03399 Brassica carinata HOM05D001997 ORTHO05D004620 2.0e-15 88.2 279 27.2
SMO356G0473 Selaginella moellendorffii HOM05D001997 ORTHO05D004620 1.2e-12 79.0 317 28.1
CAN.G138.1 Capsicum annuum HOM05D001997 ORTHO05D004620 1.3e-11 75.5 100 44.0
GSVIVG01013582001 Vitis vinifera HOM05D001997 ORTHO05D004620 3.0e-11 74.3 111 41.4
CAN.G46.28 Capsicum annuum HOM05D001997 ORTHO05D004620 3.9e-11 73.9 91 46.2
BcaB06g29296 Brassica carinata HOM05D001997 ORTHO05D004620 5.1e-11 73.6 108 41.7
SHI06486 Sapria himalayana HOM05D002588 ORTHO05D002979 5.1e-11 73.6 98 43.9
C04p70240 Brassica napus HOM05D001997 ORTHO05D004620 9.6e-10 69.3 119 39.5
CAN.G1014.21 Capsicum annuum HOM05D001997 ORTHO05D004620 1.8e-08 65.1 79 48.1
Lsat_1_v5_gn_5_125441 Lactuca sativa HOM05D001997 ORTHO05D004620 4.1e-08 63.9 91 42.9
BolC4t28530H Brassica oleracea HOM05D001997 ORTHO05D004620 6.9e-08 63.2 59 52.5
BolC4t28528H Brassica oleracea HOM05D001997 ORTHO05D004620 9.0e-08 62.8 122 37.7
Actinidia28986 Actinidia chinensis HOM05D001997 ORTHO05D004620 5.9e-07 60.1 220 27.3
Hund00190 Selenicereus undatus HOM05D001997 ORTHO05D004620 5.9e-07 60.1 110 39.1
C03p28740 Brassica napus HOM05D001997 ORTHO05D004620 1.0e-06 59.3 52 51.9
CAN.G765.4 Capsicum annuum HOM05D001997 ORTHO05D004620 8.5e-06 56.2 79 43.0


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