Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0372361 Rosa chinensis HOM05D012883 ORTHO05D011203 1.3e-41 172.6 85 100.0
FAN03G0458 Fragaria x ananassa HOM05D012883 ORTHO05D011203 2.4e-27 125.2 71 83.1
FAN06G0801 Fragaria x ananassa HOM05D012883 ORTHO05D011203 1.3e-15 86.3 71 63.4
FAN10G1321 Fragaria x ananassa HOM05D012883 ORTHO05D011203 6.5e-12 73.9 50 74.0
Thecc.10G178900 Theobroma cacao HOM05D012883 ORTHO05D011203 3.2e-11 71.6 67 50.7
Lalb_Chr08g0239211 Lupinus albus HOM05D010279 ORTHO05D011203 4.6e-10 67.8 57 54.4
Prupe.6G294500 Prunus persica HOM05D012883 ORTHO05D011203 6.7e-09 63.9 34 73.5
Os05g0323400 Oryza sativa ssp. japonica HOM05D010279 ORTHO05D011203 1.1e-08 63.2 40 62.5
Potri.019G059000 Populus trichocarpa HOM05D010279 ORTHO05D011203 1.9e-08 62.4 83 42.2
Glyma.04G223100 Glycine max HOM05D010279 ORTHO05D011203 2.5e-08 62.0 57 50.9
Glyma.06G142200 Glycine max HOM05D010279 ORTHO05D011203 7.4e-08 60.5 45 57.8
Zm00001eb285070 Zea mays HOM05D012883 ORTHO05D011203 2.8e-07 58.5 52 50.0
Gohir.A05G402700 Gossypium hirsutum HOM05D012883 ORTHO05D011203 8.2e-07 57.0 59 44.1
Gohir.D04G012800 Gossypium hirsutum HOM05D012883 ORTHO05D011203 8.2e-07 57.0 59 44.1
Gorai.012G015100 Gossypium raimondii HOM05D012883 ORTHO05D011203 8.2e-07 57.0 59 44.1
Nn5g26841 Nelumbo nucifera HOM05D010279 ORTHO05D011203 8.2e-07 57.0 34 64.7
Phvul.009G043300 Phaseolus vulgaris HOM05D010279 ORTHO05D011203 1.4e-06 56.2 49 51.0
MBI03_g11401_MAGBIO Magnolia biondii HOM05D010279 ORTHO05D011203 1.8e-06 55.8 39 59.0
Lalb_Chr11g0067761 Lupinus albus HOM05D010279 ORTHO05D011203 3.1e-06 55.1 58 50.0
Psat5g068480 Pisum sativum HOM05D010279 ORTHO05D011203 3.1e-06 55.1 51 51.0
TPR.G24271 Trifolium pratense HOM05D010279 ORTHO05D011203 3.1e-06 55.1 51 45.1
CSS0000028 Camellia sinensis var. sinensis HOM05D010279 ORTHO05D011203 5.3e-06 54.3 33 63.6


User provided reference genes

Program Settings