Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0371951 Rosa chinensis HOM05D009501 ORTHO05D344225 2.0e-52 208.8 101 100.0
RcHm_v2.0_Chr2g0148011 Rosa chinensis HOM05D009501 ORTHO05D342583 5.0e-35 151.0 85 89.4
RcHm_v2.0_Chr2g0125531 Rosa chinensis HOM05D009501 ORTHO05D346198 8.4e-35 150.2 74 95.9
RcHm_v2.0_Chr3g0456411 Rosa chinensis HOM05D009501 ORTHO05D343829 8.4e-35 150.2 74 95.9
RcHm_v2.0_Chr2g0121091 Rosa chinensis HOM05D009501 ORTHO05D342605 3.2e-34 148.3 74 94.6
RcHm_v2.0_Chr2g0121401 Rosa chinensis HOM05D009501 ORTHO05D348033 4.2e-34 147.9 74 94.6
RcHm_v2.0_Chr2g0146221 Rosa chinensis HOM05D009501 ORTHO05D346517 1.6e-33 146.0 74 93.2
RcHm_v2.0_Chr7g0193441 Rosa chinensis HOM05D009501 ORTHO05D342899 2.4e-29 132.1 65 98.5
RcHm_v2.0_Chr2g0172821 Rosa chinensis HOM05D009501 ORTHO05D343224 1.4e-26 122.9 59 96.6
RcHm_v2.0_Chr3g0458801 Rosa chinensis HOM05D009501 ORTHO05D347237 4.6e-25 117.9 58 93.1
RcHm_v2.0_Chr2g0125891 Rosa chinensis HOM05D009501 ORTHO05D342573 3.3e-23 111.7 54 96.3
RcHm_v2.0_Chr7g0188901 Rosa chinensis HOM05D009501 ORTHO05D348402 4.8e-22 107.8 68 80.9
RcHm_v2.0_Chr2g0123441 Rosa chinensis HOM05D009501 ORTHO05D345190 1.0e-19 100.1 50 94.0
RcHm_v2.0_Chr3g0458341 Rosa chinensis HOM05D009501 ORTHO05D345011 1.3e-19 99.8 48 97.9
RcHm_v2.0_Chr2g0152041 Rosa chinensis HOM05D009501 ORTHO05D346335 2.9e-19 98.6 58 87.9
RcHm_v2.0_Chr2g0134721 Rosa chinensis HOM05D009501 ORTHO05D345538 1.1e-18 96.7 58 87.9
RcHm_v2.0_Chr2g0122351 Rosa chinensis HOM05D009501 ORTHO05D341307 1.4e-18 96.3 48 93.8
RcHm_v2.0_Chr7g0181631 Rosa chinensis HOM05D009501 ORTHO05D342634 1.4e-18 96.3 52 92.3
RcHm_v2.0_Chr2g0172141 Rosa chinensis HOM05D009501 ORTHO05D347212 1.9e-18 95.9 46 95.7
RcHm_v2.0_Chr2g0176641 Rosa chinensis HOM05D009501 ORTHO05D341879 2.5e-18 95.5 50 94.0
RcHm_v2.0_Chr1g0374781 Rosa chinensis HOM05D009501 ORTHO05D341958 4.2e-18 94.7 48 93.8
RcHm_v2.0_Chr2g0129841 Rosa chinensis HOM05D009501 ORTHO05D340868 9.4e-18 93.6 47 95.7
RcHm_v2.0_Chr2g0133011 Rosa chinensis HOM05D009501 ORTHO05D341341 9.4e-18 93.6 47 95.7
RcHm_v2.0_Chr2g0161861 Rosa chinensis HOM05D009501 ORTHO05D341995 9.4e-18 93.6 47 95.7
RcHm_v2.0_Chr2g0175061 Rosa chinensis HOM05D009501 ORTHO05D348800 3.3e-15 85.1 47 87.2
RcHm_v2.0_Chr2g0130441 Rosa chinensis HOM05D009501 ORTHO05D348382 1.1e-13 80.1 47 83.0
RcHm_v2.0_Chr2g0129551 Rosa chinensis HOM05D013162 ORTHO05D345436 5.0e-11 71.2 79 55.7
RcHm_v2.0_Chr2g0145951 Rosa chinensis HOM05D013162 ORTHO05D347407 6.5e-11 70.9 87 52.9
RcHm_v2.0_Chr2g0137521 Rosa chinensis HOM05D013162 ORTHO05D342650 4.4e-07 58.2 41 78.0
RcHm_v2.0_Chr2g0121621 Rosa chinensis HOM05D017629 ORTHO05D345494 4.8e-06 54.7 59 62.7
RcHm_v2.0_Chr2g0126821 Rosa chinensis HOM05D009501 ORTHO05D341325 4.8e-06 54.7 48 64.6
RcHm_v2.0_Chr2g0126831 Rosa chinensis HOM05D009501 ORTHO05D341994 4.8e-06 54.7 48 64.6
RcHm_v2.0_Chr2g0126591 Rosa chinensis HOM05D009501 ORTHO05D345083 6.3e-06 54.3 39 74.4


User provided reference genes

Program Settings