Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0365191 Rosa chinensis HOM05D016124 ORTHO05D020665 9.3e-33 142.9 70 100.0
FvH4_3g26701 Fragaria vesca HOM05D016124 ORTHO05D020665 2.6e-11 71.6 52 71.2
FvH4_2g13832 Fragaria vesca HOM05D016124 ORTHO05D020665 3.5e-11 71.2 52 71.2
FvH4_6g31290 Fragaria vesca HOM05D000325 ORTHO05D002025 8.5e-10 66.6 43 79.1
FAN11G1851 Fragaria x ananassa HOM05D016124 ORTHO05D020665 8.5e-10 66.6 47 74.5
FAN14G4325 Fragaria x ananassa HOM05D000325 ORTHO05D002025 8.5e-10 66.6 43 79.1
RcHm_v2.0_Chr2g0138021 Rosa chinensis HOM05D000325 ORTHO05D002025 1.1e-09 66.2 43 76.7
FvH4_4g14350 Fragaria vesca HOM05D016124 ORTHO05D020665 1.9e-09 65.5 44 77.3
RcHm_v2.0_Chr6g0248181 Rosa chinensis HOM05D016124 ORTHO05D020665 2.5e-09 65.1 42 83.3
FAN09G2401 Fragaria x ananassa HOM05D000325 ORTHO05D002025 5.5e-09 63.9 43 74.4
FAN24G3517 Fragaria x ananassa HOM05D016124 ORTHO05D020665 7.2e-09 63.5 44 75.0
FAN05G3340 Fragaria x ananassa HOM05D006782 ORTHO05D200376 2.7e-08 61.6 44 70.5
FAN05G5121 Fragaria x ananassa HOM05D000325 ORTHO05D002025 3.6e-08 61.2 43 72.1
Gohir.A05G130500 Gossypium hirsutum HOM05D000325 ORTHO05D002025 3.0e-07 58.2 46 71.7
Gohir.D05G129900 Gossypium hirsutum HOM05D000325 ORTHO05D002025 3.0e-07 58.2 46 71.7
Gorai.009G133700 Gossypium raimondii HOM05D000325 ORTHO05D002025 3.0e-07 58.2 46 71.7
MD17G1194200 Malus domestica HOM05D000325 ORTHO05D002025 8.8e-07 56.6 43 69.8
Duzib192G0932 Durio zibethinus HOM05D000325 ORTHO05D002025 2.0e-06 55.5 43 67.4
Solyc03g120120.3 Solanum lycopersicum HOM05D000325 ORTHO05D002025 2.0e-06 55.5 43 60.5
Sopen03g038990 Solanum pennellii HOM05D000325 ORTHO05D002025 2.0e-06 55.5 43 60.5
Nn2g11758 Nelumbo nucifera HOM05D000325 ORTHO05D002025 2.6e-06 55.1 43 62.8
Nitab4.5_0003351g0090 Nicotiana tabacum HOM05D000325 ORTHO05D002025 2.6e-06 55.1 47 53.2
CAN.G438.73 Capsicum annuum HOM05D000325 ORTHO05D002025 3.3e-06 54.7 43 58.1
Cfa002076 Carpinus fangiana HOM05D000325 ORTHO05D002025 4.4e-06 54.3 44 61.4
QL05p023337 Quercus lobata HOM05D000325 ORTHO05D002025 5.7e-06 53.9 43 62.8
Haze_16402 Corylus avellana HOM05D000325 ORTHO05D002025 7.5e-06 53.5 58 50.0
Duzib235G0290 Durio zibethinus HOM05D000325 ORTHO05D002025 7.5e-06 53.5 43 65.1
CiPaw.01G238500 Carya illinoinensis HOM05D000325 ORTHO05D002025 9.7e-06 53.1 56 53.6


User provided reference genes

Program Settings