Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0363411 Rosa chinensis HOM05D008287 ORTHO05D010110 8.4e-44 179.9 85 100.0
FAN01G1692 Fragaria x ananassa HOM05D008287 ORTHO05D010110 1.9e-32 142.1 86 79.1
FAN10G2561 Fragaria x ananassa HOM05D008287 ORTHO05D010110 1.3e-31 139.4 86 77.9
FvH4_7g19600 Fragaria vesca HOM05D008287 ORTHO05D010110 1.6e-31 139.0 86 76.7
FAN03G0373 Fragaria x ananassa HOM05D008287 ORTHO05D010110 4.2e-27 124.4 78 78.2
FAN06G2349 Fragaria x ananassa HOM05D000286 ORTHO05D009721 2.1e-26 122.1 77 75.3
Prupe.2G213800 Prunus persica HOM05D008287 ORTHO05D010110 3.3e-16 88.2 91 54.9
MD01G1108600 Malus domestica HOM05D008287 ORTHO05D010110 1.3e-15 86.3 98 48.0
TAR629G1172 Trochodendron aralioides HOM05D008287 ORTHO05D010110 6.5e-12 73.9 89 48.3
Nn2g10792 Nelumbo nucifera HOM05D008287 ORTHO05D010110 9.4e-11 70.1 92 47.8
Phvul.004G082500 Phaseolus vulgaris HOM05D008287 ORTHO05D010110 1.6e-10 69.3 60 53.3
VMungo0464G1886 Vigna mungo HOM05D008287 ORTHO05D010110 2.1e-10 68.9 87 40.2
HanXRQChr01g0011461 Helianthus annuus HOM05D008287 ORTHO05D010110 2.7e-10 68.6 90 44.4
Glyma.16G154900 Glycine max HOM05D008287 ORTHO05D010110 4.6e-10 67.8 81 45.7
CiPaw.01G272900 Carya illinoinensis HOM05D008287 ORTHO05D010110 7.9e-10 67.0 54 59.3
Solyc04g049407.1 Solanum lycopersicum HOM05D008287 ORTHO05D010110 2.3e-09 65.5 79 45.6
Glyma.02G073500 Glycine max HOM05D008287 ORTHO05D010110 3.9e-09 64.7 61 52.5
MBI10_g13401_MAGBIO Magnolia biondii HOM05D008287 ORTHO05D010110 3.9e-09 64.7 72 52.8
Duzib114G0252 Durio zibethinus HOM05D008287 ORTHO05D010110 6.7e-09 63.9 57 54.4
Sc09g0006380 Simmondsia chinensis HOM05D008287 ORTHO05D010110 8.8e-09 63.5 50 62.0
Sopen04g019400 Solanum pennellii HOM05D008287 ORTHO05D010110 8.8e-09 63.5 73 46.6
PGSC0003DMG400012876 Solanum tuberosum HOM05D008287 ORTHO05D010110 8.8e-09 63.5 52 61.5
Aqoxy1G01238 Aquilegia oxysepala HOM05D008287 ORTHO05D010110 2.5e-08 62.0 84 42.9
ClCG05G021010 Citrullus lanatus HOM05D008287 ORTHO05D010110 2.5e-08 62.0 74 47.3
Sed0007335 Sechium edule HOM05D008287 ORTHO05D010110 2.5e-08 62.0 83 41.0
Atru.chr12.776 Acer truncatum HOM05D008287 ORTHO05D010110 3.3e-08 61.6 95 41.1
Gorai.013G025800 Gossypium raimondii HOM05D008287 ORTHO05D010110 3.3e-08 61.6 54 51.9
Thecc.10G073600 Theobroma cacao HOM05D008287 ORTHO05D010110 3.3e-08 61.6 54 61.1
Gohir.A13G024200 Gossypium hirsutum HOM05D008287 ORTHO05D010110 4.3e-08 61.2 62 51.6
Gohir.D13G023100 Gossypium hirsutum HOM05D008287 ORTHO05D010110 5.7e-08 60.8 62 51.6
CANSAT56G0495 Cannabis sativa HOM05D008287 ORTHO05D010110 7.4e-08 60.5 86 40.7
Migut.F02005 Erythranthe guttata HOM05D008287 ORTHO05D010110 7.4e-08 60.5 76 44.7
Atru.chr12.751 Acer truncatum HOM05D008287 ORTHO05D010110 9.7e-08 60.1 70 51.4
ECA238G2524 Erigeron canadensis HOM05D008287 ORTHO05D010110 1.3e-07 59.7 77 41.6
Aa31sc101G40 Aethionema arabicum HOM05D013386 ORTHO05D010110 1.7e-07 59.3 85 42.4
MSTRG.9186 Avicennia marina HOM05D008287 ORTHO05D010110 1.7e-07 59.3 76 42.1
Hma1.2p1_0063F.1_g034480 Hydrangea macrophylla HOM05D008287 ORTHO05D010110 2.2e-07 58.9 46 67.4
Nitab4.5_0000575g0160 Nicotiana tabacum HOM05D008287 ORTHO05D010110 3.7e-07 58.2 39 66.7
Nitab4.5_0010206g0030 Nicotiana tabacum HOM05D008287 ORTHO05D010110 3.7e-07 58.2 39 66.7
Ciclev10033160m.g Citrus clementina HOM05D008287 ORTHO05D010110 4.8e-07 57.8 32 75.0
PGR142G4013 Punica granatum HOM05D008287 ORTHO05D010110 4.8e-07 57.8 32 75.0
CsaV3_5G036300 Cucumis sativus L. HOM05D008287 ORTHO05D010110 6.3e-07 57.4 61 49.2
Sabra10G0172000 Salix brachista HOM05D008287 ORTHO05D010110 6.3e-07 57.4 61 49.2
TPR.G822 Trifolium pratense HOM05D008287 ORTHO05D010110 6.3e-07 57.4 83 42.2
Manes.10G045900 Manihot esculenta HOM05D008287 ORTHO05D010110 8.2e-07 57.0 47 66.0
Rhsim09G0151900 Rhododendron simsii HOM05D008287 ORTHO05D010110 8.2e-07 57.0 97 38.1
SGA_v2.0_scaffold62G21430 Striga asiatica HOM05D008287 ORTHO05D010110 1.1e-06 56.6 32 68.8
Potri.008G039901 Populus trichocarpa HOM05D008287 ORTHO05D010110 2.4e-06 55.5 92 33.7
Lalb_Chr19g0129701 Lupinus albus HOM05D008287 ORTHO05D010110 3.1e-06 55.1 44 59.1
unitig_899.g14438 Utricularia gibba HOM05D008287 ORTHO05D010110 3.1e-06 55.1 76 38.2
Actinidia38852 Actinidia chinensis HOM05D008287 ORTHO05D010110 5.3e-06 54.3 54 55.6
Lsat_1_v5_gn_2_114761 Lactuca sativa HOM05D008287 ORTHO05D010110 9.1e-06 53.5 85 38.8
Sabra08G0027300 Salix brachista HOM05D008287 ORTHO05D010110 9.1e-06 53.5 36 61.1


User provided reference genes

Program Settings