Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0358691 Rosa chinensis HOM05D008545 ORTHO05D010341 1.1e-122 443.4 221 100.0
FAN06G5050 Fragaria x ananassa HOM05D008545 ORTHO05D010341 3.3e-108 395.2 223 90.1
FvH4_7g15870 Fragaria vesca HOM05D008545 ORTHO05D010341 5.6e-108 394.4 223 90.1
FAN10G0919 Fragaria x ananassa HOM05D008545 ORTHO05D010341 2.2e-104 382.5 223 87.9
FAN10G3148 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.4e-103 379.8 223 87.0
FAN01G1302 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.9e-103 379.4 223 86.5
FAN03G1297 Fragaria x ananassa HOM05D008545 ORTHO05D010341 5.1e-101 371.3 223 85.7
FAN06G3211 Fragaria x ananassa HOM05D008545 ORTHO05D010341 7.2e-71 271.2 163 86.5
MD07G1144400 Malus domestica HOM05D008545 ORTHO05D010341 3.5e-65 252.3 228 62.7
Prupe.2G183300 Prunus persica HOM05D008545 ORTHO05D010341 7.5e-60 234.6 213 62.0
Thecc.01G347700 Theobroma cacao HOM05D008545 ORTHO05D010341 6.3e-43 178.3 215 47.9
Atru.chr5.619 Acer truncatum HOM05D008545 ORTHO05D010341 1.2e-41 174.1 223 48.0
Duzib138G0500 Durio zibethinus HOM05D008545 ORTHO05D010341 3.8e-40 169.1 215 46.5
GSVIVG01027047001 Vitis vinifera HOM05D008545 ORTHO05D010341 1.8e-37 160.2 226 46.0
Gohir.D07G144800 Gossypium hirsutum HOM05D008545 ORTHO05D010341 8.9e-37 157.9 225 44.4
Gorai.001G156800 Gossypium raimondii HOM05D008545 ORTHO05D010341 8.9e-37 157.9 225 44.4
Gohir.A07G139700 Gossypium hirsutum HOM05D008545 ORTHO05D010341 2.0e-36 156.8 225 44.0
TAR629G2366 Trochodendron aralioides HOM05D008545 ORTHO05D010341 7.5e-36 154.8 224 45.1
Dinv43892 Davidia involucrata HOM05D008545 ORTHO05D010341 5.9e-33 145.2 214 43.0
Eucgr.D02345 Eucalyptus grandis HOM05D008545 ORTHO05D010341 8.6e-32 141.4 217 42.4
Potri.002G167500 Populus trichocarpa HOM05D008545 ORTHO05D010341 1.2e-28 131.0 222 38.7
Potri.014G094600 Populus trichocarpa HOM05D008545 ORTHO05D010341 1.5e-28 130.6 217 39.2
Manes.01G249300 Manihot esculenta HOM05D008545 ORTHO05D010341 2.4e-26 123.2 214 37.9
MD01G1075500 Malus domestica HOM05D008545 ORTHO05D010341 4.1e-26 122.5 110 65.5
CSS0024380 Camellia sinensis var. sinensis HOM05D008545 ORTHO05D010341 1.1e-23 114.4 220 36.4
Lj7A504G55 Lonicera japonica HOM05D008545 ORTHO05D010341 6.2e-22 108.6 219 37.4
CANSAT56G3993 Cannabis sativa HOM05D008545 ORTHO05D010341 3.1e-21 106.3 220 36.4
PGR031G2054 Punica granatum HOM05D008545 ORTHO05D010341 4.0e-21 105.9 228 35.1
Lj9A592T71 Lonicera japonica HOM05D008545 ORTHO05D010341 1.2e-20 104.4 227 36.1
Sabra14G0069200 Salix brachista HOM05D008545 ORTHO05D010341 8.6e-16 88.2 114 47.4
Actinidia20194 Actinidia chinensis HOM05D008545 ORTHO05D010341 3.3e-15 86.3 207 32.4
Nitab4.5_0002262g0100 Nicotiana tabacum HOM05D008545 ORTHO05D010341 4.3e-15 85.9 157 35.7
CAN.G310.5 Capsicum annuum HOM05D008545 ORTHO05D010341 2.1e-14 83.6 147 34.7
Peaxi162Scf00403g00718 Petunia axillaris HOM05D008545 ORTHO05D010341 8.1e-14 81.6 148 36.5
DCAR_016077 Daucus carota HOM05D009167 ORTHO05D010341 1.8e-13 80.5 218 30.7
Nn1g01793 Nelumbo nucifera HOM05D008545 ORTHO05D010341 6.8e-13 78.6 165 35.8
Hma1.2p1_0384F.1_g141050 Hydrangea macrophylla HOM05D008545 ORTHO05D010341 1.5e-12 77.4 88 48.9
Solyc05g050240.3 Solanum lycopersicum HOM05D008545 ORTHO05D010341 4.4e-12 75.9 165 30.9
PGSC0003DMG400033878 Solanum tuberosum HOM05D008545 ORTHO05D010341 3.8e-11 72.8 165 30.3
MBI06_g22406_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D010341 9.2e-10 68.2 141 34.0
Migut.B01833 Erythranthe guttata HOM05D008545 ORTHO05D010341 1.7e-08 63.9 89 40.4
SGA_v2.0_scaffold5G02985 Striga asiatica HOM05D008545 ORTHO05D010341 3.9e-08 62.8 107 39.3
Sopen05g028690 Solanum pennellii HOM05D008545 ORTHO05D010341 2.5e-07 60.1 128 29.7
COL.COLO4_06334 Corchorus olitorius HOM05D002314 ORTHO05D002538 3.3e-07 59.7 52 53.8
MSTRG.17319 Avicennia marina HOM05D008545 ORTHO05D010341 1.2e-06 57.8 107 37.4
DCAR_008649 Daucus carota HOM05D008545 ORTHO05D010341 1.2e-06 57.8 164 29.9
Thecc.03G192100 Theobroma cacao HOM05D004891 ORTHO05D005997 8.1e-06 55.1 207 27.5
GSVIVG01028731001 Vitis vinifera HOM05D004891 ORTHO05D005997 8.1e-06 55.1 209 28.7


User provided reference genes

Program Settings