Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0357501 Rosa chinensis HOM05D009091 ORTHO05D003768 6.7e-70 267.3 142 100.0
RcHm_v2.0_Chr1g0315701 Rosa chinensis HOM05D009091 ORTHO05D003768 5.3e-67 257.7 138 99.3
RcHm_v2.0_Chr4g0420561 Rosa chinensis HOM05D009091 ORTHO05D003768 6.9e-59 230.7 136 91.9
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 1.1e-48 196.8 138 75.4
FvH4_5g18423 Fragaria vesca HOM05D009091 ORTHO05D000062 7.4e-45 184.1 138 72.5
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 1.3e-44 183.3 138 72.5
FvH4_4g10040 Fragaria vesca HOM05D009091 ORTHO05D003768 4.2e-40 168.3 136 69.1
FvH4_3g45091 Fragaria vesca HOM05D009091 ORTHO05D003768 6.3e-36 154.5 131 64.9
FAN22G1616 Fragaria x ananassa HOM05D009091 ORTHO05D003768 1.5e-29 133.3 97 72.2
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 2.0e-29 132.9 139 56.8
FAN08G3223 Fragaria x ananassa HOM05D009091 ORTHO05D003768 4.4e-29 131.7 93 74.2
RcHm_v2.0_Chr4g0433611 Rosa chinensis HOM05D009091 ORTHO05D003768 5.3e-27 124.8 141 52.5
RcHm_v2.0_Chr7g0231331 Rosa chinensis HOM05D009091 ORTHO05D003768 6.5e-17 91.3 62 80.6
RcHm_v2.0_Chr3g0496631 Rosa chinensis HOM05D009091 ORTHO05D003768 2.4e-11 72.8 37 94.6
Oeu048290.1 Olea europaea HOM05D009091 ORTHO05D003768 5.0e-09 65.1 109 36.7
CSS0010964 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 5.6e-08 61.6 124 33.9
Oeu041304.1 Olea europaea HOM05D009091 ORTHO05D003768 5.6e-08 61.6 140 34.3
CSS0021689 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 2.1e-07 59.7 90 40.0
Oeu005258.1 Olea europaea HOM05D009091 ORTHO05D003768 2.1e-07 59.7 90 38.9
CSS0049472 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 8.0e-07 57.8 136 34.6
Oeu050751.1 Olea europaea HOM05D009091 ORTHO05D003768 1.0e-06 57.4 127 34.6
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 5.2e-06 55.1 67 40.3
Sed0001060 Sechium edule HOM05D007314 ORTHO05D003768 5.2e-06 55.1 141 32.6
Oeu040990.1 Olea europaea HOM05D000700 ORTHO05D000397 6.8e-06 54.7 64 42.2
Oeu060777.1 Olea europaea HOM05D009091 ORTHO05D003768 6.8e-06 54.7 47 55.3
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 6.8e-06 54.7 136 29.4


User provided reference genes

Program Settings