Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0357201 Rosa chinensis HOM05D003847 ORTHO05D004976 6.3e-241 837.0 425 100.0
FAN06G3510 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.4e-234 814.3 423 97.6
FAN10G1372 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.8e-233 811.6 423 97.2
FAN10G2219 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.2e-231 806.2 423 96.7
FAN03G1748 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.7e-230 802.4 437 94.3
FAN01G0997 Fragaria x ananassa HOM05D003847 ORTHO05D004976 5.5e-229 797.3 414 97.6
Prupe.2G175500 Prunus persica HOM05D003847 ORTHO05D004976 2.0e-223 778.9 425 91.5
QL04p055042 Quercus lobata HOM05D003847 ORTHO05D004976 1.6e-220 769.2 424 89.2
MD01G1069400 Malus domestica HOM05D003847 ORTHO05D004976 8.0e-220 766.9 425 90.1
MELO3C006089.2 Cucumis melo HOM05D003847 ORTHO05D004976 8.9e-219 763.5 425 88.9
GSVIVG01026981001 Vitis vinifera HOM05D003847 ORTHO05D004976 7.5e-218 760.4 425 88.5
Ciclev10020054m.g Citrus clementina HOM05D003847 ORTHO05D004976 1.3e-217 759.6 422 88.2
CiPaw.01G065300 Carya illinoinensis HOM05D003847 ORTHO05D004976 1.7e-217 759.2 425 88.5
COL.COLO4_12761 Corchorus olitorius HOM05D003847 ORTHO05D004976 2.2e-217 758.8 425 87.8
CANSAT56G2934 Cannabis sativa HOM05D003847 ORTHO05D004976 3.7e-217 758.1 425 88.2
Gohir.A11G091500 Gossypium hirsutum HOM05D003847 ORTHO05D004976 6.4e-217 757.3 425 88.0
Gorai.007G102500 Gossypium raimondii HOM05D003847 ORTHO05D004976 6.4e-217 757.3 425 88.0
CsaV3_3G008710 Cucumis sativus L. HOM05D003847 ORTHO05D004976 1.1e-216 756.5 425 87.8
CSS0029735 Camellia sinensis var. sinensis HOM05D003847 ORTHO05D004976 2.4e-216 755.4 425 88.2
Manes.05G031000 Manihot esculenta HOM05D003847 ORTHO05D004976 3.2e-216 755.0 425 87.1
Hma1.2p1_0627F.1_g191710 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 4.1e-216 754.6 425 88.2
Gohir.D11G096200 Gossypium hirsutum HOM05D003847 ORTHO05D004976 2.0e-215 752.3 425 87.5
Thecc.01G354200 Theobroma cacao HOM05D003847 ORTHO05D004976 2.0e-215 752.3 425 87.5
Cc02_g38410 Coffea canephora HOM05D003847 ORTHO05D004976 3.5e-215 751.5 425 87.1
Sed0007018 Sechium edule HOM05D003847 ORTHO05D004976 1.3e-214 749.6 425 86.8
PGR042G1058 Punica granatum HOM05D003847 ORTHO05D004976 2.3e-214 748.8 425 86.6
Solyc01g094930.3 Solanum lycopersicum HOM05D003847 ORTHO05D004976 3.0e-214 748.4 425 86.4
Potri.014G088900 Populus trichocarpa HOM05D003847 ORTHO05D004976 3.9e-214 748.0 425 86.8
Sopen01g038710 Solanum pennellii HOM05D003847 ORTHO05D004976 5.0e-214 747.7 425 86.1
Potri.002G162700 Populus trichocarpa HOM05D003847 ORTHO05D004976 8.6e-214 746.9 425 86.6
arahy.Tifrunner.gnm1.ann1.9YV9D4 Arachis hypogaea HOM05D003847 ORTHO05D004976 2.1e-212 742.3 422 85.8
arahy.Tifrunner.gnm1.ann1.P1PLPP Arachis hypogaea HOM05D003847 ORTHO05D004976 6.2e-212 740.7 422 85.8
CAN.G78.110 Capsicum annuum HOM05D003847 ORTHO05D004976 1.1e-211 740.0 425 85.9
TWI59G0695 Tripterygium wilfordii HOM05D003847 ORTHO05D004976 1.1e-211 740.0 425 84.9
Duzib133G1387 Durio zibethinus HOM05D003847 ORTHO05D004976 1.4e-211 739.6 417 87.5
Lalb_Chr04g0259201 Lupinus albus HOM05D003847 ORTHO05D004976 1.4e-211 739.6 425 84.9
Actinidia02826 Actinidia chinensis HOM05D003847 ORTHO05D004976 8.9e-211 736.9 425 85.9
Ca_00820_v3 Cicer arietinum L. HOM05D003847 ORTHO05D004976 1.2e-210 736.5 421 86.0
Lj1g0024026 Lotus japonicus HOM05D003847 ORTHO05D004976 1.5e-210 736.1 425 84.5
Glyma.18G237300 Glycine max HOM05D003847 ORTHO05D004976 2.0e-210 735.7 425 84.9
Migut.N01455 Erythranthe guttata HOM05D003847 ORTHO05D004976 3.4e-210 734.9 425 84.5
DCAR_008629 Daucus carota HOM05D003847 ORTHO05D004976 4.4e-210 734.6 425 85.4
Eucgr.D02317 Eucalyptus grandis HOM05D003847 ORTHO05D004976 5.8e-210 734.2 425 85.4
VMungo1383G0817 Vigna mungo HOM05D003847 ORTHO05D004976 7.5e-210 733.8 425 83.8
Glyma.09G255600 Glycine max HOM05D003847 ORTHO05D004976 1.3e-209 733.0 425 84.7
DCAR_025211 Daucus carota HOM05D003847 ORTHO05D004976 3.7e-209 731.5 425 84.7
Phvul.008G059300 Phaseolus vulgaris HOM05D003847 ORTHO05D004976 6.4e-209 730.7 425 84.0
Nn1g01640 Nelumbo nucifera HOM05D003847 ORTHO05D004976 8.3e-209 730.3 425 83.8
Sabra14G0064600 Salix brachista HOM05D003847 ORTHO05D004976 8.3e-209 730.3 415 87.0
RcHm_v2.0_Chr1g0357211 Rosa chinensis HOM05D003847 ORTHO05D004976 1.1e-208 729.9 425 85.9
Medtr7g078760 Medicago truncatula HOM05D003847 ORTHO05D004976 1.4e-208 729.6 427 83.8
FAN10G0014 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.1e-208 728.0 425 85.6
THA.LOC104825858 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 4.1e-208 728.0 425 85.4
FvH4_7g15083 Fragaria vesca HOM05D003847 ORTHO05D004976 7.0e-208 727.2 425 85.6
A09p00040 Brassica napus HOM05D003847 ORTHO05D004976 2.0e-207 725.7 425 84.9
BraA09t35735Z Brassica rapa HOM05D003847 ORTHO05D004976 2.7e-207 725.3 425 84.7
THA.LOC104817033 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 2.7e-207 725.3 423 84.6
ECA234G3268 Erigeron canadensis HOM05D003847 ORTHO05D004976 3.5e-207 724.9 423 84.6
AUR62022605 Chenopodium quinoa HOM05D003847 ORTHO05D004976 4.6e-207 724.5 426 84.0
Sabra02G0147800 Salix brachista HOM05D003847 ORTHO05D004976 4.6e-207 724.5 449 81.3
SGA_v2.0_scaffold43G16402 Striga asiatica HOM05D003847 ORTHO05D004976 6.0e-207 724.2 425 83.3
BcaC04g24142 Brassica carinata HOM05D003847 ORTHO05D004976 7.8e-207 723.8 425 84.5
C09p00660 Brassica napus HOM05D003847 ORTHO05D004976 7.8e-207 723.8 425 84.5
HanXRQChr17g0562361 Helianthus annuus HOM05D003847 ORTHO05D004976 1.3e-206 723.0 425 84.2
C03p39000 Brassica napus HOM05D003847 ORTHO05D004976 1.7e-206 722.6 425 84.2
BolC3t16172H Brassica oleracea HOM05D003847 ORTHO05D004976 1.7e-206 722.6 425 84.2
BraA03t12370Z Brassica rapa HOM05D003847 ORTHO05D004976 1.7e-206 722.6 425 84.5
CDE11G0931 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 1.7e-206 722.6 425 83.1
AUR62004399 Chenopodium quinoa HOM05D003847 ORTHO05D004976 1.7e-206 722.6 426 83.6
BolC9t53000H Brassica oleracea HOM05D003847 ORTHO05D004976 2.3e-206 722.2 425 84.0
BcaB01g02281 Brassica carinata HOM05D003847 ORTHO05D004976 5.0e-206 721.1 425 84.2
Thhalv10028603m.g Eutrema salsugineum HOM05D003847 ORTHO05D004976 5.0e-206 721.1 425 84.5
Aqoxy5G04080 Aquilegia oxysepala HOM05D003847 ORTHO05D004976 8.6e-206 720.3 425 83.5
BcaB01g02153 Brassica carinata HOM05D003847 ORTHO05D004976 1.5e-205 719.5 420 84.8
Lsat_1_v5_gn_4_34641 Lactuca sativa HOM05D003847 ORTHO05D004976 1.9e-205 719.2 425 83.5
Hund16669 Selenicereus undatus HOM05D003847 ORTHO05D004976 2.5e-205 718.8 426 83.8
TPR.G22298 Trifolium pratense HOM05D003847 ORTHO05D004976 3.3e-205 718.4 417 84.9
BcaC01g06856 Brassica carinata HOM05D003847 ORTHO05D004976 1.2e-204 716.5 420 84.5
CARHR249000 Cardamine hirsuta HOM05D003847 ORTHO05D004976 1.2e-204 716.5 425 84.5
AT4G01320 Arabidopsis thaliana HOM05D003847 ORTHO05D004976 2.1e-204 715.7 425 84.5
Sp6g00820 Schrenkiella parvula HOM05D003847 ORTHO05D004976 2.8e-204 715.3 425 83.8
Carub.0006s3638 Capsella rubella HOM05D003847 ORTHO05D004976 4.7e-204 714.5 425 84.2
CDE09G0314 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 6.2e-204 714.1 425 82.1
Lj9C587T13 Lonicera japonica HOM05D003847 ORTHO05D004976 8.1e-204 713.8 425 84.0
A03p31980 Brassica napus HOM05D003847 ORTHO05D004976 4.0e-203 711.4 415 85.3
Sabra02G0148200 Salix brachista HOM05D003847 ORTHO05D004976 6.8e-203 710.7 471 77.5
Sc26g0000820 Simmondsia chinensis HOM05D003847 ORTHO05D004976 1.5e-202 709.5 425 82.6
EL10Ac1g00369 Beta vulgaris HOM05D003847 ORTHO05D004976 7.5e-202 707.2 438 81.3
MSTRG.28227 Avicennia marina HOM05D003847 ORTHO05D004976 9.9e-202 706.8 425 82.4
Os02g0680400 Oryza sativa ssp. japonica HOM05D003847 ORTHO05D004976 2.2e-201 705.7 424 82.1
Zm00001eb187240 Zea mays HOM05D003847 ORTHO05D004976 1.4e-200 703.0 426 82.4
AL6G52080 Arabidopsis lyrata HOM05D003847 ORTHO05D004976 2.1e-199 699.1 413 85.2
FAN03G0710 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.6e-199 698.0 419 83.8
ATR0661G289 Amborella trichopoda HOM05D003847 ORTHO05D004976 6.0e-199 697.6 422 80.3
Atru.chr5.1381 Acer truncatum HOM05D003847 ORTHO05D004976 2.5e-197 692.2 420 80.7
PSO478G2530 Papaver somniferum HOM05D003847 ORTHO05D004976 1.3e-193 679.9 422 78.9
SEGI_36957 Sequoiadendron giganteum HOM05D003847 ORTHO05D004976 1.3e-193 679.9 422 78.7
PSO782G0912 Papaver somniferum HOM05D003847 ORTHO05D004976 4.9e-193 677.9 422 78.7
ClCG05G001330 Citrullus lanatus HOM05D003847 ORTHO05D004976 5.4e-192 674.5 425 80.0
Haze_15549 Corylus avellana HOM05D003847 ORTHO05D004976 5.4e-192 674.5 425 80.7
Duzib138G0396 Durio zibethinus HOM05D003847 ORTHO05D004976 2.7e-191 672.2 425 79.5
Dinv43851 Davidia involucrata HOM05D003847 ORTHO05D004976 3.3e-189 665.2 425 79.3
Nitab4.5_0003779g0180 Nicotiana tabacum HOM05D003847 ORTHO05D004976 4.3e-189 664.8 425 78.6
MBI04_g26959_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D004976 4.7e-188 661.4 425 78.4
Nitab4.5_0001702g0130 Nicotiana tabacum HOM05D003847 ORTHO05D004976 1.4e-187 659.8 433 77.8
FvH4_7g15084 Fragaria vesca HOM05D003847 ORTHO05D004976 1.8e-187 659.4 426 78.9
Pp3c4_3300 Physcomitrium patens HOM05D003847 ORTHO05D004976 5.2e-187 657.9 423 75.9
FAN10G3576 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.2e-186 656.8 416 80.0
Mapoly0151s0045 Marchantia polymorpha HOM05D003847 ORTHO05D004976 2.0e-186 656.0 423 76.4
FAN06G4494 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.4e-186 655.2 406 81.8
AagrBONN_evm.TU.Sc2ySwM_344.5530 Anthoceros agrestis HOM05D003847 ORTHO05D004976 7.6e-186 654.1 423 75.4
FAN06G0785 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.3e-185 653.3 412 80.8
Pp3c12_25070 Physcomitrium patens HOM05D003847 ORTHO05D004976 2.2e-185 652.5 423 75.2
FvH4_7g15081 Fragaria vesca HOM05D003847 ORTHO05D004976 3.8e-185 651.7 359 92.5
TAR629G0433 Trochodendron aralioides HOM05D003847 ORTHO05D004976 7.1e-184 647.5 416 78.6
Cfa003885 Carpinus fangiana HOM05D003847 ORTHO05D004976 1.7e-182 642.9 401 82.0
vmacro20904 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 1.5e-181 639.8 417 78.2
Oeu015226.2 Olea europaea HOM05D003847 ORTHO05D004976 2.5e-181 639.0 413 78.7
RcHm_v2.0_Chr1g0357271 Rosa chinensis HOM05D003847 ORTHO05D004976 3.3e-181 638.6 410 79.8
Nitab4.5_0001269g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 5.6e-181 637.9 415 77.6
SalBow5G2471 Salvia bowleyana HOM05D003847 ORTHO05D004976 6.2e-180 634.4 442 73.1
Oeu036597.2 Olea europaea HOM05D003847 ORTHO05D004976 1.1e-179 633.6 611 57.3
Nitab4.5_0011900g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 1.4e-179 633.3 475 70.9
arahy.Tifrunner.gnm1.ann1.W45FS6 Arachis hypogaea HOM05D003847 ORTHO05D004976 3.1e-179 632.1 422 75.6
FAN06G4922 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.6e-178 629.0 413 78.9
SMO364G0773 Selaginella moellendorffii HOM05D003847 ORTHO05D004976 2.6e-178 629.0 425 71.8
Psat3g106680 Pisum sativum HOM05D003847 ORTHO05D004976 6.4e-177 624.4 364 84.1
TAR375G0471 Trochodendron aralioides HOM05D003847 ORTHO05D004976 3.3e-173 612.1 353 83.3
FAN10G3432 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.8e-171 606.3 413 74.6
Atru.chr5.547 Acer truncatum HOM05D003847 ORTHO05D004976 4.9e-169 598.2 347 84.4
Dinv32510 Davidia involucrata HOM05D003847 ORTHO05D004976 1.9e-168 596.3 348 85.6
Sed0024082 Sechium edule HOM05D003847 ORTHO05D004976 2.7e-167 592.4 340 86.5
HanXRQChr16g0521861 Helianthus annuus HOM05D003847 ORTHO05D004976 5.6e-165 584.7 430 70.2
HanXRQChr16g0521851 Helianthus annuus HOM05D003847 ORTHO05D004976 1.1e-163 580.5 410 71.2
vmacro04325 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 2.6e-162 575.9 431 68.4
FAN10G2623 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.7e-161 573.2 399 74.7
Peaxi162Scf00020g01122 Petunia axillaris HOM05D003847 ORTHO05D004976 2.1e-159 566.2 415 70.6
CBR_g23782 Chara braunii HOM05D003847 ORTHO05D004976 3.9e-158 562.0 411 65.7
HPP92_022235 Vanilla planifolia HOM05D003847 ORTHO05D004976 6.5e-153 544.7 314 85.7
FAN01G2116 Fragaria x ananassa HOM05D003847 ORTHO05D004976 7.9e-151 537.7 411 70.6
Aa31LG5G720 Aethionema arabicum HOM05D003847 ORTHO05D004976 3.8e-145 518.8 303 84.8
QL12p031965 Quercus lobata HOM05D003847 ORTHO05D004976 3.8e-145 518.8 423 60.8
arahy.Tifrunner.gnm1.ann1.U13Q33 Arachis hypogaea HOM05D003847 ORTHO05D004976 1.1e-133 480.7 281 82.9
TAR636G3069 Trochodendron aralioides HOM05D003847 ORTHO05D004976 4.8e-132 475.3 286 80.8
Medtr8g028680 Medicago truncatula HOM05D003847 ORTHO05D004976 1.1e-128 464.2 444 57.7
Hund27252 Selenicereus undatus HOM05D003847 ORTHO05D004976 1.8e-126 456.8 435 55.9
Cre07.g356150 Chlamydomonas reinhardtii HOM05D003847 ORTHO05D004976 1.8e-115 420.2 434 51.4
MSTRG.4846 Avicennia marina HOM05D003847 ORTHO05D004976 3.5e-114 416.0 237 86.9
Psat2g071920 Pisum sativum HOM05D003847 ORTHO05D004976 1.2e-109 401.0 252 78.6
PRCOL_00003828 Prasinoderma coloniale HOM05D003847 ORTHO05D004976 9.8e-101 371.3 436 46.8
vmacro05292 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 6.8e-94 348.6 465 45.4
Gohir.A13G099905 Gossypium hirsutum HOM05D003847 ORTHO05D004976 1.8e-86 323.9 199 80.9
Cpa.g.sc184.22 Carica papaya HOM05D003847 ORTHO05D004976 4.9e-84 315.8 171 88.3
Haze_26886 Corylus avellana HOM05D003847 ORTHO05D004976 3.9e-81 306.2 410 41.7
vmacro05290 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 3.3e-72 276.6 239 61.5
Psat1g001760 Pisum sativum HOM05D003847 ORTHO05D004976 5.6e-72 275.8 168 79.8
unitig_22.g6721 Utricularia gibba HOM05D001167 ORTHO05D001054 7.6e-69 265.4 155 79.4
Hma1.2p1_0456F.1_g156440 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 9.3e-67 258.5 173 74.0
Atru.chr12.614 Acer truncatum HOM05D003847 ORTHO05D004976 1.8e-57 227.6 161 70.8
CANSAT25G3593 Cannabis sativa HOM05D003847 ORTHO05D004976 2.5e-56 223.8 158 74.1
SalBow5G1235 Salvia bowleyana HOM05D003847 ORTHO05D004976 1.6e-55 221.1 253 51.4
RcHm_v2.0_Chr3g0493601 Rosa chinensis HOM05D003847 ORTHO05D004976 4.6e-42 176.4 96 92.7
Mapoly1163s0001 Marchantia polymorpha HOM05D003847 ORTHO05D026554 8.2e-31 139.0 86 79.1
CANSAT25G0211 Cannabis sativa HOM05D003847 ORTHO05D004976 3.1e-30 137.1 86 76.7
COL.COLO4_08374 Corchorus olitorius HOM05D000137 ORTHO05D000382 1.2e-29 135.2 242 36.0
SGA_v2.0_scaffold190G40413 Striga asiatica HOM05D003847 ORTHO05D004976 4.5e-29 133.3 126 60.3
TAR365G1016 Trochodendron aralioides HOM05D000001 ORTHO05D000003 1.4e-22 111.7 72 75.0
Psat5g164800 Pisum sativum HOM05D003847 ORTHO05D004976 2.2e-20 104.4 129 48.1
HanXRQChr14g0436691 Helianthus annuus HOM05D003847 ORTHO05D025737 9.4e-19 99.0 55 81.8
Medtr4g065940 Medicago truncatula HOM05D003847 ORTHO05D004976 2.7e-18 97.4 95 57.9
ATR0763G219 Amborella trichopoda HOM05D003847 ORTHO05D026554 2.3e-17 94.4 58 75.9
Lsat_1_v5_gn_8_14540 Lactuca sativa HOM05D003847 ORTHO05D005301 5.7e-16 89.7 168 38.1
RcHm_v2.0_Chr2g0131551 Rosa chinensis HOM05D003847 ORTHO05D025737 5.7e-16 89.7 55 72.7
RcHm_v2.0_Chr1g0357221 Rosa chinensis HOM05D003847 ORTHO05D026554 2.4e-14 84.3 230 30.0
MBI19_g13733_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D011443 1.5e-11 75.1 48 75.0
Lsat_1_v5_gn_3_43021 Lactuca sativa HOM05D003847 ORTHO05D028506 1.4e-09 68.6 71 53.5
Lsat_1_v5_gn_2_83340 Lactuca sativa HOM05D003847 ORTHO05D028506 1.8e-09 68.2 47 70.2
CAN.G13.12 Capsicum annuum HOM05D002403 ORTHO05D028506 3.0e-09 67.4 42 73.8
Lsat_1_v5_gn_9_59821 Lactuca sativa HOM05D000726 ORTHO05D025737 1.5e-08 65.1 32 87.5
Lsat_1_v5_gn_8_143621 Lactuca sativa HOM05D003847 ORTHO05D028506 2.0e-08 64.7 46 65.2
BcaC03g16052 Brassica carinata HOM05D003847 ORTHO05D004976 3.4e-08 63.9 38 84.2
vmacro05291 Vaccinium macrocarpon HOM05D003847 ORTHO05D026554 3.4e-08 63.9 47 66.0
CAN.G1511.3 Capsicum annuum HOM05D002403 ORTHO05D002724 6.3e-07 59.7 30 86.7


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