Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0356231 Rosa chinensis HOM05D000021 ORTHO05D345067 2.8e-49 199.1 177 100.0
RcHm_v2.0_Chr1g0356511 Rosa chinensis HOM05D000021 ORTHO05D000010 4.2e-13 79.0 37 100.0
Prupe.2G279600 Prunus persica HOM05D000021 ORTHO05D000010 9.7e-10 67.8 40 77.5
Eucgr.F02342 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.4e-08 63.9 38 76.3
RcHm_v2.0_Chr5g0043431 Rosa chinensis HOM05D000021 ORTHO05D000010 1.4e-08 63.9 36 80.6
RcHm_v2.0_Chr5g0043461 Rosa chinensis HOM05D000021 ORTHO05D000010 4.1e-08 62.4 37 78.4
Prupe.8G139600 Prunus persica HOM05D000021 ORTHO05D000010 2.0e-07 60.1 39 71.8
FvH4_7g14700 Fragaria vesca HOM05D000021 ORTHO05D000010 4.5e-07 58.9 36 69.4
MD00G1105400 Malus domestica HOM05D000021 ORTHO05D000010 5.9e-07 58.5 37 67.6
Potri.011G102800 Populus trichocarpa HOM05D000021 ORTHO05D000010 5.9e-07 58.5 38 68.4
Eucgr.F01797 Eucalyptus grandis HOM05D000021 ORTHO05D000010 7.7e-07 58.2 38 71.1
Eucgr.E01867 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.0e-06 57.8 36 72.2
Eucgr.F01801 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.0e-06 57.8 38 68.4
FAN25G3462 Fragaria x ananassa HOM05D000021 ORTHO05D000010 1.0e-06 57.8 38 68.4
RcHm_v2.0_Chr1g0355521 Rosa chinensis HOM05D000021 ORTHO05D000010 1.0e-06 57.8 36 75.0
RcHm_v2.0_Chr1g0355911 Rosa chinensis HOM05D000021 ORTHO05D000010 1.3e-06 57.4 39 71.8
vmacro10334 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 1.3e-06 57.4 40 67.5
FAN06G2572 Fragaria x ananassa HOM05D000021 ORTHO05D000010 1.7e-06 57.0 36 66.7
MD07G1218400 Malus domestica HOM05D000021 ORTHO05D000010 1.7e-06 57.0 40 60.0
PGR042G2217 Punica granatum HOM05D000021 ORTHO05D000010 1.7e-06 57.0 39 69.2
Atru.chr2.929 Acer truncatum HOM05D000021 ORTHO05D000010 2.2e-06 56.6 40 65.0
Ciclev10030587m.g Citrus clementina HOM05D000021 ORTHO05D000010 2.9e-06 56.2 38 65.8
FvH4_7g27170 Fragaria vesca HOM05D000021 ORTHO05D000010 2.9e-06 56.2 39 69.2
FvH4_7g27220 Fragaria vesca HOM05D000021 ORTHO05D000010 2.9e-06 56.2 39 64.1
FAN14G3531 Fragaria x ananassa HOM05D000021 ORTHO05D000010 2.9e-06 56.2 38 71.1
Eucgr.A00282 Eucalyptus grandis HOM05D000021 ORTHO05D000010 3.8e-06 55.8 38 68.4
Eucgr.E01842 Eucalyptus grandis HOM05D000021 ORTHO05D000010 3.8e-06 55.8 38 68.4
Eucgr.F01162 Eucalyptus grandis HOM05D000021 ORTHO05D000010 3.8e-06 55.8 36 69.4
Eucgr.F02344 Eucalyptus grandis HOM05D000021 ORTHO05D000010 3.8e-06 55.8 37 70.3
FAN03G0641 Fragaria x ananassa HOM05D000021 ORTHO05D000010 3.8e-06 55.8 36 66.7
MD07G1219600 Malus domestica HOM05D000021 ORTHO05D000010 3.8e-06 55.8 37 62.2
Eucgr.F04081 Eucalyptus grandis HOM05D000021 ORTHO05D000010 5.0e-06 55.5 37 70.3
Eucgr.I00485 Eucalyptus grandis HOM05D000021 ORTHO05D000010 5.0e-06 55.5 39 66.7
Eucgr.L01229 Eucalyptus grandis HOM05D000021 ORTHO05D000010 5.0e-06 55.5 37 70.3
MD03G1072600 Malus domestica HOM05D000021 ORTHO05D000010 5.0e-06 55.5 39 66.7
Manes.10G114650 Manihot esculenta HOM05D000021 ORTHO05D000010 5.0e-06 55.5 38 68.4
FAN06G1906 Fragaria x ananassa HOM05D000021 ORTHO05D000010 6.5e-06 55.1 37 70.3
FAN06G2785 Fragaria x ananassa HOM05D000021 ORTHO05D029733 6.5e-06 55.1 37 70.3
MD11G1261100 Malus domestica HOM05D000021 ORTHO05D000010 6.5e-06 55.1 38 63.2
PGR042G3291 Punica granatum HOM05D000021 ORTHO05D000010 6.5e-06 55.1 39 69.2
FAN06G4242 Fragaria x ananassa HOM05D000021 ORTHO05D000010 8.5e-06 54.7 37 64.9
MD15G1106800 Malus domestica HOM05D000021 ORTHO05D000010 8.5e-06 54.7 40 65.0


User provided reference genes

Program Settings