Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0355511 Rosa chinensis HOM05D000021 ORTHO05D029733 1.5e-44 183.0 125 100.0
RcHm_v2.0_Chr1g0355921 Rosa chinensis HOM05D000021 ORTHO05D029733 3.5e-22 108.6 117 69.2
RcHm_v2.0_Chr5g0043501 Rosa chinensis HOM05D000021 ORTHO05D000010 2.8e-19 99.0 116 70.7
QL04p015364 Quercus lobata HOM05D000021 ORTHO05D000010 4.9e-16 88.2 115 44.3
FAN03G2337 Fragaria x ananassa HOM05D000021 ORTHO05D000010 8.3e-16 87.4 108 63.0
Sabra11G0077900 Salix brachista HOM05D000021 ORTHO05D000010 1.4e-15 86.7 116 53.4
Sabra11G0083000 Salix brachista HOM05D000021 ORTHO05D000010 1.4e-15 86.7 116 53.4
Sabra11G0082900 Salix brachista HOM05D000021 ORTHO05D000010 1.6e-14 83.2 116 37.1
FAN10G2926 Fragaria x ananassa HOM05D000021 ORTHO05D000010 2.7e-14 82.4 104 46.2
vmacro08142 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 6.0e-14 81.3 115 39.1
FAN06G2394 Fragaria x ananassa HOM05D000021 ORTHO05D000010 1.0e-13 80.5 108 60.2
FAN06G1786 Fragaria x ananassa HOM05D000021 ORTHO05D000010 5.1e-13 78.2 94 45.7
MD11G1106200 Malus domestica HOM05D000021 ORTHO05D000010 1.9e-12 76.3 94 41.5
FAN10G3595 Fragaria x ananassa HOM05D000021 ORTHO05D000010 3.3e-12 75.5 94 40.4
MD11G1104000 Malus domestica HOM05D000021 ORTHO05D000010 4.3e-12 75.1 94 47.9
MD11G1106800 Malus domestica HOM05D000021 ORTHO05D000010 4.3e-12 75.1 97 42.3
FAN03G3324 Fragaria x ananassa HOM05D000021 ORTHO05D000010 5.6e-12 74.7 117 33.3
Prupe.2G116200 Prunus persica HOM05D000021 ORTHO05D000010 5.6e-12 74.7 111 36.0
Sabra11G0077700 Salix brachista HOM05D000021 ORTHO05D000010 5.6e-12 74.7 105 50.5
Sabra11G0082600 Salix brachista HOM05D000021 ORTHO05D000010 5.6e-12 74.7 105 51.4
MD01G1097800 Malus domestica HOM05D000021 ORTHO05D000010 1.6e-11 73.2 111 47.7
MD07G1219300 Malus domestica HOM05D000021 ORTHO05D000010 2.1e-11 72.8 116 33.6
FAN10G1011 Fragaria x ananassa HOM05D000021 ORTHO05D000010 6.2e-11 71.2 94 40.4
FAN06G2723 Fragaria x ananassa HOM05D000021 ORTHO05D000010 8.1e-11 70.9 89 42.7
FvH4_3g24240 Fragaria vesca HOM05D000021 ORTHO05D000010 2.3e-10 69.3 86 76.7
FAN11G0634 Fragaria x ananassa HOM05D000021 ORTHO05D000010 2.3e-10 69.3 86 77.9
MD01G1112100 Malus domestica HOM05D000021 ORTHO05D000010 4.0e-10 68.6 117 48.7
RcHm_v2.0_Chr5g0043461 Rosa chinensis HOM05D000021 ORTHO05D000010 2.0e-09 66.2 84 77.4
AUR62016692 Chenopodium quinoa HOM05D000021 ORTHO05D000010 3.4e-09 65.5 121 56.2
MD01G1096400 Malus domestica HOM05D000021 ORTHO05D000010 4.4e-09 65.1 111 52.3
FAN06G2785 Fragaria x ananassa HOM05D000021 ORTHO05D029733 5.8e-09 64.7 117 50.4
FAN03G0892 Fragaria x ananassa HOM05D000021 ORTHO05D000010 9.9e-09 63.9 48 56.2
RcHm_v2.0_Chr1g0356561 Rosa chinensis HOM05D000021 ORTHO05D000010 9.9e-09 63.9 84 41.7
Eucgr.F02272 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.3e-08 63.5 116 31.9
Duzib106G0924 Durio zibethinus HOM05D000021 ORTHO05D000010 2.2e-08 62.8 117 43.6
FAN10G0263 Fragaria x ananassa HOM05D002506 ORTHO05D000010 2.2e-08 62.8 88 42.0
FAN10G4007 Fragaria x ananassa HOM05D000021 ORTHO05D000010 2.2e-08 62.8 88 42.0
Duzib106G1858 Durio zibethinus HOM05D000021 ORTHO05D000010 4.9e-08 61.6 116 48.3
Lsat_1_v5_gn_1_43641 Lactuca sativa HOM05D000021 ORTHO05D000010 6.4e-08 61.2 107 43.0
FAN10G0116 Fragaria x ananassa HOM05D000021 ORTHO05D000010 1.1e-07 60.5 93 52.7
RcHm_v2.0_Chr1g0325541 Rosa chinensis HOM05D000021 ORTHO05D000010 1.4e-07 60.1 86 70.9
MD11G1107200 Malus domestica HOM05D000021 ORTHO05D000010 1.9e-07 59.7 142 47.9
FAN03G0852 Fragaria x ananassa HOM05D000021 ORTHO05D000010 2.4e-07 59.3 85 70.6
RcHm_v2.0_Chr1g0331671 Rosa chinensis HOM05D000021 ORTHO05D000010 2.4e-07 59.3 85 72.9
RcHm_v2.0_Chr7g0215121 Rosa chinensis HOM05D000021 ORTHO05D000010 2.4e-07 59.3 37 78.4
FvH4_7g14500 Fragaria vesca HOM05D000021 ORTHO05D000010 3.2e-07 58.9 135 32.6
FAN03G0641 Fragaria x ananassa HOM05D000021 ORTHO05D000010 4.1e-07 58.5 93 64.5
Peaxi162Scf00136g01814 Petunia axillaris HOM05D000021 ORTHO05D000010 4.1e-07 58.5 116 53.4
QL04p015639 Quercus lobata HOM05D000021 ORTHO05D000010 4.1e-07 58.5 98 39.8
EL10Ac9g21768 Beta vulgaris HOM05D000021 ORTHO05D000010 7.1e-07 57.8 103 59.2
FAN03G0815 Fragaria x ananassa HOM05D000021 ORTHO05D000010 7.1e-07 57.8 85 70.6
Prupe.6G248200 Prunus persica HOM05D000021 ORTHO05D000010 7.1e-07 57.8 117 34.2
Prupe.2G279600 Prunus persica HOM05D000021 ORTHO05D000010 1.2e-06 57.0 37 67.6
Thecc.05G018800 Theobroma cacao HOM05D000021 ORTHO05D000010 1.2e-06 57.0 116 33.6
FAN10G0056 Fragaria x ananassa HOM05D000021 ORTHO05D000010 1.6e-06 56.6 41 63.4
FAN10G1127 Fragaria x ananassa HOM05D000021 ORTHO05D000010 1.6e-06 56.6 85 69.4
CSS0038316 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 2.1e-06 56.2 93 37.6
FvH4_7g14410 Fragaria vesca HOM05D000021 ORTHO05D000010 2.1e-06 56.2 37 70.3
FAN03G0171 Fragaria x ananassa HOM05D000021 ORTHO05D000010 2.1e-06 56.2 85 37.6
FAN06G1522 Fragaria x ananassa HOM05D000021 ORTHO05D000010 2.1e-06 56.2 37 70.3
RcHm_v2.0_Chr5g0043431 Rosa chinensis HOM05D000021 ORTHO05D000010 2.1e-06 56.2 37 67.6
AUR62011366 Chenopodium quinoa HOM05D000021 ORTHO05D000010 2.7e-06 55.8 93 35.5
Ciclev10018315m.g Citrus clementina HOM05D000021 ORTHO05D000010 2.7e-06 55.8 116 49.1
MBI04_g13685_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 2.7e-06 55.8 112 42.0
RcHm_v2.0_Chr4g0408081 Rosa chinensis HOM05D000021 ORTHO05D000010 2.7e-06 55.8 37 70.3
Eucgr.L00221 Eucalyptus grandis HOM05D000021 ORTHO05D000010 4.6e-06 55.1 109 28.4
FAN01G1947 Fragaria x ananassa HOM05D000021 ORTHO05D000010 4.6e-06 55.1 37 70.3
MD10G1304200 Malus domestica HOM05D000021 ORTHO05D000010 4.6e-06 55.1 85 65.9
RcHm_v2.0_Chr5g0043551 Rosa chinensis HOM05D000021 ORTHO05D000010 4.6e-06 55.1 37 64.9
FvH4_7g27212 Fragaria vesca HOM05D000021 ORTHO05D000010 6.0e-06 54.7 41 63.4
FAN01G1177 Fragaria x ananassa HOM05D000021 ORTHO05D000010 6.0e-06 54.7 37 67.6
FAN03G3326 Fragaria x ananassa HOM05D000021 ORTHO05D000010 6.0e-06 54.7 41 63.4
FAN10G3050 Fragaria x ananassa HOM05D000021 ORTHO05D000010 6.0e-06 54.7 41 63.4
FAN25G2874 Fragaria x ananassa HOM05D000021 ORTHO05D029733 6.0e-06 54.7 83 72.3
MD00G1178900 Malus domestica HOM05D000021 ORTHO05D000010 6.0e-06 54.7 89 65.2
MD03G1090600 Malus domestica HOM05D000021 ORTHO05D000010 6.0e-06 54.7 36 69.4
RcHm_v2.0_Chr1g0341681 Rosa chinensis HOM05D000021 ORTHO05D000010 6.0e-06 54.7 36 69.4
MD11G1102300 Malus domestica HOM05D000021 ORTHO05D000010 7.8e-06 54.3 41 58.5
MD11G1107800 Malus domestica HOM05D000021 ORTHO05D000010 7.8e-06 54.3 37 64.9
MD15G1439200 Malus domestica HOM05D000021 ORTHO05D000010 7.8e-06 54.3 85 68.2


User provided reference genes

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