Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0353031 Rosa chinensis HOM05D009250 ORTHO05D011052 1.4e-90 336.3 167 100.0
FvH4_7g13511 Fragaria vesca HOM05D009250 ORTHO05D011052 3.0e-61 238.8 144 79.9
FAN06G2339 Fragaria x ananassa HOM05D009250 ORTHO05D011052 8.7e-61 237.3 144 79.2
FAN06G0178 Fragaria x ananassa HOM05D009250 ORTHO05D011052 3.3e-60 235.3 144 80.6
FAN01G2465 Fragaria x ananassa HOM05D009250 ORTHO05D011052 3.7e-35 152.1 144 61.1
Prupe.2G158900 Prunus persica HOM05D009250 ORTHO05D011052 1.7e-24 116.7 137 48.9
MD01G1048700 Malus domestica HOM05D009250 ORTHO05D011052 9.7e-20 100.9 155 43.2
RcHm_v2.0_Chr2g0142351 Rosa chinensis HOM05D009250 ORTHO05D011052 1.7e-16 90.1 50 78.0
Ca_25781_v3 Cicer arietinum L. HOM05D009250 ORTHO05D011052 1.1e-15 87.4 95 45.3
Gohir.D07G149500 Gossypium hirsutum HOM05D009250 ORTHO05D011052 4.2e-15 85.5 64 60.9
Duzib138G0906 Durio zibethinus HOM05D009250 ORTHO05D011052 5.5e-15 85.1 148 37.8
Gorai.001G170900 Gossypium raimondii HOM05D009250 ORTHO05D011052 1.6e-14 83.6 64 59.4
Gohir.A07G143700 Gossypium hirsutum HOM05D009250 ORTHO05D011052 4.7e-14 82.0 141 39.0
Prupe.8G202600 Prunus persica HOM05D009250 ORTHO05D011052 1.0e-13 80.9 71 50.7
Duzib133G0111 Durio zibethinus HOM05D009250 ORTHO05D011052 1.8e-13 80.1 74 50.0
Prupe.8G202700 Prunus persica HOM05D009250 ORTHO05D011052 2.3e-13 79.7 74 48.6
Thecc.01G365700 Theobroma cacao HOM05D009250 ORTHO05D011052 6.7e-13 78.2 146 34.9
Gohir.D02G023500 Gossypium hirsutum HOM05D009250 ORTHO05D011052 4.4e-12 75.5 77 46.8
Gorai.005G029500 Gossypium raimondii HOM05D009250 ORTHO05D011052 4.4e-12 75.5 77 46.8
Gohir.D02G023600 Gossypium hirsutum HOM05D009250 ORTHO05D011052 1.3e-11 73.9 57 52.6
Gorai.005G029700 Gossypium raimondii HOM05D009250 ORTHO05D011052 1.3e-11 73.9 57 52.6
Gohir.A02G020200 Gossypium hirsutum HOM05D009250 ORTHO05D011052 1.7e-11 73.6 57 52.6
Gohir.A02G020100 Gossypium hirsutum HOM05D009250 ORTHO05D011052 2.8e-11 72.8 73 50.7
PGR042G1809 Punica granatum HOM05D009250 ORTHO05D011052 3.7e-11 72.4 73 50.7
Thecc.04G197800 Theobroma cacao HOM05D009250 ORTHO05D011052 4.1e-10 68.9 61 49.2
TWI23G0141 Tripterygium wilfordii HOM05D009250 ORTHO05D011052 4.1e-10 68.9 81 45.7
Thecc.04G197600 Theobroma cacao HOM05D009250 ORTHO05D011052 1.6e-09 67.0 58 50.0
Medtr8g032290 Medicago truncatula HOM05D020614 ORTHO05D011052 2.7e-09 66.2 61 49.2
THA.LOC104817277 Tarenaya hassleriana HOM05D009250 ORTHO05D011052 5.9e-09 65.1 62 45.2
arahy.Tifrunner.gnm1.ann1.D08QP7 Arachis hypogaea HOM05D009250 ORTHO05D011052 1.3e-08 63.9 61 45.9
Atru.chr5.436 Acer truncatum HOM05D009250 ORTHO05D011052 1.1e-07 60.8 64 43.8
COL.COLO4_12603 Corchorus olitorius HOM05D009250 ORTHO05D011052 5.5e-07 58.5 54 51.9
Psat4g153200 Pisum sativum HOM05D020614 ORTHO05D011052 2.1e-06 56.6 132 31.1
Gohir.A02G020000 Gossypium hirsutum HOM05D009250 ORTHO05D011052 2.7e-06 56.2 48 52.1
Lj3g0026863 Lotus japonicus HOM05D020614 ORTHO05D011052 6.1e-06 55.1 72 34.7


User provided reference genes

Program Settings