Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0350211 Rosa chinensis HOM05D002350 ORTHO05D000091 2.4e-39 164.9 74 100.0
RcHm_v2.0_Chr2g0091711 Rosa chinensis HOM05D002350 ORTHO05D000091 2.9e-16 88.2 51 80.4
RcHm_v2.0_Chr4g0418181 Rosa chinensis HOM05D002350 ORTHO05D000091 4.9e-16 87.4 41 95.1
FAN23G2545 Fragaria x ananassa HOM05D002350 ORTHO05D000091 1.1e-15 86.3 52 76.9
FAN26G1444 Fragaria x ananassa HOM05D002350 ORTHO05D000091 1.4e-15 85.9 52 76.9
FAN26G3334 Fragaria x ananassa HOM05D002350 ORTHO05D000091 1.4e-15 85.9 52 76.9
FvH4_1g05980 Fragaria vesca HOM05D002350 ORTHO05D000091 7.1e-15 83.6 52 75.0
FAN19G1217 Fragaria x ananassa HOM05D002350 ORTHO05D000091 4.8e-11 70.9 43 76.7
RcHm_v2.0_Chr2g0091671 Rosa chinensis HOM05D002350 ORTHO05D000091 1.0e-08 63.2 51 56.9
MD15G1195400 Malus domestica HOM05D002350 ORTHO05D000091 1.7e-08 62.4 52 53.8
FvH4_1g05990 Fragaria vesca HOM05D002350 ORTHO05D000091 6.5e-08 60.5 52 51.9
FAN19G2534 Fragaria x ananassa HOM05D002350 ORTHO05D000091 6.5e-08 60.5 52 51.9
RcHm_v2.0_Chr5g0014401 Rosa chinensis HOM05D002350 ORTHO05D000091 1.9e-07 58.9 51 49.0
RcHm_v2.0_Chr2g0091721 Rosa chinensis HOM05D002350 ORTHO05D000091 7.1e-07 57.0 51 51.0
MD02G1064400 Malus domestica HOM05D002350 ORTHO05D000091 2.1e-06 55.5 49 49.0
GSVIVG01015313001 Vitis vinifera HOM05D002350 ORTHO05D000091 2.7e-06 55.1 49 51.0
BraA07t27873Z Brassica rapa HOM05D002350 ORTHO05D000091 3.5e-06 54.7 50 46.0
Cfa003194 Carpinus fangiana HOM05D002350 ORTHO05D000091 3.5e-06 54.7 48 47.9
BcaC06g36656 Brassica carinata HOM05D002350 ORTHO05D000091 6.0e-06 53.9 50 46.0
BolC7t40580H Brassica oleracea HOM05D002350 ORTHO05D000091 6.0e-06 53.9 50 46.0
Cfa003192 Carpinus fangiana HOM05D002350 ORTHO05D000091 6.0e-06 53.9 48 45.8
Ciclev10007331m.g Citrus clementina HOM05D002350 ORTHO05D000091 6.0e-06 53.9 50 50.0
BcaB03g16778 Brassica carinata HOM05D002350 ORTHO05D000091 7.9e-06 53.5 50 48.0


User provided reference genes

Program Settings