Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0347111 Rosa chinensis HOM05D063847 ORTHO05D045559 2.9e-108 395.2 192 100.0
FAN28G0175 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.7e-10 68.9 114 35.1
FAN28G0569 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.0e-09 65.9 114 34.2
FAN28G0938 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.0e-09 65.9 114 34.2
FvH4_5g12461 Fragaria vesca HOM05D002480 ORTHO05D003145 1.2e-08 64.3 103 36.9
FAN09G1485 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.2e-08 64.3 114 34.2
FAN11G3668 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.5e-08 63.9 114 33.3
CSS0020689 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 2.0e-08 63.5 108 33.3
FAN22G1509 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.0e-08 63.5 114 33.3
FAN25G0074 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.6e-08 63.2 114 33.3
CSS0003648 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 4.4e-08 62.4 108 34.3
FAN17G1313 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.4e-08 62.4 107 32.7
FAN18G3922 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.8e-08 62.0 114 33.3
FAN18G3832 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-07 60.8 103 35.9
QL09p045602 Quercus lobata HOM05D000003 ORTHO05D000126 1.3e-07 60.8 102 32.4
Rhsim03G0095500 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.7e-07 59.3 77 33.8
AUR62022274 Chenopodium quinoa HOM05D000003 ORTHO05D000126 4.9e-07 58.9 83 39.8
FvH4_6g10711 Fragaria vesca HOM05D008430 ORTHO05D010682 6.4e-07 58.5 112 33.0
FAN03G1539 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.4e-07 58.5 114 32.5
FAN06G4396 Fragaria x ananassa HOM05D000007 ORTHO05D000017 6.4e-07 58.5 50 60.0
FAN14G3390 Fragaria x ananassa HOM05D008430 ORTHO05D010682 8.3e-07 58.2 112 33.0
Rhsim06G0052000 Rhododendron simsii HOM05D000003 ORTHO05D000126 8.3e-07 58.2 94 29.8
COL.COLO4_29419 Corchorus olitorius HOM05D012333 ORTHO05D000126 1.1e-06 57.8 76 31.6
FvH4_2g12512 Fragaria vesca HOM05D063847 ORTHO05D045559 1.1e-06 57.8 114 36.8
FAN03G2025 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.1e-06 57.8 50 60.0
QL04p039774 Quercus lobata HOM05D000003 ORTHO05D000126 1.1e-06 57.8 179 25.1
CANSAT21G2347 Cannabis sativa HOM05D000003 ORTHO05D000126 1.4e-06 57.4 115 33.9
Dinv10706 Davidia involucrata HOM05D000003 ORTHO05D000126 1.4e-06 57.4 72 37.5
FAN06G4529 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.4e-06 57.4 50 58.0
FvH4_7g09840 Fragaria vesca HOM05D000007 ORTHO05D000017 1.9e-06 57.0 50 58.0
TWI31G0464 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 1.9e-06 57.0 109 31.2
COL.COLO4_06478 Corchorus olitorius HOM05D000003 ORTHO05D000126 3.2e-06 56.2 107 34.6
FAN10G1838 Fragaria x ananassa HOM05D008119 ORTHO05D010214 3.2e-06 56.2 84 35.7
Rhsim04G0089300 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.2e-06 56.2 94 29.8
RhsimUnG0029000 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.2e-06 56.2 94 29.8
Atru.chr1.3557 Acer truncatum HOM05D000003 ORTHO05D000126 5.4e-06 55.5 79 29.1
CSS0013263 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 5.4e-06 55.5 109 30.3
COL.COLO4_19745 Corchorus olitorius HOM05D010514 ORTHO05D000126 7.0e-06 55.1 121 24.8
Dinv03310 Davidia involucrata HOM05D000003 ORTHO05D000126 7.0e-06 55.1 74 33.8
FvH4_1g23711 Fragaria vesca HOM05D008119 ORTHO05D010214 7.0e-06 55.1 86 36.0
RhsimUnG0010100 Rhododendron simsii HOM05D000003 ORTHO05D000126 7.0e-06 55.1 70 30.0
SEGI_19865 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 9.2e-06 54.7 103 31.1
TWI23G1165 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 9.2e-06 54.7 90 31.1


User provided reference genes

Program Settings