Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0346041 Rosa chinensis HOM05D007972 ORTHO05D010352 1.7e-100 369.4 198 100.0
RcHm_v2.0_Chr1g0346011 Rosa chinensis HOM05D007972 ORTHO05D010352 7.1e-86 320.9 199 88.4
Prupe.2G122000 Prunus persica HOM05D007972 ORTHO05D010352 3.0e-60 235.7 198 68.7
MD07G1098000 Malus domestica HOM05D007972 ORTHO05D010352 1.7e-47 193.4 198 60.1
CiPaw.13G024900 Carya illinoinensis HOM05D007972 ORTHO05D010352 1.5e-43 180.3 185 57.8
QL04p029068 Quercus lobata HOM05D007972 ORTHO05D010352 9.7e-43 177.6 185 57.8
Cfa011053 Carpinus fangiana HOM05D007972 ORTHO05D010352 7.7e-40 167.9 185 54.1
TAR636G0859 Trochodendron aralioides HOM05D007972 ORTHO05D010352 2.9e-39 166.0 185 54.1
MD02G1218900 Malus domestica HOM05D007972 ORTHO05D010352 6.5e-39 164.9 200 55.5
MBI04_g13845_MAGBIO Magnolia biondii HOM05D007972 ORTHO05D010352 1.6e-37 160.2 198 52.0
Nn1g00786 Nelumbo nucifera HOM05D007972 ORTHO05D010352 8.8e-36 154.5 192 52.6
Potri.017G027900 Populus trichocarpa HOM05D007972 ORTHO05D010352 7.4e-35 151.4 194 47.9
CANSAT25G1078 Cannabis sativa HOM05D007972 ORTHO05D010352 3.7e-34 149.1 197 48.2
Sabra17G0016900 Salix brachista HOM05D007972 ORTHO05D010352 3.7e-34 149.1 179 50.8
Lalb_Chr01g0021721 Lupinus albus HOM05D007972 ORTHO05D010352 4.1e-33 145.6 196 47.4
Sabra17G0017000 Salix brachista HOM05D007972 ORTHO05D010352 2.6e-32 142.9 182 48.4
Manes.04G044100 Manihot esculenta HOM05D007972 ORTHO05D010352 4.5e-32 142.1 205 46.3
Manes.11G122500 Manihot esculenta HOM05D007972 ORTHO05D010352 4.5e-32 142.1 199 46.2
Glyma.09G244400 Glycine max HOM05D007972 ORTHO05D010352 1.0e-31 141.0 190 47.4
Medtr7g092700 Medicago truncatula HOM05D007972 ORTHO05D010352 1.7e-31 140.2 204 47.1
Oeu037442.1 Olea europaea HOM05D007972 ORTHO05D010352 1.1e-30 137.5 197 46.2
Glyma.18G249100 Glycine max HOM05D007972 ORTHO05D010352 3.2e-30 136.0 196 45.4
TWI14G1321 Tripterygium wilfordii HOM05D007972 ORTHO05D010352 7.2e-30 134.8 175 48.0
Glyma.09G244600 Glycine max HOM05D007972 ORTHO05D010352 9.4e-30 134.4 185 47.6
Ca_08498_v3 Cicer arietinum L. HOM05D007972 ORTHO05D010352 2.7e-29 132.9 203 45.8
Ca_29723_v3 Cicer arietinum L. HOM05D007972 ORTHO05D010352 2.7e-29 132.9 203 45.8
VMungo1383G2083 Vigna mungo HOM05D007972 ORTHO05D010352 6.1e-29 131.7 201 44.8
VMungo1383G2794 Vigna mungo HOM05D007972 ORTHO05D010352 2.3e-28 129.8 186 45.7
Eucgr.E01542 Eucalyptus grandis HOM05D007972 ORTHO05D010352 8.8e-28 127.9 189 43.9
Eucgr.E01544 Eucalyptus grandis HOM05D007972 ORTHO05D010352 1.1e-27 127.5 189 45.0
TPR.G4718 Trifolium pratense HOM05D007972 ORTHO05D010352 1.1e-27 127.5 195 43.1
Psat3g070000 Pisum sativum HOM05D007972 ORTHO05D010352 1.5e-27 127.1 206 46.6
Medtr7g081655 Medicago truncatula HOM05D007972 ORTHO05D010352 3.3e-27 125.9 193 43.5
Medtr7g092710 Medicago truncatula HOM05D007972 ORTHO05D010352 4.4e-27 125.6 189 43.4
Lj5g0008867 Lotus japonicus HOM05D007972 ORTHO05D010352 9.7e-27 124.4 194 44.8
Nitab4.5_0000563g0210 Nicotiana tabacum HOM05D007972 ORTHO05D010352 3.7e-26 122.5 190 43.2
TPR.G28769 Trifolium pratense HOM05D007972 ORTHO05D010352 1.4e-25 120.6 201 43.3
TWI59G1165 Tripterygium wilfordii HOM05D007972 ORTHO05D010352 1.4e-25 120.6 191 42.4
TPR.G14096 Trifolium pratense HOM05D007972 ORTHO05D010352 2.4e-25 119.8 193 43.5
Psat3g099040 Pisum sativum HOM05D007972 ORTHO05D010352 2.7e-24 116.3 170 44.7
Peaxi162Scf00853g00034 Petunia axillaris HOM05D007972 ORTHO05D010352 3.5e-24 115.9 188 41.0
Nitab4.5_0004837g0020 Nicotiana tabacum HOM05D007972 ORTHO05D010352 1.3e-23 114.0 190 41.1
Lj1g0012968 Lotus japonicus HOM05D007972 ORTHO05D010352 1.7e-23 113.6 162 48.1
Migut.B01509 Erythranthe guttata HOM05D007972 ORTHO05D010352 2.2e-23 113.2 194 41.8
AUR62041847 Chenopodium quinoa HOM05D007972 ORTHO05D010352 1.2e-21 107.5 189 39.2
AUR62032352 Chenopodium quinoa HOM05D007972 ORTHO05D010352 1.8e-20 103.6 187 36.4
CAN.G1585.6 Capsicum annuum HOM05D007972 ORTHO05D010352 3.0e-20 102.8 192 40.6
Glyma.18G248700 Glycine max HOM05D007972 ORTHO05D010352 2.0e-19 100.1 185 36.8
QL04p029065 Quercus lobata HOM05D007972 ORTHO05D010352 2.2e-18 96.7 164 42.1
Phvul.008G048700 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 3.7e-18 95.9 181 37.6
Solyc01g089890.3 Solanum lycopersicum HOM05D007972 ORTHO05D010352 4.8e-18 95.5 188 39.4
Eucgr.E01539 Eucalyptus grandis HOM05D007972 ORTHO05D010352 5.4e-17 92.0 192 39.6
PGSC0003DMG400031171 Solanum tuberosum HOM05D007972 ORTHO05D010352 2.2e-15 86.7 189 39.7
PGSC0003DMG401031172 Solanum tuberosum HOM05D007972 ORTHO05D010352 2.9e-15 86.3 191 39.3
CAN.G1585.7 Capsicum annuum HOM05D007972 ORTHO05D010352 2.7e-13 79.7 187 37.4
Sopen01g035730 Solanum pennellii HOM05D007972 ORTHO05D010352 3.6e-13 79.3 190 35.8
Sopen01g035720 Solanum pennellii HOM05D007972 ORTHO05D010352 4.7e-13 79.0 178 37.1
Solyc01g089880.3 Solanum lycopersicum HOM05D007972 ORTHO05D010352 5.2e-12 75.5 178 35.4
Eucgr.E01540 Eucalyptus grandis HOM05D007972 ORTHO05D010352 4.1e-09 65.9 107 43.9
Nn1g00784 Nelumbo nucifera HOM05D044854 ORTHO05D010352 5.4e-09 65.5 151 32.5
Phvul.008G048466 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 9.2e-09 64.7 83 48.2
HPP92_025707 Vanilla planifolia HOM05D007972 ORTHO05D010352 1.3e-07 60.8 165 30.3
Atru.chr2.836 Acer truncatum HOM05D000490 ORTHO05D000785 8.6e-07 58.2 189 30.2
ATR0665G200 Amborella trichopoda HOM05D000490 ORTHO05D000785 1.1e-06 57.8 145 29.0
Phvul.008G048532 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 1.1e-06 57.8 98 44.9
Sopen09g027770 Solanum pennellii HOM05D000490 ORTHO05D000785 1.5e-06 57.4 139 30.2
PGSC0003DMG400015078 Solanum tuberosum HOM05D000490 ORTHO05D000785 2.5e-06 56.6 139 30.9
CiPaw.03G258500 Carya illinoinensis HOM05D000490 ORTHO05D000785 3.3e-06 56.2 146 32.2
ClCG07G000640 Citrullus lanatus HOM05D000490 ORTHO05D000785 3.3e-06 56.2 140 31.4
Solyc09g066000.1 Solanum lycopersicum HOM05D000490 ORTHO05D000785 3.3e-06 56.2 139 30.2
Hma1.2p1_0817F.1_g223150 Hydrangea macrophylla HOM05D000490 ORTHO05D000785 4.3e-06 55.8 191 30.9


User provided reference genes

Program Settings