Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0340491 Rosa chinensis HOM05D014088 ORTHO05D018174 2.8e-39 166.8 319 100.0
RcHm_v2.0_Chr1g0340531 Rosa chinensis HOM05D014088 ORTHO05D013699 1.6e-34 151.0 319 74.0
RcHm_v2.0_Chr1g0340691 Rosa chinensis HOM05D002986 ORTHO05D003966 1.1e-27 128.3 150 98.7
RcHm_v2.0_Chr1g0340561 Rosa chinensis HOM05D014088 ORTHO05D018174 1.4e-27 127.9 332 57.5
RcHm_v2.0_Chr1g0340621 Rosa chinensis HOM05D014088 ORTHO05D013699 3.1e-22 110.2 326 61.3
MD02G1232100 Malus domestica HOM05D002986 ORTHO05D003966 1.8e-14 84.3 148 73.6
Prupe.2G106500 Prunus persica HOM05D002986 ORTHO05D003966 6.8e-14 82.4 151 72.8
RcHm_v2.0_Chr1g0340431 Rosa chinensis HOM05D014088 ORTHO05D018174 1.1e-11 75.1 114 61.4
Hma1.2p1_0180F.1_g079710 Hydrangea macrophylla HOM05D002986 ORTHO05D003966 1.2e-10 71.6 39 82.1
RcHm_v2.0_Chr1g0340661 Rosa chinensis HOM05D002986 ORTHO05D003966 3.5e-10 70.1 48 83.3
Atru.chr5.724 Acer truncatum HOM05D014088 ORTHO05D018174 2.3e-09 67.4 40 77.5
CSS0003779 Camellia sinensis var. sinensis HOM05D002986 ORTHO05D003966 2.3e-09 67.4 151 63.6
Manes.05G019600 Manihot esculenta HOM05D002986 ORTHO05D003966 1.5e-08 64.7 148 59.5
Sabra12G0021100 Salix brachista HOM05D002986 ORTHO05D003966 2.5e-08 63.9 149 69.8
FvH4_7g08341 Fragaria vesca HOM05D002986 ORTHO05D003966 4.3e-08 63.2 46 67.4
Cfa003765 Carpinus fangiana HOM05D002986 ORTHO05D003966 7.3e-08 62.4 151 76.8
Thecc.01G337500 Theobroma cacao HOM05D002986 ORTHO05D003966 1.2e-07 61.6 148 70.9
Duzib138G0512 Durio zibethinus HOM05D002986 ORTHO05D003966 4.7e-07 59.7 149 71.8
FAN06G3282 Fragaria x ananassa HOM05D014088 ORTHO05D018174 4.7e-07 59.7 32 84.4
Potri.012G031600 Populus trichocarpa HOM05D002986 ORTHO05D003966 4.7e-07 59.7 149 69.8
Cpa.g.c29128.3 Carica papaya HOM05D002986 ORTHO05D003966 8.1e-07 58.9 149 70.5
ECA236G1421 Erigeron canadensis HOM05D002986 ORTHO05D003966 1.8e-06 57.8 34 70.6
Gorai.001G152700 Gossypium raimondii HOM05D002986 ORTHO05D003966 3.1e-06 57.0 151 66.9
Gohir.A07G135800 Gossypium hirsutum HOM05D002986 ORTHO05D003966 4.0e-06 56.6 151 66.9
TAR636G3678 Trochodendron aralioides HOM05D002986 ORTHO05D007611 4.0e-06 56.6 150 71.3
Gohir.D07G140800 Gossypium hirsutum HOM05D002986 ORTHO05D003966 6.8e-06 55.8 145 66.9
Actinidia25367 Actinidia chinensis HOM05D002986 ORTHO05D003966 8.9e-06 55.5 149 69.8


User provided reference genes

Program Settings