Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0337761 Rosa chinensis HOM05D008495 ORTHO05D012517 7.2e-44 180.3 95 100.0
RcHm_v2.0_Chr2g0102741 Rosa chinensis HOM05D001084 ORTHO05D001275 1.2e-19 99.8 93 51.6
FvH4_1g13670 Fragaria vesca HOM05D008495 ORTHO05D012517 2.0e-17 92.4 94 50.0
FAN19G2196 Fragaria x ananassa HOM05D001084 ORTHO05D001275 2.0e-17 92.4 94 50.0
FAN26G0747 Fragaria x ananassa HOM05D001563 ORTHO05D000761 9.8e-17 90.1 91 49.5
FvH4_5g11090 Fragaria vesca HOM05D001011 ORTHO05D035356 1.3e-16 89.7 94 48.9
FvH4_5g11160 Fragaria vesca HOM05D008495 ORTHO05D035356 1.3e-16 89.7 94 48.9
FAN13G1190 Fragaria x ananassa HOM05D008495 ORTHO05D012517 1.3e-16 89.7 94 48.9
FAN18G2904 Fragaria x ananassa HOM05D008495 ORTHO05D012517 1.1e-15 86.7 94 46.8
RcHm_v2.0_Chr7g0186691 Rosa chinensis HOM05D000529 ORTHO05D012517 2.4e-15 85.5 93 46.2
FAN04G0325 Fragaria x ananassa HOM05D008495 ORTHO05D012517 3.1e-15 85.1 94 48.9
FAN08G3301 Fragaria x ananassa HOM05D000248 ORTHO05D017958 7.0e-15 84.0 94 44.7
FAN18G0250 Fragaria x ananassa HOM05D008495 ORTHO05D012517 9.1e-15 83.6 94 46.8
FAN18G3095 Fragaria x ananassa HOM05D008495 ORTHO05D012517 9.1e-15 83.6 93 44.1
FvH4_5g11100 Fragaria vesca HOM05D000248 ORTHO05D000146 4.5e-14 81.3 94 44.7
FAN18G1596 Fragaria x ananassa HOM05D000248 ORTHO05D017958 4.5e-14 81.3 94 44.7
FAN18G3118 Fragaria x ananassa HOM05D000248 ORTHO05D000146 4.5e-14 81.3 94 44.7
FAN13G0180 Fragaria x ananassa HOM05D000248 ORTHO05D000146 7.7e-14 80.5 93 43.0
FAN13G1491 Fragaria x ananassa HOM05D000248 ORTHO05D000146 7.7e-14 80.5 93 43.0
FAN13G1701 Fragaria x ananassa HOM05D000248 ORTHO05D000146 7.7e-14 80.5 93 43.0
FAN13G1884 Fragaria x ananassa HOM05D000248 ORTHO05D000146 7.7e-14 80.5 93 43.0
FAN13G2246 Fragaria x ananassa HOM05D000248 ORTHO05D000146 7.7e-14 80.5 93 43.0
FAN13G2559 Fragaria x ananassa HOM05D000248 ORTHO05D000146 7.7e-14 80.5 93 43.0
FAN13G2794 Fragaria x ananassa HOM05D000248 ORTHO05D000146 7.7e-14 80.5 93 43.0
FAN13G3019 Fragaria x ananassa HOM05D000248 ORTHO05D000146 7.7e-14 80.5 93 43.0
FAN13G3219 Fragaria x ananassa HOM05D000248 ORTHO05D000146 7.7e-14 80.5 93 43.0
FAN13G2367 Fragaria x ananassa HOM05D000248 ORTHO05D000146 1.0e-13 80.1 94 42.6
FAN08G0175 Fragaria x ananassa HOM05D030830 ORTHO05D035356 1.3e-13 79.7 89 48.3
FAN08G1641 Fragaria x ananassa HOM05D000083 ORTHO05D025348 2.9e-13 78.6 94 41.5
FvH4_5g11250 Fragaria vesca HOM05D000306 ORTHO05D025348 5.0e-13 77.8 94 41.5
FAN18G0367 Fragaria x ananassa HOM05D000083 ORTHO05D025348 6.5e-13 77.4 94 41.5
FAN18G3041 Fragaria x ananassa HOM05D000083 ORTHO05D025348 6.5e-13 77.4 94 41.5
FvH4_5g11210 Fragaria vesca HOM05D000248 ORTHO05D000146 1.9e-12 75.9 94 42.6
FAN13G2049 Fragaria x ananassa HOM05D000306 ORTHO05D025348 7.2e-12 73.9 94 39.4
FvH4_1g13660 Fragaria vesca HOM05D001084 ORTHO05D001275 2.3e-10 68.9 73 46.6
RcHm_v2.0_Chr7g0186641 Rosa chinensis HOM05D000248 ORTHO05D000146 2.6e-09 65.5 95 36.8
MD15G1278700 Malus domestica HOM05D000046 ORTHO05D025806 9.8e-09 63.5 88 40.9
FAN01G0007 Fragaria x ananassa HOM05D008495 ORTHO05D012517 2.8e-08 62.0 78 46.2
RcHm_v2.0_Chr2g0104561 Rosa chinensis HOM05D000046 ORTHO05D025806 2.8e-08 62.0 89 41.6
MD02G1022000 Malus domestica HOM05D008495 ORTHO05D025806 6.3e-08 60.8 88 37.5
MD02G1021700 Malus domestica HOM05D000041 ORTHO05D001532 1.8e-07 59.3 89 38.2
Prupe.5G127900 Prunus persica HOM05D000529 ORTHO05D012517 4.1e-07 58.2 88 37.5
MD06G1115200 Malus domestica HOM05D000081 ORTHO05D000036 5.4e-07 57.8 88 37.5
Prupe.7G138400 Prunus persica HOM05D000046 ORTHO05D025806 5.4e-07 57.8 88 38.6


User provided reference genes

Program Settings