Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0332571 Rosa chinensis HOM05D005062 ORTHO05D006410 1.4e-224 782.7 418 100.0
FvH4_7g05590 Fragaria vesca HOM05D005062 ORTHO05D006410 1.2e-186 656.8 420 86.9
FAN01G3081 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.2e-186 656.8 420 86.9
MD02G1255900 Malus domestica HOM05D005062 ORTHO05D006410 5.7e-186 654.4 418 83.0
FAN10G1073 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.3e-185 653.3 420 86.7
FAN06G1220 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.2e-175 620.2 394 87.1
FAN23G1954 Fragaria x ananassa HOM05D005062 ORTHO05D006410 4.4e-170 601.7 433 79.7
FAN23G2695 Fragaria x ananassa HOM05D005062 ORTHO05D006410 3.8e-166 588.6 457 75.1
FAN03G1004 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.5e-162 576.6 466 73.2
FAN23G1474 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.7e-161 573.2 347 90.2
CiPaw.13G040200 Carya illinoinensis HOM05D005062 ORTHO05D006410 6.4e-161 571.2 421 73.6
Cfa010314 Carpinus fangiana HOM05D005062 ORTHO05D006410 1.4e-160 570.1 421 73.4
QL04p046667 Quercus lobata HOM05D005062 ORTHO05D006410 7.8e-159 564.3 446 68.8
Atru.chr12.1008 Acer truncatum HOM05D005062 ORTHO05D006410 7.8e-151 537.7 426 70.9
Duzib106G1045 Durio zibethinus HOM05D005062 ORTHO05D006410 2.1e-148 529.6 418 70.6
Manes.10G058650 Manihot esculenta HOM05D005062 ORTHO05D006410 1.8e-147 526.6 423 69.3
PGR044G2170 Punica granatum HOM05D005062 ORTHO05D006410 3.1e-147 525.8 421 69.6
GSVIVG01011284001 Vitis vinifera HOM05D005062 ORTHO05D006410 4.4e-146 521.9 454 67.2
Cpa.g.sc183.10 Carica papaya HOM05D005062 ORTHO05D006410 1.7e-145 520.0 421 68.9
Eucgr.J00992 Eucalyptus grandis HOM05D005062 ORTHO05D006410 2.4e-144 516.2 421 69.6
Potri.008G021600 Populus trichocarpa HOM05D005062 ORTHO05D006410 4.6e-143 511.9 424 67.7
TAR623G1543 Trochodendron aralioides HOM05D005062 ORTHO05D006410 8.6e-142 507.7 420 68.6
Dinv11848 Davidia involucrata HOM05D005062 ORTHO05D006410 9.5e-141 504.2 344 78.2
CSS0021342 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 2.8e-140 502.7 429 67.4
CSS0050380 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 1.8e-139 500.0 429 66.7
Nn2g14130 Nelumbo nucifera HOM05D005062 ORTHO05D006410 1.8e-139 500.0 428 65.2
Sabra08G0014600 Salix brachista HOM05D005062 ORTHO05D006410 6.8e-139 498.0 427 66.7
Gorai.008G099000 Gossypium raimondii HOM05D005062 ORTHO05D006410 3.4e-138 495.7 423 66.7
Gohir.A12G092722 Gossypium hirsutum HOM05D005062 ORTHO05D006410 7.6e-138 494.6 420 66.7
CsaV3_2G034960 Cucumis sativus L. HOM05D005062 ORTHO05D006410 2.2e-137 493.0 408 66.9
Oeu026579.1 Olea europaea HOM05D005062 ORTHO05D006410 6.4e-137 491.5 429 64.8
DCAR_006341 Daucus carota HOM05D005062 ORTHO05D006410 2.7e-135 486.1 424 64.9
HanXRQChr08g0217771 Helianthus annuus HOM05D005062 ORTHO05D006410 7.8e-135 484.6 435 63.4
Solyc07g014740.3 Solanum lycopersicum HOM05D005062 ORTHO05D006410 1.7e-134 483.4 418 65.6
Glyma.10G111800 Glycine max HOM05D005062 ORTHO05D006410 1.9e-133 479.9 418 63.6
CAN.G54.5 Capsicum annuum HOM05D005062 ORTHO05D006410 2.5e-133 479.6 414 66.7
Ca_12731_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 5.6e-133 478.4 423 62.9
THA.LOC104824209 Tarenaya hassleriana HOM05D005062 ORTHO05D006410 5.6e-133 478.4 363 70.8
Medtr1g050462 Medicago truncatula HOM05D005062 ORTHO05D006410 2.1e-132 476.5 377 67.6
Actinidia18593 Actinidia chinensis HOM05D000444 ORTHO05D000489 2.8e-132 476.1 426 63.1
Lalb_Chr19g0129181 Lupinus albus HOM05D005062 ORTHO05D006410 3.6e-132 475.7 412 63.8
Migut.F01613 Erythranthe guttata HOM05D005062 ORTHO05D006410 8.9e-131 471.1 360 71.9
Aqoxy2G01214 Aquilegia oxysepala HOM05D005062 ORTHO05D006410 1.5e-130 470.3 417 65.5
Nitab4.5_0010225g0010 Nicotiana tabacum HOM05D005062 ORTHO05D006410 1.5e-130 470.3 423 63.6
Lj5g0026270 Lotus japonicus HOM05D005062 ORTHO05D006410 2.0e-130 469.9 427 61.6
Phvul.007G247700 Phaseolus vulgaris HOM05D005062 ORTHO05D006410 2.2e-129 466.5 415 63.4
ECA233G2289 Erigeron canadensis HOM05D005062 ORTHO05D006410 4.2e-128 462.2 409 66.5
Rhsim03G0099700 Rhododendron simsii HOM05D005062 ORTHO05D006410 4.6e-127 458.8 498 56.2
arahy.Tifrunner.gnm1.ann1.BZ57JC Arachis hypogaea HOM05D005062 ORTHO05D006410 5.1e-126 455.3 362 68.0
Peaxi162Scf00235g10011 Petunia axillaris HOM05D005062 ORTHO05D006410 5.1e-126 455.3 440 60.0
arahy.Tifrunner.gnm1.ann1.ZAGE2X Arachis hypogaea HOM05D005062 ORTHO05D006410 3.3e-125 452.6 430 60.9
AT3G56160 Arabidopsis thaliana HOM05D005062 ORTHO05D006410 9.6e-125 451.1 369 67.8
HanXRQChr11g0342201 Helianthus annuus HOM05D005062 ORTHO05D006410 1.3e-124 450.7 429 62.0
SalBow6G6867 Salvia bowleyana HOM05D005062 ORTHO05D006410 1.3e-124 450.7 344 69.8
AL5G37480 Arabidopsis lyrata HOM05D005062 ORTHO05D006410 3.6e-124 449.1 366 67.5
Cc02_g09770 Coffea canephora HOM05D005062 ORTHO05D006410 3.6e-124 449.1 327 73.4
MSTRG.8110 Avicennia marina HOM05D005062 ORTHO05D006410 8.1e-124 448.0 427 60.7
CDE06G2329 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 4.0e-123 445.7 374 64.7
Lsat_1_v5_gn_8_23960 Lactuca sativa HOM05D005062 ORTHO05D006410 2.6e-122 443.0 328 71.6
AUR62034504 Chenopodium quinoa HOM05D005062 ORTHO05D006410 4.5e-122 442.2 368 66.6
Sp5g06340 Schrenkiella parvula HOM05D005062 ORTHO05D006410 4.5e-122 442.2 361 67.9
BraA09t40366Z Brassica rapa HOM05D005062 ORTHO05D006410 7.6e-122 441.4 369 66.1
BcaC07g39930 Brassica carinata HOM05D002435 ORTHO05D002550 2.9e-121 439.5 360 67.8
A09p49130 Brassica napus HOM05D002435 ORTHO05D002550 2.9e-121 439.5 360 67.5
BolC8t50765H Brassica oleracea HOM05D002435 ORTHO05D002550 2.9e-121 439.5 360 67.8
GSVIVG01036146001 Vitis vinifera HOM05D005062 ORTHO05D006410 8.4e-121 438.0 396 61.4
Lsat_1_v5_gn_2_104621 Lactuca sativa HOM05D005062 ORTHO05D006410 1.4e-120 437.2 426 58.9
CiPaw.14G101300 Carya illinoinensis HOM05D005062 ORTHO05D006410 1.2e-119 434.1 371 62.8
ATR0081G026 Amborella trichopoda HOM05D005062 ORTHO05D006410 6.0e-119 431.8 335 67.2
BcaB01g00026 Brassica carinata HOM05D002435 ORTHO05D002550 6.0e-119 431.8 360 66.7
C08p31440 Brassica napus HOM05D002435 ORTHO05D002550 7.9e-119 431.4 361 67.3
ECA238G3155 Erigeron canadensis HOM05D005062 ORTHO05D006410 1.8e-115 420.2 389 60.7
Thhalv10006005m.g Eutrema salsugineum HOM05D005062 ORTHO05D006410 4.9e-113 412.1 396 62.9
Os02g0531200 Oryza sativa ssp. japonica HOM05D005062 ORTHO05D006410 8.4e-113 411.4 336 65.5
HanXRQChr08g0217571 Helianthus annuus HOM05D005062 ORTHO05D006410 2.1e-111 406.8 371 58.8
PGR102G2753 Punica granatum HOM05D005062 ORTHO05D006410 5.1e-110 402.1 357 60.8
Sopen07g005620 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-109 399.4 368 63.0
Prupe.2G079400 Prunus persica HOM05D005062 ORTHO05D006410 1.6e-108 397.1 258 80.6
Eucgr.B03869 Eucalyptus grandis HOM05D005062 ORTHO05D006410 6.2e-108 395.2 341 61.0
TPR.G10638 Trifolium pratense HOM05D005062 ORTHO05D006410 6.2e-108 395.2 288 73.3
HPP92_007815 Vanilla planifolia HOM05D005062 ORTHO05D006410 1.8e-107 393.7 418 56.0
Sed0016949 Sechium edule HOM05D005062 ORTHO05D006410 2.2e-105 386.7 365 63.6
Thecc.10G106400 Theobroma cacao HOM05D005062 ORTHO05D006410 2.2e-105 386.7 324 66.0
EL10As25g24233 Beta vulgaris HOM05D005062 ORTHO05D006410 3.8e-105 386.0 427 53.4
Sc12g0004460 Simmondsia chinensis HOM05D005062 ORTHO05D006410 8.4e-105 384.8 365 59.7
Ciclev10032297m.g Citrus clementina HOM05D005062 ORTHO05D006410 1.1e-96 357.8 291 69.4
Ah.08g215800 Amaranthus hybridus HOM05D005062 ORTHO05D006410 1.4e-96 357.5 355 55.5
Gohir.D12G091480 Gossypium hirsutum HOM05D005062 ORTHO05D006410 9.3e-96 354.8 325 63.1
CiPaw.14G101100 Carya illinoinensis HOM05D005062 ORTHO05D006410 1.6e-95 354.0 382 56.3
Ah.09g232820 Amaranthus hybridus HOM05D005062 ORTHO05D006410 4.6e-95 352.4 375 56.0
MD02G1256100 Malus domestica HOM05D005062 ORTHO05D006410 2.3e-94 350.1 255 73.7
Hund06778 Selenicereus undatus HOM05D005062 ORTHO05D006410 1.3e-92 344.4 376 55.1
VMungo0720G3089 Vigna mungo HOM05D000444 ORTHO05D000489 2.2e-89 333.6 436 47.9
SGA_v2.0_scaffold13G06459 Striga asiatica HOM05D005062 ORTHO05D006410 3.3e-77 293.1 464 45.3
AUR62009772 Chenopodium quinoa HOM05D005062 ORTHO05D006410 7.0e-75 285.4 430 44.9
unitig_578.g16343 Utricularia gibba HOM05D005062 ORTHO05D006410 5.9e-74 282.3 338 51.8
Zm00001eb242730 Zea mays HOM05D005062 ORTHO05D006410 1.3e-73 281.2 219 65.8
CARHR166310 Cardamine hirsuta HOM05D005062 ORTHO05D006410 1.7e-73 280.8 223 69.1
Sc20g0001180 Simmondsia chinensis HOM05D003607 ORTHO05D004049 3.6e-71 273.1 212 69.3
Lj3A928T57 Lonicera japonica HOM05D005062 ORTHO05D006410 4.7e-71 272.7 245 66.1
EL10Ac7g15813 Beta vulgaris HOM05D005062 ORTHO05D006410 3.1e-67 260.0 418 41.6
Zm00001eb296300 Zea mays HOM05D005062 ORTHO05D006410 7.0e-67 258.8 220 61.8
Carub.0005s2291 Capsella rubella HOM05D005062 ORTHO05D006410 2.5e-64 250.4 210 65.7
Haze_02484 Corylus avellana HOM05D005062 ORTHO05D006410 3.2e-64 250.0 242 62.8
Mapoly0046s0115 Marchantia polymorpha HOM05D005062 ORTHO05D006410 4.4e-61 239.6 329 43.8
AagrBONN_evm.TU.Sc2ySwM_117.1142 Anthoceros agrestis HOM05D005062 ORTHO05D006410 9.1e-59 231.9 254 52.4
AUR62039218 Chenopodium quinoa HOM05D005062 ORTHO05D006410 2.5e-56 223.8 358 41.3
SMO347G0520 Selaginella moellendorffii HOM05D005062 ORTHO05D006410 4.2e-56 223.0 325 44.9
Duzib128G0173 Durio zibethinus HOM05D005062 ORTHO05D006410 3.6e-55 219.9 235 56.6
Haze_02485 Corylus avellana HOM05D005062 ORTHO05D006410 6.8e-54 215.7 201 58.7
Haze_23392 Corylus avellana HOM05D005062 ORTHO05D006410 1.2e-53 214.9 232 54.3
Pp3c3_30210 Physcomitrium patens HOM05D005062 ORTHO05D006410 2.5e-48 197.2 187 55.6
MD02G1256200 Malus domestica HOM05D005062 ORTHO05D006410 3.3e-48 196.8 127 78.7
A02p12720 Brassica napus HOM05D005062 ORTHO05D006410 2.1e-47 194.1 231 56.3
Psat6g129720 Pisum sativum HOM05D005062 ORTHO05D006410 1.5e-45 188.0 153 68.6
Cre09.g395700 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 2.4e-43 180.6 359 37.3
CBR_g48207 Chara braunii HOM05D000019 ORTHO05D000048 3.2e-43 180.3 243 42.0
PRCOL_00003606 Prasinoderma coloniale HOM05D005062 ORTHO05D006410 2.0e-42 177.6 337 38.0
QL01p012456 Quercus lobata HOM05D005062 ORTHO05D006410 1.0e-41 175.3 129 70.5
FAN06G0036 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.3e-36 158.3 124 73.4
MCO15G192 Micromonas commoda HOM05D005062 ORTHO05D006410 2.2e-36 157.5 342 32.2
COL.COLO4_24555 Corchorus olitorius HOM05D005062 ORTHO05D006410 7.0e-35 152.5 102 78.4
Cfa010034 Carpinus fangiana HOM05D005062 ORTHO05D006410 4.6e-34 149.8 118 64.4
FAN06G3794 Fragaria x ananassa HOM05D005062 ORTHO05D006410 3.0e-33 147.1 116 75.0
Cre09.g393250 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 1.1e-32 145.2 330 34.5
Ciclev10033893m.g Citrus clementina HOM05D005062 ORTHO05D006410 1.9e-32 144.4 104 76.9
Cre02.g147450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 3.3e-32 143.7 389 32.1
FvH4_7g05870 Fragaria vesca HOM05D005062 ORTHO05D006410 7.3e-32 142.5 117 71.8
Cre12.g521950 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 2.8e-31 140.6 338 30.8
FAN01G2457 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.8e-30 137.9 82 90.2
QL01p012462 Quercus lobata HOM05D005062 ORTHO05D006410 1.5e-29 134.8 133 53.4
Cre06.g250450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 4.4e-29 133.3 360 29.4
Lj3C928T13 Lonicera japonica HOM05D005062 ORTHO05D006410 1.7e-28 131.3 165 49.7
COL.COLO4_24556 Corchorus olitorius HOM05D005062 ORTHO05D006410 1.6e-26 124.8 83 75.9
Ca_00262_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 3.9e-25 120.2 172 41.9
RcHm_v2.0_Chr1g0332551 Rosa chinensis HOM05D005062 ORTHO05D006410 6.6e-25 119.4 60 98.3
Psat6g129760 Pisum sativum HOM05D005062 ORTHO05D006410 1.1e-24 118.6 156 45.5
ClCG02G008710 Citrullus lanatus HOM05D005062 ORTHO05D006410 3.3e-24 117.1 138 50.7
GSVIVG01034679001 Vitis vinifera HOM05D005062 ORTHO05D006410 5.8e-21 106.3 68 86.8
BraA02t06329Z Brassica rapa HOM05D005062 ORTHO05D006410 1.4e-19 101.7 80 72.5
RcHm_v2.0_Chr1g0332541 Rosa chinensis HOM05D005062 ORTHO05D006410 1.6e-18 98.2 62 85.5
Haze_23393 Corylus avellana HOM05D005062 ORTHO05D006410 1.0e-17 95.5 94 56.4
Hma1.2p1_0165F.1_g073310 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 3.0e-17 94.0 66 74.2
FAN01G2288 Fragaria x ananassa HOM05D005062 ORTHO05D006410 3.9e-17 93.6 55 90.9
SEGI_26426 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 3.9e-17 93.6 105 49.5
Hma1.2p1_1068F.1_g253985 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 1.1e-16 92.0 92 57.6
Dinv42565 Davidia involucrata HOM05D005062 ORTHO05D006410 3.3e-16 90.5 113 49.6
Hund18750 Selenicereus undatus HOM05D005062 ORTHO05D006410 4.0e-14 83.6 102 46.1
SEGI_01082 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 4.4e-13 80.1 59 71.2
Ca_12794_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 2.3e-09 67.8 54 66.7
MELO3C034937.2 Cucumis melo HOM05D005062 ORTHO05D006410 1.1e-08 65.5 77 50.6
SEGI_13629 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 1.1e-08 65.5 57 57.9
CDE08G0076 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 7.3e-08 62.8 35 82.9
Cre02.g095086 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D028578 1.6e-07 61.6 236 25.8
MCO11G881 Micromonas commoda HOM05D005062 ORTHO05D028578 2.1e-07 61.2 415 26.0
Cre02.g095085 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D028578 1.1e-06 58.9 221 24.9


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