Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0332021 Rosa chinensis HOM05D009706 ORTHO05D009452 1.5e-142 509.6 275 100.0
RcHm_v2.0_Chr3g0468771 Rosa chinensis HOM05D009706 ORTHO05D009452 1.3e-98 363.6 218 93.6
RcHm_v2.0_Chr4g0435991 Rosa chinensis HOM05D009706 ORTHO05D009452 1.3e-98 363.6 218 93.6
FAN05G2530 Fragaria x ananassa HOM05D009706 ORTHO05D009452 2.1e-64 250.0 202 62.9
FAN02G2771 Fragaria x ananassa HOM05D009706 ORTHO05D009452 3.6e-64 249.2 202 62.4
FAN05G5299 Fragaria x ananassa HOM05D009706 ORTHO05D009452 3.1e-63 246.1 202 61.9
FvH4_3g32800 Fragaria vesca HOM05D009706 ORTHO05D009452 2.3e-58 229.9 180 63.9
FAN05G1126 Fragaria x ananassa HOM05D009706 ORTHO05D009452 2.9e-53 213.0 202 56.9
FAN05G0389 Fragaria x ananassa HOM05D009706 ORTHO05D009452 5.5e-44 182.2 158 60.8
FAN27G0213 Fragaria x ananassa HOM05D009706 ORTHO05D009452 6.0e-43 178.7 109 78.0
RcHm_v2.0_Chr6g0251691 Rosa chinensis HOM05D009706 ORTHO05D009452 1.0e-42 177.9 99 88.9
RcHm_v2.0_Chr7g0237841 Rosa chinensis HOM05D009706 ORTHO05D009452 9.7e-33 144.8 187 43.3
FAN24G1773 Fragaria x ananassa HOM05D009706 ORTHO05D009452 2.8e-32 143.3 110 62.7
FAN09G3904 Fragaria x ananassa HOM05D009706 ORTHO05D009452 2.3e-26 123.6 157 42.0
FAN02G4614 Fragaria x ananassa HOM05D009706 ORTHO05D009452 5.1e-26 122.5 155 49.0
FAN26G2611 Fragaria x ananassa HOM05D009706 ORTHO05D009452 2.2e-21 107.1 70 71.4
FvH4_6g23430 Fragaria vesca HOM05D009706 ORTHO05D009452 3.6e-19 99.8 77 63.6
FAN14G5856 Fragaria x ananassa HOM05D009706 ORTHO05D009452 3.6e-19 99.8 77 63.6
FAN17G2902 Fragaria x ananassa HOM05D009706 ORTHO05D009452 1.5e-17 94.4 59 74.6
FAN13G1474 Fragaria x ananassa HOM05D009706 ORTHO05D009452 4.4e-17 92.8 128 40.6
FAN03G2326 Fragaria x ananassa HOM05D009706 ORTHO05D009452 1.3e-13 81.3 204 29.4
FAN18G3193 Fragaria x ananassa HOM05D009706 ORTHO05D009452 2.5e-12 77.0 113 38.1
RcHm_v2.0_Chr4g0393741 Rosa chinensis HOM05D008315 ORTHO05D009452 4.0e-10 69.7 163 33.1
FAN08G2751 Fragaria x ananassa HOM05D008315 ORTHO05D009452 8.8e-10 68.6 143 32.2
FAN25G1520 Fragaria x ananassa HOM05D008315 ORTHO05D009452 8.8e-10 68.6 121 32.2
FAN14G0707 Fragaria x ananassa HOM05D008315 ORTHO05D009452 7.5e-09 65.5 114 33.3
RcHm_v2.0_Chr4g0397391 Rosa chinensis HOM05D008315 ORTHO05D009452 2.2e-08 63.9 152 31.6
RcHm_v2.0_Chr2g0136581 Rosa chinensis HOM05D008315 ORTHO05D009452 2.8e-08 63.5 158 28.5
RcHm_v2.0_Chr2g0145131 Rosa chinensis HOM05D008315 ORTHO05D009452 2.8e-08 63.5 111 36.9
FAN10G3967 Fragaria x ananassa HOM05D008315 ORTHO05D009452 1.4e-07 61.2 164 29.9
FAN14G2954 Fragaria x ananassa HOM05D008315 ORTHO05D009452 1.4e-07 61.2 152 30.3
FvH4_2g21543 Fragaria vesca HOM05D008315 ORTHO05D009452 9.1e-07 58.5 118 39.0
FAN13G2460 Fragaria x ananassa HOM05D000534 ORTHO05D000389 9.1e-07 58.5 108 37.0
FAN02G4463 Fragaria x ananassa HOM05D058267 ORTHO05D045636 1.6e-06 57.8 37 67.6
MD03G1101500 Malus domestica HOM05D008315 ORTHO05D009452 1.6e-06 57.8 52 48.1
RcHm_v2.0_Chr2g0143311 Rosa chinensis HOM05D012440 ORTHO05D009452 2.0e-06 57.4 116 31.0
FAN08G1914 Fragaria x ananassa HOM05D008315 ORTHO05D009452 3.5e-06 56.6 152 29.6
FAN08G3171 Fragaria x ananassa HOM05D008315 ORTHO05D009452 5.9e-06 55.8 153 30.1
FAN22G0699 Fragaria x ananassa HOM05D001458 ORTHO05D035488 7.7e-06 55.5 35 71.4


User provided reference genes

Program Settings