Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0331021 Rosa chinensis HOM05D003398 ORTHO05D003867 3.1e-49 198.0 88 100.0
RcHm_v2.0_Chr7g0238211 Rosa chinensis HOM05D003398 ORTHO05D003867 1.8e-17 92.4 46 84.8
RcHm_v2.0_Chr6g0276241 Rosa chinensis HOM05D003398 ORTHO05D003867 4.1e-17 91.3 46 84.8
RcHm_v2.0_Chr7g0188211 Rosa chinensis HOM05D003398 ORTHO05D003867 1.2e-16 89.7 46 80.4
RcHm_v2.0_Chr1g0335951 Rosa chinensis HOM05D003398 ORTHO05D003867 4.5e-16 87.8 39 94.9
RcHm_v2.0_Chr1g0338001 Rosa chinensis HOM05D003398 ORTHO05D003867 4.5e-16 87.8 39 94.9
RcHm_v2.0_Chr7g0217921 Rosa chinensis HOM05D003398 ORTHO05D003867 3.8e-15 84.7 46 80.4
RcHm_v2.0_Chr2g0173661 Rosa chinensis HOM05D003398 ORTHO05D003867 4.3e-11 71.2 47 72.3
MELO3C021605.2 Cucumis melo HOM05D003398 ORTHO05D003867 1.3e-07 59.7 47 59.6
CsaV3_5G026890 Cucumis sativus L. HOM05D003398 ORTHO05D003867 1.3e-07 59.7 47 59.6
FvH4_2g09970 Fragaria vesca HOM05D003398 ORTHO05D003867 1.3e-07 59.7 47 55.3
FAN20G3040 Fragaria x ananassa HOM05D003398 ORTHO05D003867 1.3e-07 59.7 47 55.3
FAN24G2305 Fragaria x ananassa HOM05D003398 ORTHO05D003867 1.3e-07 59.7 47 55.3
FAN27G1215 Fragaria x ananassa HOM05D003398 ORTHO05D003867 1.3e-07 59.7 47 55.3
EL10Ac4g09990 Beta vulgaris HOM05D003398 ORTHO05D003867 1.7e-07 59.3 48 54.2
Prupe.3G296400 Prunus persica HOM05D003398 ORTHO05D003867 2.9e-07 58.5 47 57.4
Atru.chr11.509 Acer truncatum HOM05D003398 ORTHO05D003867 6.5e-07 57.4 46 56.5
AUR62034120 Chenopodium quinoa HOM05D003398 ORTHO05D003867 8.5e-07 57.0 44 59.1
FAN15G2381 Fragaria x ananassa HOM05D003398 ORTHO05D003867 1.1e-06 56.6 47 53.2
Sc18g0003950 Simmondsia chinensis HOM05D003398 ORTHO05D003867 1.4e-06 56.2 45 57.8
Atru.chr1.3014 Acer truncatum HOM05D003398 ORTHO05D003867 1.9e-06 55.8 47 55.3
vmacro05894 Vaccinium macrocarpon HOM05D003398 ORTHO05D003867 1.9e-06 55.8 70 41.4
Atru.chr6.2457 Acer truncatum HOM05D003398 ORTHO05D003867 2.5e-06 55.5 47 55.3
Oeu054646.1 Olea europaea HOM05D003398 ORTHO05D003867 2.5e-06 55.5 47 55.3
Atru.chr12.1129 Acer truncatum HOM05D003398 ORTHO05D003867 3.2e-06 55.1 47 55.3
Sed0013516 Sechium edule HOM05D003398 ORTHO05D003867 3.2e-06 55.1 47 55.3
PGSC0003DMG400011703 Solanum tuberosum HOM05D003398 ORTHO05D003867 3.2e-06 55.1 47 53.2
CANSAT21G2202 Cannabis sativa HOM05D003398 ORTHO05D003867 4.2e-06 54.7 47 57.4
ClCG00G004890 Citrullus lanatus HOM05D003398 ORTHO05D003867 4.2e-06 54.7 47 55.3
ClCG09G019490 Citrullus lanatus HOM05D003398 ORTHO05D003867 4.2e-06 54.7 47 55.3
Cc07_g00160 Coffea canephora HOM05D003398 ORTHO05D003867 4.2e-06 54.7 47 53.2
Dinv33404 Davidia involucrata HOM05D003398 ORTHO05D003867 5.5e-06 54.3 47 53.2
Rhsim08G0047400 Rhododendron simsii HOM05D003398 ORTHO05D003867 5.5e-06 54.3 47 53.2
Potri.001G339900 Populus trichocarpa HOM05D003398 ORTHO05D003867 7.2e-06 53.9 47 51.1
Lj2g0003632 Lotus japonicus HOM05D003398 ORTHO05D003867 9.4e-06 53.5 42 59.5
Manes.15G154000 Manihot esculenta HOM05D003398 ORTHO05D003867 9.4e-06 53.5 47 51.1
Sabra17G0099900 Salix brachista HOM05D003398 ORTHO05D003867 9.4e-06 53.5 47 48.9
Sabra17G0103200 Salix brachista HOM05D003398 ORTHO05D003867 9.4e-06 53.5 47 48.9


User provided reference genes

Program Settings