Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0330581 Rosa chinensis HOM05D000874 ORTHO05D001267 0.0e+00 1165.2 638 100.0
RcHm_v2.0_Chr7g0183271 Rosa chinensis HOM05D000874 ORTHO05D001049 4.9e-104 382.9 381 64.0
FAN08G0155 Fragaria x ananassa HOM05D000874 ORTHO05D001267 1.8e-77 294.7 310 60.6
FAN13G1125 Fragaria x ananassa HOM05D000874 ORTHO05D001049 3.7e-75 287.0 310 59.7
FvH4_5g13671 Fragaria vesca HOM05D000874 ORTHO05D001049 8.4e-72 275.8 310 61.3
FAN18G0264 Fragaria x ananassa HOM05D000874 ORTHO05D001267 1.2e-70 271.9 310 60.6
RcHm_v2.0_Chr7g0183291 Rosa chinensis HOM05D000874 ORTHO05D001267 1.1e-44 185.7 220 53.2
Prupe.5G206700 Prunus persica HOM05D000874 ORTHO05D001267 1.7e-35 155.2 248 45.2
Prupe.5G206600 Prunus persica HOM05D000874 ORTHO05D001049 2.0e-25 121.7 394 31.5
FvH4_5g13670 Fragaria vesca HOM05D000874 ORTHO05D001267 1.9e-23 115.2 93 65.6
RcHm_v2.0_Chr7g0183261 Rosa chinensis HOM05D000874 ORTHO05D001049 1.4e-21 109.0 197 40.1
MD06G1203100 Malus domestica HOM05D000874 ORTHO05D001049 1.2e-14 85.9 213 37.6
RcHm_v2.0_Chr1g0330571 Rosa chinensis HOM05D000874 ORTHO05D001049 8.3e-11 73.2 72 58.3
Manes.06G083000 Manihot esculenta HOM05D000874 ORTHO05D001267 2.9e-08 64.7 187 34.8
MD14G1213700 Malus domestica HOM05D000874 ORTHO05D001049 1.5e-07 62.4 235 28.9
CiPaw.11G055400 Carya illinoinensis HOM05D000874 ORTHO05D001267 1.2e-06 59.3 261 30.3


User provided reference genes

Program Settings