Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0329491 Rosa chinensis HOM05D000966 ORTHO05D007323 6.0e-141 504.2 263 100.0
FAN03G0153 Fragaria x ananassa HOM05D000966 ORTHO05D007323 1.6e-125 453.0 261 90.8
FAN01G0621 Fragaria x ananassa HOM05D000966 ORTHO05D007323 2.7e-125 452.2 261 90.4
Prupe.8G038500 Prunus persica HOM05D000966 ORTHO05D007323 1.0e-100 370.5 257 79.0
MD05G1031500 Malus domestica HOM05D000966 ORTHO05D007323 5.9e-96 354.8 248 77.4
Potri.005G195400 Populus trichocarpa HOM05D000966 ORTHO05D007323 3.3e-83 312.4 263 62.7
Sabra05G0148900 Salix brachista HOM05D000966 ORTHO05D007323 1.1e-81 307.4 266 61.3
Cfa018294 Carpinus fangiana HOM05D000966 ORTHO05D007323 7.0e-81 304.7 262 64.5
QL02p038471 Quercus lobata HOM05D000966 ORTHO05D007323 9.1e-81 304.3 265 64.5
CiPaw.15G013800 Carya illinoinensis HOM05D000966 ORTHO05D007323 1.7e-79 300.1 266 62.4
TAR381G1161 Trochodendron aralioides HOM05D000966 ORTHO05D007323 7.2e-78 294.7 269 61.3
Cpa.g.sc49.86 Carica papaya HOM05D000966 ORTHO05D007323 3.0e-76 289.3 264 61.7
TWI34G1291 Tripterygium wilfordii HOM05D000966 ORTHO05D007323 4.0e-76 288.9 258 63.2
Atru.chr13.2052 Acer truncatum HOM05D000966 ORTHO05D007323 8.8e-76 287.7 263 62.4
Ciclev10000952m.g Citrus clementina HOM05D000966 ORTHO05D007323 3.4e-75 285.8 253 63.6
Gohir.A06G111200 Gossypium hirsutum HOM05D000966 ORTHO05D007323 5.7e-75 285.0 267 59.2
Gorai.010G131600 Gossypium raimondii HOM05D000966 ORTHO05D007323 5.7e-75 285.0 266 59.4
Gohir.D06G115100 Gossypium hirsutum HOM05D000966 ORTHO05D007323 9.8e-75 284.3 266 59.0
Manes.12G141700 Manihot esculenta HOM05D000966 ORTHO05D007323 9.8e-75 284.3 264 60.6
Thecc.08G157600 Theobroma cacao HOM05D000966 ORTHO05D007323 1.6e-72 276.9 264 59.5
Duzib116G0132 Durio zibethinus HOM05D000966 ORTHO05D007323 2.0e-72 276.6 264 58.3
Lalb_Chr02g0141501 Lupinus albus HOM05D000966 ORTHO05D007323 3.0e-68 262.7 267 59.2
Ca_10671_v3 Cicer arietinum L. HOM05D000966 ORTHO05D007323 4.0e-68 262.3 261 59.4
MELO3C008329.2 Cucumis melo HOM05D000966 ORTHO05D007323 1.5e-67 260.4 269 54.6
CANSAT25G2301 Cannabis sativa HOM05D000966 ORTHO05D007323 7.5e-67 258.1 261 55.2
Sed0009464 Sechium edule HOM05D000966 ORTHO05D007323 7.5e-67 258.1 268 54.1
VMungo0720G0673 Vigna mungo HOM05D000966 ORTHO05D007323 1.7e-66 256.9 258 58.5
Phvul.007G082400 Phaseolus vulgaris HOM05D000966 ORTHO05D007323 2.2e-66 256.5 258 58.1
arahy.Tifrunner.gnm1.ann1.Z2GQ5K Arachis hypogaea HOM05D000966 ORTHO05D007323 1.4e-65 253.8 261 57.9
Haze_17793 Corylus avellana HOM05D000966 ORTHO05D007323 2.4e-65 253.1 363 46.3
CsaV3_6G005070 Cucumis sativus L. HOM05D000966 ORTHO05D007323 2.4e-65 253.1 269 53.2
Psat6g191160 Pisum sativum HOM05D000966 ORTHO05D007323 3.1e-65 252.7 261 58.6
arahy.Tifrunner.gnm1.ann1.83HUSC Arachis hypogaea HOM05D000966 ORTHO05D007323 4.1e-65 252.3 261 57.9
ClCG08G008820 Citrullus lanatus HOM05D000966 ORTHO05D007323 4.1e-65 252.3 269 53.9
Lj5g0028132 Lotus japonicus HOM05D000966 ORTHO05D007323 1.0e-63 247.7 262 56.1
Glyma.20G168900 Glycine max HOM05D000966 ORTHO05D007323 5.0e-63 245.4 258 57.0
Glyma.10G222800 Glycine max HOM05D000966 ORTHO05D007323 6.6e-63 245.0 258 57.0
Hma1.2p1_0081F.1_g042500 Hydrangea macrophylla HOM05D000966 ORTHO05D007323 1.9e-62 243.4 265 51.7
Dinv25888 Davidia involucrata HOM05D000044 ORTHO05D002853 5.6e-62 241.9 250 55.2
Nn3g18699 Nelumbo nucifera HOM05D000966 ORTHO05D007323 4.7e-61 238.8 259 54.4
PSO170G0768 Papaver somniferum HOM05D000966 ORTHO05D007323 4.7e-61 238.8 274 53.6
Sc20g0003630 Simmondsia chinensis HOM05D000966 ORTHO05D007323 4.7e-61 238.8 257 54.1
PGR042G2706 Punica granatum HOM05D000966 ORTHO05D007323 4.0e-60 235.7 247 55.5
Medtr1g098000 Medicago truncatula HOM05D000966 ORTHO05D007323 6.8e-60 235.0 258 56.6
PSO700G0340 Papaver somniferum HOM05D000966 ORTHO05D007323 6.8e-60 235.0 274 53.3
Eucgr.F02689 Eucalyptus grandis HOM05D000966 ORTHO05D007323 1.5e-59 233.8 255 56.5
Medtr1g098370 Medicago truncatula HOM05D000966 ORTHO05D007323 9.8e-59 231.1 258 55.8
AL2G36860 Arabidopsis lyrata HOM05D000966 ORTHO05D007323 2.2e-58 229.9 259 53.3
TPR.G17050 Trifolium pratense HOM05D000966 ORTHO05D007323 3.7e-58 229.2 262 55.3
Carub.0002s2362 Capsella rubella HOM05D000966 ORTHO05D007323 1.1e-57 227.6 261 53.3
Sp5g31860 Schrenkiella parvula HOM05D000966 ORTHO05D007323 3.2e-57 226.1 257 52.5
THA.LOC104812030 Tarenaya hassleriana HOM05D000966 ORTHO05D007323 1.2e-56 224.2 245 53.9
Aa31LG4G6790 Aethionema arabicum HOM05D000966 ORTHO05D007323 3.9e-55 219.2 255 52.9
Thhalv10018466m.g Eutrema salsugineum HOM05D000966 ORTHO05D007323 3.9e-55 219.2 259 54.4
AT1G76710 Arabidopsis thaliana HOM05D000966 ORTHO05D007323 2.5e-54 216.5 264 52.3
ATR0584G286 Amborella trichopoda HOM05D000966 ORTHO05D007323 9.5e-54 214.5 261 47.9
BcaC08g47180 Brassica carinata HOM05D001345 ORTHO05D001190 2.1e-53 213.4 250 54.0
Aqoxy4G02511 Aquilegia oxysepala HOM05D000966 ORTHO05D007323 8.0e-53 211.5 269 48.7
GSVIVG01034572001 Vitis vinifera HOM05D000966 ORTHO05D007323 3.1e-52 209.5 256 48.0
Hund26681 Selenicereus undatus HOM05D000966 ORTHO05D007323 1.6e-48 197.2 263 46.4
MD10G1033100 Malus domestica HOM05D000966 ORTHO05D007323 2.7e-48 196.4 134 75.4
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 2.7e-48 196.4 257 44.7
AUR62026672 Chenopodium quinoa HOM05D000966 ORTHO05D007323 1.7e-47 193.7 258 47.7
AUR62040579 Chenopodium quinoa HOM05D000966 ORTHO05D007323 6.6e-47 191.8 258 46.9
Ah.02g124940 Amaranthus hybridus HOM05D000966 ORTHO05D007323 1.9e-46 190.3 258 45.0
CARHR070260 Cardamine hirsuta HOM05D000966 ORTHO05D007323 1.9e-46 190.3 261 46.7
MSTRG.22010 Avicennia marina HOM05D000966 ORTHO05D007323 3.1e-44 183.0 262 44.7
CDE12G0409 Ceratophyllum demersum HOM05D000966 ORTHO05D007323 5.8e-43 178.7 267 44.2
SalBow6G0098 Salvia bowleyana HOM05D000966 ORTHO05D007323 5.8e-43 178.7 259 44.0
A07p42380 Brassica napus HOM05D000966 ORTHO05D007323 1.7e-42 177.2 260 45.4
BcaC08g47221 Brassica carinata HOM05D000966 ORTHO05D007323 1.4e-41 174.1 249 45.4
Migut.N03097 Erythranthe guttata HOM05D000966 ORTHO05D007323 4.1e-41 172.6 277 41.9
Peaxi162Scf01038g00145 Petunia axillaris HOM05D000966 ORTHO05D007323 1.2e-40 171.0 237 45.1
Nitab4.5_0000949g0070 Nicotiana tabacum HOM05D000966 ORTHO05D007323 2.1e-40 170.2 241 44.4
BolC6t40119H Brassica oleracea HOM05D000966 ORTHO05D007323 6.0e-40 168.7 258 43.8
Nitab4.5_0000617g0300 Nicotiana tabacum HOM05D000966 ORTHO05D007323 7.8e-40 168.3 239 43.9
BraA07t31764Z Brassica rapa HOM05D000966 ORTHO05D007323 1.3e-39 167.5 277 43.0
Peaxi162Scf00088g00919 Petunia axillaris HOM05D000966 ORTHO05D007323 6.6e-39 165.2 252 41.3
Oeu020493.1 Olea europaea HOM05D000966 ORTHO05D007323 1.1e-38 164.5 268 42.2
DCAR_001155 Daucus carota HOM05D000966 ORTHO05D007323 2.1e-37 160.2 256 39.8
C06p50930 Brassica napus HOM05D000966 ORTHO05D007323 6.2e-37 158.7 278 40.6
Cc03_g11990 Coffea canephora HOM05D000966 ORTHO05D007323 8.9e-36 154.8 251 38.2
MD10G1033000 Malus domestica HOM05D000966 ORTHO05D007323 7.6e-35 151.8 96 83.3
ECA233G6088 Erigeron canadensis HOM05D000966 ORTHO05D007323 1.3e-34 151.0 267 40.4
EL10Ac1g01592 Beta vulgaris HOM05D000966 ORTHO05D007323 4.9e-34 149.1 147 54.4
Lj4C702T3 Lonicera japonica HOM05D000966 ORTHO05D007323 4.1e-33 146.0 247 42.9
COL.COLO4_13799 Corchorus olitorius HOM05D000966 ORTHO05D007323 1.2e-32 144.4 243 42.8
Os04g0429100 Oryza sativa ssp. japonica HOM05D000966 ORTHO05D007323 7.8e-32 141.7 279 34.8
unitig_18.g30053 Utricularia gibba HOM05D000966 ORTHO05D007323 3.9e-31 139.4 229 40.2
unitig_8.g4809 Utricularia gibba HOM05D000966 ORTHO05D007323 3.9e-31 139.4 229 40.2
Zm00001eb082920 Zea mays HOM05D000966 ORTHO05D007323 8.7e-31 138.3 282 34.8
HanXRQChr08g0226091 Helianthus annuus HOM05D000966 ORTHO05D007323 5.6e-30 135.6 239 39.3
Oeu056130.2 Olea europaea HOM05D000966 ORTHO05D007323 2.1e-29 133.7 249 34.1
A07p42370 Brassica napus HOM05D000966 ORTHO05D007323 3.6e-29 132.9 115 59.1
CAN.G555.11 Capsicum annuum HOM05D000966 ORTHO05D007323 4.7e-29 132.5 234 36.8
Sopen07g004390 Solanum pennellii HOM05D000966 ORTHO05D007323 1.8e-28 130.6 245 35.9
Solyc07g008460.3 Solanum lycopersicum HOM05D000966 ORTHO05D007323 3.1e-28 129.8 245 35.9
Medtr1g098030 Medicago truncatula HOM05D000966 ORTHO05D007323 6.9e-28 128.6 210 46.7
Actinidia17776 Actinidia chinensis HOM05D000966 ORTHO05D007323 9.0e-28 128.3 250 36.0
PGSC0003DMG400010972 Solanum tuberosum HOM05D000966 ORTHO05D007323 9.0e-28 128.3 242 36.0
Cc00_g32880 Coffea canephora HOM05D000966 ORTHO05D007323 2.6e-27 126.7 243 34.2
Lsat_1_v5_gn_8_521 Lactuca sativa HOM05D000966 ORTHO05D007323 7.1e-25 118.6 236 35.6
SEGI_26212 Sequoiadendron giganteum HOM05D000966 ORTHO05D007323 6.6e-23 112.1 277 32.5
GSVIVG01034571001 Vitis vinifera HOM05D000966 ORTHO05D007323 8.7e-23 111.7 126 46.0
HPP92_009293 Vanilla planifolia HOM05D000966 ORTHO05D007323 2.5e-22 110.2 111 49.5
Rhsim06G0128000 Rhododendron simsii HOM05D000966 ORTHO05D007323 1.3e-18 97.8 259 32.0
CSS0040268 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D007323 2.7e-16 90.1 124 48.4
Cc03_g12000 Coffea canephora HOM05D000966 ORTHO05D007323 3.3e-14 83.2 191 30.9
A07p42360 Brassica napus HOM05D001345 ORTHO05D001190 8.7e-07 58.5 46 65.2
ECA234G4770 Erigeron canadensis HOM05D000966 ORTHO05D007323 4.3e-06 56.2 49 57.1


User provided reference genes

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