Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0328921 Rosa chinensis HOM05D003003 ORTHO05D008343 1.3e-41 172.6 80 100.0
RcHm_v2.0_Chr3g0460061 Rosa chinensis HOM05D003003 ORTHO05D008343 3.9e-19 97.8 52 88.5
RcHm_v2.0_Chr5g0055391 Rosa chinensis HOM05D003003 ORTHO05D008343 2.0e-18 95.5 50 90.0
FAN09G1188 Fragaria x ananassa HOM05D003003 ORTHO05D008343 2.2e-17 92.0 57 80.7
FAN05G1701 Fragaria x ananassa HOM05D003003 ORTHO05D008343 8.2e-17 90.1 57 78.9
FvH4_6g09480 Fragaria vesca HOM05D003003 ORTHO05D008343 1.1e-16 89.7 57 78.9
FAN02G2939 Fragaria x ananassa HOM05D003003 ORTHO05D008343 1.8e-16 89.0 57 78.9
FAN14G2421 Fragaria x ananassa HOM05D003003 ORTHO05D008343 1.8e-16 89.0 57 78.9
Prupe.6G296900 Prunus persica HOM05D003003 ORTHO05D008343 1.1e-13 79.7 49 71.4
MD12G1192400 Malus domestica HOM05D003003 ORTHO05D008343 2.6e-10 68.6 49 65.3
Hma1.2p1_0174F.1_g076680 Hydrangea macrophylla HOM05D003003 ORTHO05D008343 2.8e-09 65.1 49 61.2
Hma1.2p1_0174F.1_g076690 Hydrangea macrophylla HOM05D003003 ORTHO05D008343 2.8e-09 65.1 49 61.2
Duzib151G0009 Durio zibethinus HOM05D003003 ORTHO05D008343 4.8e-09 64.3 49 59.2
QL07p031603 Quercus lobata HOM05D003003 ORTHO05D008343 1.2e-07 59.7 51 60.8
Atru.chr8.74 Acer truncatum HOM05D003003 ORTHO05D008343 3.5e-07 58.2 50 52.0
QL07p031297 Quercus lobata HOM05D003003 ORTHO05D008343 5.9e-07 57.4 51 58.8
Ciclev10012371m.g Citrus clementina HOM05D003003 ORTHO05D008343 1.0e-06 56.6 52 53.8
Dinv16947 Davidia involucrata HOM05D003003 ORTHO05D008343 1.3e-06 56.2 57 52.6
MD04G1177200 Malus domestica HOM05D003003 ORTHO05D008343 2.9e-06 55.1 49 53.1
CiPaw.09G223200 Carya illinoinensis HOM05D003003 ORTHO05D008343 8.5e-06 53.5 38 63.2
Haze_21204 Corylus avellana HOM05D003003 ORTHO05D008343 8.5e-06 53.5 49 51.0


User provided reference genes

Program Settings