Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0325871 Rosa chinensis HOM05D005138 ORTHO05D006318 2.1e-70 268.9 133 100.0
FAN03G2670 Fragaria x ananassa HOM05D005138 ORTHO05D006318 4.0e-69 264.6 133 97.7
FAN06G4838 Fragaria x ananassa HOM05D005138 ORTHO05D006318 4.0e-69 264.6 133 97.7
FvH4_7g03540 Fragaria vesca HOM05D005138 ORTHO05D006318 2.6e-68 261.9 133 97.0
FAN10G0593 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.3e-67 259.6 133 96.2
FAN10G2449 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.3e-67 259.6 133 96.2
MD07G1047200 Malus domestica HOM05D005138 ORTHO05D006318 6.3e-62 240.7 133 88.0
Prupe.2G041500 Prunus persica HOM05D005138 ORTHO05D006318 8.2e-62 240.4 133 87.2
MD02G1279300 Malus domestica HOM05D005138 ORTHO05D006318 2.6e-60 235.3 133 84.2
Hma1.2p1_0837F.1_g226140 Hydrangea macrophylla HOM05D005138 ORTHO05D006318 6.1e-57 224.2 133 79.7
Haze_03004 Corylus avellana HOM05D005138 ORTHO05D006318 7.9e-57 223.8 131 81.7
Eucgr.G03216 Eucalyptus grandis HOM05D005138 ORTHO05D006318 1.0e-56 223.4 133 81.2
PGR044G2178 Punica granatum HOM05D005138 ORTHO05D006318 2.3e-56 222.2 133 79.7
Cfa010943 Carpinus fangiana HOM05D005138 ORTHO05D006318 6.7e-56 220.7 131 80.2
CiPaw.14G008900 Carya illinoinensis HOM05D005138 ORTHO05D006318 6.7e-56 220.7 133 78.2
Manes.11G007200 Manihot esculenta HOM05D005138 ORTHO05D006318 7.4e-55 217.2 133 78.2
Manes.04G157100 Manihot esculenta HOM05D005138 ORTHO05D006318 1.7e-54 216.1 133 78.2
Dinv44706 Davidia involucrata HOM05D005138 ORTHO05D006318 2.2e-54 215.7 131 77.9
Thecc.10G149000 Theobroma cacao HOM05D005138 ORTHO05D006318 2.2e-54 215.7 133 78.2
Sed0002262 Sechium edule HOM05D005138 ORTHO05D006318 3.7e-54 214.9 133 75.9
CiPaw.13G015300 Carya illinoinensis HOM05D005138 ORTHO05D006318 6.3e-54 214.2 131 77.9
Gohir.D10G195900 Gossypium hirsutum HOM05D005138 ORTHO05D006318 6.3e-54 214.2 133 76.7
vmacro10390 Vaccinium macrocarpon HOM05D005138 ORTHO05D006318 8.2e-54 213.8 133 75.9
Duzib128G1035 Durio zibethinus HOM05D005138 ORTHO05D006318 1.1e-53 213.4 133 75.9
Cpa.g.sc169.49 Carica papaya HOM05D005138 ORTHO05D006318 1.4e-53 213.0 133 78.2
Gorai.011G218700 Gossypium raimondii HOM05D005138 ORTHO05D006318 1.4e-53 213.0 133 75.9
TAR362G0697 Trochodendron aralioides HOM05D005138 ORTHO05D006318 1.4e-53 213.0 133 75.2
Duzib114G0920 Durio zibethinus HOM05D005138 ORTHO05D006318 1.8e-53 212.6 133 75.2
Gohir.A10G188000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 3.1e-53 211.8 133 75.2
Zm00001eb001400 Zea mays HOM05D005138 ORTHO05D006318 4.1e-53 211.5 133 74.4
HanXRQChr11g0341771 Helianthus annuus HOM05D005138 ORTHO05D006318 6.9e-53 210.7 133 75.9
Atru.chr12.1279 Acer truncatum HOM05D005138 ORTHO05D006318 9.1e-53 210.3 133 74.4
MELO3C012486.2 Cucumis melo HOM05D005138 ORTHO05D006318 1.5e-52 209.5 141 72.3
DCAR_029715 Daucus carota HOM05D005138 ORTHO05D006318 1.5e-52 209.5 133 74.4
PSO384G1335 Papaver somniferum HOM05D005138 ORTHO05D006318 1.5e-52 209.5 133 75.2
Ciclev10002826m.g Citrus clementina HOM05D005138 ORTHO05D006318 2.0e-52 209.1 133 72.9
PSO135G0826 Papaver somniferum HOM05D005138 ORTHO05D006318 2.0e-52 209.1 133 75.2
CSS0020361 Camellia sinensis var. sinensis HOM05D005138 ORTHO05D006318 3.4e-52 208.4 133 75.2
CsaV3_5G036890 Cucumis sativus L. HOM05D005138 ORTHO05D006318 4.5e-52 208.0 128 76.6
Actinidia34769 Actinidia chinensis HOM05D005138 ORTHO05D006318 5.9e-52 207.6 129 76.7
Os07g0640100 Oryza sativa ssp. japonica HOM05D005138 ORTHO05D006318 5.9e-52 207.6 131 74.8
THA.LOC104826756 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 5.9e-52 207.6 132 73.5
CANSAT56G0322 Cannabis sativa HOM05D005138 ORTHO05D006318 1.3e-51 206.5 133 74.4
Lsat_1_v5_gn_1_116501 Lactuca sativa HOM05D005138 ORTHO05D006318 3.8e-51 204.9 131 74.8
CDE04G1620 Ceratophyllum demersum HOM05D005138 ORTHO05D006318 6.5e-51 204.1 133 70.7
QL04p018722 Quercus lobata HOM05D005138 ORTHO05D006318 8.5e-51 203.8 132 72.0
TWI74G0500 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 1.1e-50 203.4 133 70.7
Cc07_g21240 Coffea canephora HOM05D005138 ORTHO05D006318 1.4e-50 203.0 131 71.8
SGA_v2.0_scaffold232G43489 Striga asiatica HOM05D005138 ORTHO05D006318 1.4e-50 203.0 133 72.2
Aa31LG3G6480 Aethionema arabicum HOM05D005138 ORTHO05D006318 1.9e-50 202.6 131 75.6
THA.LOC104799320 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 3.2e-50 201.8 132 73.5
BcaC09g48226 Brassica carinata HOM05D005138 ORTHO05D006318 5.5e-50 201.1 131 74.0
A03p37550 Brassica napus HOM05D005138 ORTHO05D006318 5.5e-50 201.1 131 74.0
C01p53060 Brassica napus HOM05D005138 ORTHO05D006318 5.5e-50 201.1 131 74.0
C03p45540 Brassica napus HOM05D005138 ORTHO05D006318 5.5e-50 201.1 131 74.0
SGA_v2.0_scaffold43G16284 Striga asiatica HOM05D005138 ORTHO05D006318 5.5e-50 201.1 133 70.7
Thhalv10021751m.g Eutrema salsugineum HOM05D005138 ORTHO05D006318 7.2e-50 200.7 131 74.0
Sp3g10480 Schrenkiella parvula HOM05D005138 ORTHO05D006318 7.2e-50 200.7 131 74.0
BcaB04g18689 Brassica carinata HOM05D005138 ORTHO05D006318 1.2e-49 199.9 131 73.3
MBI13_g09225_MAGBIO Magnolia biondii HOM05D005138 ORTHO05D006318 2.7e-49 198.7 133 69.9
CARHR086810 Cardamine hirsuta HOM05D005138 ORTHO05D006318 3.6e-49 198.4 131 72.5
arahy.Tifrunner.gnm1.ann1.EVE7SV Arachis hypogaea HOM05D005138 ORTHO05D006318 4.7e-49 198.0 131 71.8
arahy.Tifrunner.gnm1.ann1.K7P4IE Arachis hypogaea HOM05D005138 ORTHO05D006318 4.7e-49 198.0 131 71.8
AL3G23920 Arabidopsis lyrata HOM05D005138 ORTHO05D006318 6.1e-49 197.6 131 71.8
Carub.0003s1162 Capsella rubella HOM05D005138 ORTHO05D006318 7.9e-49 197.2 131 71.8
Aqoxy2G00421 Aquilegia oxysepala HOM05D005138 ORTHO05D006318 1.4e-48 196.4 131 71.8
AT3G12260 Arabidopsis thaliana HOM05D005138 ORTHO05D006318 2.3e-48 195.7 131 71.0
Sopen01g016660 Solanum pennellii HOM05D005138 ORTHO05D006318 6.7e-48 194.1 131 70.2
C05p55530 Brassica napus HOM05D005138 ORTHO05D006318 1.5e-47 193.0 140 69.3
BraA03t12909Z Brassica rapa HOM05D005138 ORTHO05D006318 1.5e-47 193.0 141 68.8
Hund13385 Selenicereus undatus HOM05D005138 ORTHO05D006318 2.0e-47 192.6 125 72.8
BolC3t16831H Brassica oleracea HOM05D005138 ORTHO05D006318 2.6e-47 192.2 140 68.6
Solyc01g022750.3 Solanum lycopersicum HOM05D005138 ORTHO05D006318 2.6e-47 192.2 131 69.5
BolC1t05249H Brassica oleracea HOM05D005138 ORTHO05D006318 3.3e-47 191.8 144 67.4
BolC5t34219H Brassica oleracea HOM05D005138 ORTHO05D006318 4.4e-47 191.4 140 68.6
Nitab4.5_0010402g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 4.4e-47 191.4 131 67.2
HPP92_021197 Vanilla planifolia HOM05D005138 ORTHO05D006318 4.4e-47 191.4 136 69.9
PGSC0003DMG400004276 Solanum tuberosum HOM05D005138 ORTHO05D006318 5.7e-47 191.0 128 68.0
A05p37100 Brassica napus HOM05D005138 ORTHO05D006318 9.7e-47 190.3 138 68.8
BraA05t22507Z Brassica rapa HOM05D005138 ORTHO05D006318 9.7e-47 190.3 138 68.8
Medtr8g040150 Medicago truncatula HOM05D005138 ORTHO05D006318 1.7e-46 189.5 132 67.4
Lj3g0022103 Lotus japonicus HOM05D005138 ORTHO05D006318 3.7e-46 188.3 134 70.1
TWI38G0338 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 3.7e-46 188.3 130 64.6
Lalb_Chr03g0032141 Lupinus albus HOM05D005138 ORTHO05D006318 4.8e-46 188.0 133 68.4
ATR1096G082 Amborella trichopoda HOM05D005138 ORTHO05D006318 6.3e-46 187.6 131 64.9
Psat4g099920 Pisum sativum HOM05D005138 ORTHO05D006318 6.3e-46 187.6 132 65.9
Migut.N01855 Erythranthe guttata HOM05D005138 ORTHO05D006318 1.1e-45 186.8 133 67.7
Aqoxy2G00420 Aquilegia oxysepala HOM05D000001 ORTHO05D007291 1.4e-45 186.4 125 72.0
EL10Ac2g02769 Beta vulgaris HOM05D005138 ORTHO05D000392 1.4e-45 186.4 123 69.9
AUR62031745 Chenopodium quinoa HOM05D005138 ORTHO05D006318 2.4e-45 185.7 125 68.8
AUR62032630 Chenopodium quinoa HOM05D005138 ORTHO05D006318 2.4e-45 185.7 125 68.8
Sc10g0004520 Simmondsia chinensis HOM05D005138 ORTHO05D006318 2.4e-45 185.7 126 68.3
TPR.G8538 Trifolium pratense HOM05D005138 ORTHO05D006318 4.1e-45 184.9 132 64.4
Glyma.15G231900 Glycine max HOM05D005138 ORTHO05D006318 1.2e-44 183.3 129 68.2
Hund15745 Selenicereus undatus HOM05D005138 ORTHO05D006318 2.0e-44 182.6 133 69.2
CAN.G1362.7 Capsicum annuum HOM05D005138 ORTHO05D006318 4.5e-44 181.4 127 67.7
Nitab4.5_0004389g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 7.7e-44 180.6 158 56.3
VMungo1127G1184 Vigna mungo HOM05D005138 ORTHO05D006318 7.7e-44 180.6 133 65.4
Glyma.09G091002 Glycine max HOM05D005138 ORTHO05D006318 1.0e-43 180.3 129 67.4
Glyma.13G193600 Glycine max HOM05D005138 ORTHO05D006318 1.3e-43 179.9 129 67.4
Ca_23972_v3 Cicer arietinum L. HOM05D005138 ORTHO05D006318 2.2e-43 179.1 132 62.1
unitig_899.g15579 Utricularia gibba HOM05D005138 ORTHO05D006318 3.8e-43 178.3 133 65.4
Ah.10g030100 Amaranthus hybridus HOM05D005138 ORTHO05D006318 6.5e-43 177.6 125 65.6
Ah.12g059980 Amaranthus hybridus HOM05D005138 ORTHO05D006318 8.5e-43 177.2 125 68.0
Phvul.011G203300 Phaseolus vulgaris HOM05D005138 ORTHO05D006318 8.5e-43 177.2 133 62.4
Sabra01G0021400 Salix brachista HOM05D005138 ORTHO05D006318 1.4e-42 176.4 129 64.3
SalBow5G1163 Salvia bowleyana HOM05D005138 ORTHO05D006318 1.4e-42 176.4 172 52.9
Potri.001G029900 Populus trichocarpa HOM05D005138 ORTHO05D006318 4.2e-42 174.9 129 64.3
MSTRG.5074 Avicennia marina HOM05D005138 ORTHO05D006318 5.5e-42 174.5 133 61.7
Peaxi162Scf00062g02216 Petunia axillaris HOM05D005138 ORTHO05D006318 1.5e-39 166.4 133 61.7
Nitab4.5_0000254g0180 Nicotiana tabacum HOM05D005138 ORTHO05D006318 9.7e-39 163.7 131 61.8
ECA248G2587 Erigeron canadensis HOM05D005138 ORTHO05D006318 7.0e-37 157.5 104 74.0
Mapoly0055s0110 Marchantia polymorpha HOM05D005138 ORTHO05D006318 8.5e-35 150.6 130 53.8
Peaxi162Scf01042g00115 Petunia axillaris HOM05D005138 ORTHO05D006318 1.2e-33 146.7 131 55.0
Actinidia38920 Actinidia chinensis HOM05D005138 ORTHO05D006318 3.6e-33 145.2 127 59.8
Pp3c1_37620 Physcomitrium patens HOM05D005138 ORTHO05D006318 4.0e-32 141.7 129 54.3
GSVIVG01036643001 Vitis vinifera HOM05D005138 ORTHO05D006318 4.0e-32 141.7 95 70.5
Pp3c2_3180 Physcomitrium patens HOM05D005138 ORTHO05D006318 6.8e-32 141.0 129 54.3
PGSC0003DMG400005271 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.5e-31 139.8 93 69.9
CBR_g52457 Chara braunii HOM05D005138 ORTHO05D006318 6.3e-30 134.4 134 51.5
RcHm_v2.0_Chr1g0325941 Rosa chinensis HOM05D005138 ORTHO05D006318 1.6e-28 129.8 78 87.2
COL.COLO4_20706 Corchorus olitorius HOM05D005138 ORTHO05D006318 4.7e-25 118.2 71 80.3
Lj2A602G38 Lonicera japonica HOM05D005138 ORTHO05D006318 1.0e-24 117.1 71 76.1
Rhsim09G0131900 Rhododendron simsii HOM05D005138 ORTHO05D006318 1.4e-24 116.7 72 77.8
ClCG00G004230 Citrullus lanatus HOM05D005138 ORTHO05D006318 1.8e-24 116.3 62 88.7
ClCG05G026940 Citrullus lanatus HOM05D005138 ORTHO05D006318 1.8e-24 116.3 62 88.7
Gorai.004G120800 Gossypium raimondii HOM05D005138 ORTHO05D006318 4.0e-24 115.2 75 73.3
MD07G1046900 Malus domestica HOM05D005138 ORTHO05D006318 2.0e-23 112.8 62 83.9
Gohir.A10G188200 Gossypium hirsutum HOM05D005138 ORTHO05D006318 3.4e-23 112.1 75 72.0
COL.COLO4_20705 Corchorus olitorius HOM05D005138 ORTHO05D006318 5.7e-23 111.3 62 82.3
ClCG05G026950 Citrullus lanatus HOM05D005138 ORTHO05D006318 2.2e-22 109.4 76 65.8
Gohir.D03G123000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 2.8e-22 109.0 71 73.2
BcaC01g04057 Brassica carinata HOM05D005138 ORTHO05D006318 4.8e-22 108.2 70 72.9
PGSC0003DMG401025557 Solanum tuberosum HOM05D005138 ORTHO05D006318 2.4e-21 105.9 72 69.4
Lalb_Chr19g0132971 Lupinus albus HOM05D005138 ORTHO05D006318 7.0e-21 104.4 76 67.1
Nn7g36804 Nelumbo nucifera HOM05D005138 ORTHO05D006318 3.5e-20 102.1 65 75.4
CAN.G575.4 Capsicum annuum HOM05D005138 ORTHO05D006318 1.3e-19 100.1 77 61.0
SMO364G0517 Selaginella moellendorffii HOM05D005138 ORTHO05D006318 1.3e-19 100.1 130 39.2
Lalb_Chr19g0132981 Lupinus albus HOM05D005138 ORTHO05D006318 4.0e-16 88.6 64 67.2
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 9.8e-15 84.0 77 55.8
Oeu064133.1 Olea europaea HOM05D005138 ORTHO05D006318 2.4e-13 79.3 56 67.9
SEGI_36145 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 5.4e-13 78.2 74 45.9
MCO10G366 Micromonas commoda HOM05D005138 ORTHO05D006318 7.8e-12 74.3 116 36.2
AUR62042115 Chenopodium quinoa HOM05D005138 ORTHO05D006318 1.3e-11 73.6 53 64.2
VMungo0464G2031 Vigna mungo HOM05D005138 ORTHO05D011906 7.3e-10 67.8 58 56.9
PRCOL_00003180 Prasinoderma coloniale HOM05D000737 ORTHO05D000581 2.6e-07 59.3 76 35.5
Cre12.g555250 Chlamydomonas reinhardtii HOM05D005138 ORTHO05D006318 3.4e-07 58.9 112 29.5
SEGI_02182 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 4.4e-07 58.5 58 34.5
PGSC0003DMG400003395 Solanum tuberosum HOM05D005138 ORTHO05D006318 3.7e-06 55.5 48 50.0


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