Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0325711 Rosa chinensis HOM05D000539 ORTHO05D000233 5.8e-92 340.9 173 100.0
RcHm_v2.0_Chr7g0201281 Rosa chinensis HOM05D000539 ORTHO05D000233 2.4e-66 255.8 160 83.8
RcHm_v2.0_Chr5g0072071 Rosa chinensis HOM05D000539 ORTHO05D000592 3.4e-36 155.6 167 53.9
RcHm_v2.0_Chr3g0483461 Rosa chinensis HOM05D000539 ORTHO05D000233 2.7e-33 146.0 155 58.7
RcHm_v2.0_Chr3g0485221 Rosa chinensis HOM05D000539 ORTHO05D000233 2.7e-33 146.0 155 58.7
RcHm_v2.0_Chr1g0329531 Rosa chinensis HOM05D000539 ORTHO05D000233 4.1e-21 105.5 178 38.2
RcHm_v2.0_Chr4g0393861 Rosa chinensis HOM05D000539 ORTHO05D000233 7.0e-21 104.8 186 36.6
RcHm_v2.0_Chr4g0407991 Rosa chinensis HOM05D000539 ORTHO05D000233 1.6e-20 103.6 186 36.6
RcHm_v2.0_Chr1g0364031 Rosa chinensis HOM05D000539 ORTHO05D000233 5.0e-19 98.6 123 41.5
RcHm_v2.0_Chr1g0340611 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-18 97.4 138 40.6
RcHm_v2.0_Chr4g0395771 Rosa chinensis HOM05D000539 ORTHO05D000592 5.5e-18 95.1 174 38.5
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 1.8e-16 90.1 167 35.9
RcHm_v2.0_Chr6g0286411 Rosa chinensis HOM05D000539 ORTHO05D000233 1.5e-15 87.0 118 42.4
RcHm_v2.0_Chr5g0079551 Rosa chinensis HOM05D000539 ORTHO05D000233 1.3e-14 84.0 106 42.5
FvH4_1g25001 Fragaria vesca HOM05D000539 ORTHO05D000233 2.8e-14 82.8 123 37.4
FvH4_5g23293 Fragaria vesca HOM05D000539 ORTHO05D000233 6.3e-14 81.6 166 36.7
RcHm_v2.0_Chr2g0095181 Rosa chinensis HOM05D000539 ORTHO05D000233 6.3e-14 81.6 118 40.7
FvH4_7g07223 Fragaria vesca HOM05D000539 ORTHO05D000592 1.1e-13 80.9 168 36.3
FvH4_1g26740 Fragaria vesca HOM05D000539 ORTHO05D000592 4.1e-13 79.0 169 37.3
FAN19G2795 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.6e-12 77.0 132 40.9
FvH4_3g31624 Fragaria vesca HOM05D000539 ORTHO05D000592 2.0e-12 76.6 169 36.1
FAN15G1280 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.7e-12 74.7 131 38.9
FvH4_4g04601 Fragaria vesca HOM05D000539 ORTHO05D000233 1.3e-11 73.9 131 38.2
FAN06G4635 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.7e-11 73.6 133 38.3
FAN16G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.7e-11 73.6 133 38.3
FAN25G0088 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.7e-11 73.6 133 38.3
FvH4_6g22902 Fragaria vesca HOM05D000539 ORTHO05D000233 2.2e-11 73.2 118 38.1
FAN22G0175 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.2e-11 73.2 157 33.8
FAN04G1988 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.8e-11 72.4 133 38.3
FAN16G1455 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.8e-11 72.4 133 38.3
FAN17G0771 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.8e-11 72.4 133 38.3
FAN24G2468 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.8e-11 72.4 133 38.3
FAN05G3022 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.0e-11 72.0 133 38.3
FAN07G1063 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.0e-11 72.0 133 38.3
FAN16G2445 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.0e-11 72.0 133 38.3
FAN17G3107 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.0e-11 72.0 133 38.3
FAN23G0124 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.0e-11 72.0 133 38.3
FAN23G2368 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.0e-11 72.0 133 38.3
FAN22G1565 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.1e-10 70.9 133 38.3
RcHm_v2.0_Chr7g0228371 Rosa chinensis HOM05D000539 ORTHO05D000233 1.5e-10 70.5 108 37.0
FAN19G0390 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.5e-10 69.7 95 42.1
FAN19G0618 Fragaria x ananassa HOM05D000539 ORTHO05D000233 4.2e-10 68.9 173 28.9
RcHm_v2.0_Chr2g0108861 Rosa chinensis HOM05D000539 ORTHO05D000233 5.5e-10 68.6 86 41.9
RcHm_v2.0_Chr4g0401831 Rosa chinensis HOM05D000539 ORTHO05D000233 7.2e-10 68.2 144 32.6
RcHm_v2.0_Chr5g0071741 Rosa chinensis HOM05D000539 ORTHO05D000233 2.1e-09 66.6 88 39.8
RcHm_v2.0_Chr5g0045831 Rosa chinensis HOM05D000539 ORTHO05D000592 4.7e-09 65.5 137 32.8
FvH4_4g09822 Fragaria vesca HOM05D000107 ORTHO05D000062 1.0e-08 64.3 137 33.6
FvH4_6g20911 Fragaria vesca HOM05D000539 ORTHO05D000233 1.0e-08 64.3 64 48.4
FAN02G4277 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.0e-08 64.3 137 33.6
FvH4_1g28483 Fragaria vesca HOM05D000539 ORTHO05D000233 2.3e-08 63.2 114 35.1
FvH4_3g14252 Fragaria vesca HOM05D000539 ORTHO05D000592 2.3e-08 63.2 114 35.1
FvH4_2g21272 Fragaria vesca HOM05D000539 ORTHO05D000233 6.8e-08 61.6 114 35.1
FAN17G2822 Fragaria x ananassa HOM05D000539 ORTHO05D000592 6.8e-08 61.6 158 33.5
FAN21G1450 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.0e-07 60.1 125 37.6
FvH4_4g09773 Fragaria vesca HOM05D000539 ORTHO05D000233 2.6e-07 59.7 123 31.7
FAN19G1975 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.7e-06 57.0 123 30.9
FvH4_2g07751 Fragaria vesca HOM05D000539 ORTHO05D000233 2.2e-06 56.6 112 33.0
FvH4_6g53024 Fragaria vesca HOM05D000539 ORTHO05D000233 3.7e-06 55.8 123 31.7
FAN26G1947 Fragaria x ananassa HOM05D000539 ORTHO05D000592 8.3e-06 54.7 121 37.2
FAN28G0602 Fragaria x ananassa HOM05D000539 ORTHO05D000592 8.3e-06 54.7 121 37.2


User provided reference genes

Program Settings