Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0325201 Rosa chinensis HOM05D000406 ORTHO05D341103 7.1e-26 119.8 59 100.0
RcHm_v2.0_Chr4g0397151 Rosa chinensis HOM05D000406 ORTHO05D344145 1.4e-21 105.5 65 86.2
RcHm_v2.0_Chr6g0266461 Rosa chinensis HOM05D000406 ORTHO05D347914 2.1e-09 65.1 38 86.8
FvH4_3g37720 Fragaria vesca HOM05D000406 ORTHO05D002714 3.9e-08 60.8 36 86.1
FAN11G1282 Fragaria x ananassa HOM05D000406 ORTHO05D002714 3.9e-08 60.8 36 86.1
FAN16G1720 Fragaria x ananassa HOM05D000406 ORTHO05D002714 3.9e-08 60.8 36 86.1
FAN25G2210 Fragaria x ananassa HOM05D000406 ORTHO05D002714 3.9e-08 60.8 36 86.1
MD11G1082900 Malus domestica HOM05D000406 ORTHO05D002714 3.9e-08 60.8 36 86.1
Prupe.6G063200 Prunus persica HOM05D000406 ORTHO05D002714 3.9e-08 60.8 36 86.1
RcHm_v2.0_Chr5g0067991 Rosa chinensis HOM05D000406 ORTHO05D002714 3.9e-08 60.8 36 86.1
FAN21G2464 Fragaria x ananassa HOM05D000406 ORTHO05D002714 8.8e-08 59.7 36 83.3
Cpa.g.sc112.80 Carica papaya HOM05D000406 ORTHO05D002714 3.3e-07 57.8 36 77.8
MD03G1078200 Malus domestica HOM05D000406 ORTHO05D002714 1.7e-06 55.5 39 79.5
Aa31LG1G11680 Aethionema arabicum HOM05D000406 ORTHO05D002714 2.2e-06 55.1 36 75.0
BcaB08g36301 Brassica carinata HOM05D000406 ORTHO05D002714 2.2e-06 55.1 36 72.2
A10p16230 Brassica napus HOM05D000406 ORTHO05D002714 2.2e-06 55.1 36 72.2
C09p51170 Brassica napus HOM05D000406 ORTHO05D002714 2.2e-06 55.1 36 72.2
BolC9t57979H Brassica oleracea HOM05D000406 ORTHO05D002714 2.2e-06 55.1 36 72.2
BraA10t43704Z Brassica rapa HOM05D000406 ORTHO05D002714 2.2e-06 55.1 36 72.2
CARHR285200 Cardamine hirsuta HOM05D000406 ORTHO05D002714 2.2e-06 55.1 36 75.0
Thhalv10014206m.g Eutrema salsugineum HOM05D000406 ORTHO05D002714 2.2e-06 55.1 36 75.0
Ciclev10028916m.g Citrus clementina HOM05D000406 ORTHO05D002714 2.8e-06 54.7 36 75.0
Lsat_1_v5_gn_9_25480 Lactuca sativa HOM05D000406 ORTHO05D002714 2.8e-06 54.7 36 75.0
CANSAT54G1992 Cannabis sativa HOM05D000406 ORTHO05D002714 3.7e-06 54.3 36 75.0
TWI75G1820 Tripterygium wilfordii HOM05D000406 ORTHO05D002714 4.8e-06 53.9 36 72.2
AL8G35350 Arabidopsis lyrata HOM05D000406 ORTHO05D002714 6.3e-06 53.5 36 72.2
AT5G58970 Arabidopsis thaliana HOM05D000406 ORTHO05D002714 6.3e-06 53.5 36 72.2
Carub.0008s1961 Capsella rubella HOM05D000406 ORTHO05D002714 6.3e-06 53.5 36 69.4
Sp6g20670 Schrenkiella parvula HOM05D000406 ORTHO05D002714 6.3e-06 53.5 36 72.2
Manes.02G122900 Manihot esculenta HOM05D000406 ORTHO05D002714 8.2e-06 53.1 36 72.2
THA.LOC104799409 Tarenaya hassleriana HOM05D000406 ORTHO05D002714 8.2e-06 53.1 35 71.4
THA.LOC104814900 Tarenaya hassleriana HOM05D000406 ORTHO05D002714 8.2e-06 53.1 35 71.4


User provided reference genes

Program Settings