Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0323151 Rosa chinensis HOM05D001482 ORTHO05D341569 1.4e-41 172.6 90 100.0
Prupe.8G038800 Prunus persica HOM05D001482 ORTHO05D001499 2.2e-10 68.9 62 61.3
MD09G1029900 Malus domestica HOM05D001482 ORTHO05D001499 4.9e-10 67.8 62 59.7
FAN05G5520 Fragaria x ananassa HOM05D001482 ORTHO05D001499 6.4e-10 67.4 61 60.7
MD17G1031900 Malus domestica HOM05D001482 ORTHO05D001499 8.4e-10 67.0 65 56.9
Prupe.3G287400 Prunus persica HOM05D001482 ORTHO05D001499 8.4e-10 67.0 62 58.1
RcHm_v2.0_Chr2g0172381 Rosa chinensis HOM05D001482 ORTHO05D001499 2.4e-09 65.5 59 62.7
FvH4_6g50980 Fragaria vesca HOM05D001482 ORTHO05D001499 4.2e-09 64.7 79 51.9
FAN09G3858 Fragaria x ananassa HOM05D001482 ORTHO05D001499 4.2e-09 64.7 79 51.9
FAN14G2994 Fragaria x ananassa HOM05D001482 ORTHO05D001499 4.2e-09 64.7 79 51.9
FAN02G2263 Fragaria x ananassa HOM05D001482 ORTHO05D001499 1.2e-08 63.2 79 50.6
ClCG10G014050 Citrullus lanatus HOM05D001482 ORTHO05D001499 1.6e-08 62.8 58 58.6
CiPaw.04G026200 Carya illinoinensis HOM05D001482 ORTHO05D001499 2.1e-08 62.4 73 50.7
Sed0004886 Sechium edule HOM05D001482 ORTHO05D001499 2.7e-08 62.0 58 56.9
CANSAT64G2550 Cannabis sativa HOM05D001482 ORTHO05D001499 6.0e-08 60.8 64 54.7
Ca_04180_v3 Cicer arietinum L. HOM05D001482 ORTHO05D001499 7.8e-08 60.5 61 52.5
Medtr3g011150 Medicago truncatula HOM05D001482 ORTHO05D001499 7.8e-08 60.5 65 52.3
MELO3C009972.2 Cucumis melo HOM05D001482 ORTHO05D001499 1.3e-07 59.7 58 55.2
Haze_14697 Corylus avellana HOM05D001482 ORTHO05D001499 1.7e-07 59.3 62 53.2
Aqoxy3G02901 Aquilegia oxysepala HOM05D001482 ORTHO05D001499 3.9e-07 58.2 68 51.5
CiPaw.03G040400 Carya illinoinensis HOM05D001482 ORTHO05D001499 6.6e-07 57.4 59 52.5
CsaV3_3G042610 Cucumis sativus L. HOM05D001482 ORTHO05D001499 6.6e-07 57.4 58 53.4
Lj2g0010471 Lotus japonicus HOM05D001482 ORTHO05D001499 1.1e-06 56.6 65 49.2
Medtr5g019420 Medicago truncatula HOM05D001482 ORTHO05D001499 1.9e-06 55.8 65 49.2
Oeu043039.2 Olea europaea HOM05D001482 ORTHO05D001499 2.5e-06 55.5 59 52.5
Sed0012292 Sechium edule HOM05D001482 ORTHO05D001499 2.5e-06 55.5 60 53.3
Lj3g0026972 Lotus japonicus HOM05D001482 ORTHO05D001499 3.3e-06 55.1 69 46.4
arahy.Tifrunner.gnm1.ann1.8040JK Arachis hypogaea HOM05D001482 ORTHO05D001499 5.6e-06 54.3 62 46.8
CSS0030691 Camellia sinensis var. sinensis HOM05D001482 ORTHO05D001499 5.6e-06 54.3 59 50.8
Lju41C37G7 Lonicera japonica HOM05D001482 ORTHO05D001499 7.3e-06 53.9 66 47.0
CSS0019924 Camellia sinensis var. sinensis HOM05D001482 ORTHO05D001499 9.6e-06 53.5 58 51.7
Hma1.2p1_0224F.1_g094660 Hydrangea macrophylla HOM05D001482 ORTHO05D001499 9.6e-06 53.5 61 52.5
Medtr6g005580 Medicago truncatula HOM05D001482 ORTHO05D001499 9.6e-06 53.5 60 45.0
SalBow7G2022 Salvia bowleyana HOM05D001482 ORTHO05D001499 9.6e-06 53.5 61 49.2


User provided reference genes

Program Settings