Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0322801 Rosa chinensis HOM05D031301 ORTHO05D013876 3.7e-176 621.7 378 100.0
RcHm_v2.0_Chr4g0419581 Rosa chinensis HOM05D031301 ORTHO05D013876 4.4e-84 315.8 258 62.4
RcHm_v2.0_Chr2g0084191 Rosa chinensis HOM05D031301 ORTHO05D010628 7.3e-47 192.2 168 56.0
FvH4_4g15603 Fragaria vesca HOM05D013195 ORTHO05D020618 1.9e-26 124.4 265 31.7
RcHm_v2.0_Chr1g0314411 Rosa chinensis HOM05D013248 ORTHO05D013876 5.1e-16 89.7 196 29.1
RcHm_v2.0_Chr1g0328081 Rosa chinensis HOM05D013248 ORTHO05D013876 5.1e-16 89.7 196 29.1
FvH4_6g25501 Fragaria vesca HOM05D031301 ORTHO05D013876 8.7e-16 89.0 88 46.6
Atru.chr6.385 Acer truncatum HOM05D000706 ORTHO05D000116 4.3e-15 86.7 178 28.7
Atru.chr6.434_Atru.chr6.435 Acer truncatum HOM05D000706 ORTHO05D001554 4.3e-15 86.7 178 28.7
RcHm_v2.0_Chr1g0320121 Rosa chinensis HOM05D013248 ORTHO05D013876 8.1e-14 82.4 180 29.4
RcHm_v2.0_Chr3g0461191 Rosa chinensis HOM05D013248 ORTHO05D013876 8.1e-14 82.4 182 28.0
MBI16_g34672_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 4.4e-12 76.6 160 28.1
RcHm_v2.0_Chr4g0416881 Rosa chinensis HOM05D013248 ORTHO05D013876 5.8e-12 76.3 166 30.1
RcHm_v2.0_Chr2g0094621 Rosa chinensis HOM05D013248 ORTHO05D013876 1.3e-11 75.1 195 26.7
MD00G1026400 Malus domestica HOM05D012428 ORTHO05D000116 2.1e-09 67.8 150 29.3
Ciclev10003975m.g Citrus clementina HOM05D009413 ORTHO05D000116 2.7e-09 67.4 158 27.8
CANSAT54G2560 Cannabis sativa HOM05D012521 ORTHO05D011451 4.6e-09 66.6 172 29.1
MBI03_g00028_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 7.8e-09 65.9 169 27.8
MBI11_g42047_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 7.8e-09 65.9 163 27.6
CANSAT25G0896 Cannabis sativa HOM05D012521 ORTHO05D011451 1.7e-08 64.7 172 28.5
QL05p071009 Quercus lobata HOM05D013248 ORTHO05D000116 3.0e-08 63.9 179 27.4
MBI05_g14943_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 5.1e-08 63.2 118 31.4
RcHm_v2.0_Chr2g0140201 Rosa chinensis HOM05D013248 ORTHO05D013876 5.1e-08 63.2 203 25.6
SGA_v2.0_scaffold68G22922 Striga asiatica HOM05D050415 ORTHO05D000116 6.6e-08 62.8 164 27.4
MBI19_g36755_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 2.5e-07 60.8 120 31.7
Rhsim08G0029200 Rhododendron simsii HOM05D009413 ORTHO05D000116 3.3e-07 60.5 143 32.2
CANSAT54G1078 Cannabis sativa HOM05D012521 ORTHO05D011451 7.3e-07 59.3 115 32.2
MBI12_g04512_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 1.3e-06 58.5 115 32.2
MBI08_g10608_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 1.6e-06 58.2 168 26.2
Oeu036039.1 Olea europaea HOM05D002774 ORTHO05D000116 1.6e-06 58.2 131 29.0
FvH4_1g28880 Fragaria vesca HOM05D011317 ORTHO05D020640 4.8e-06 56.6 133 27.8
MBI18_g29266_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 6.2e-06 56.2 89 33.7
Oeu049204.1 Olea europaea HOM05D002774 ORTHO05D000116 6.2e-06 56.2 189 26.5
Oeu051288.1 Olea europaea HOM05D002774 ORTHO05D000116 6.2e-06 56.2 146 28.1
QL02p091007 Quercus lobata HOM05D009413 ORTHO05D000116 8.1e-06 55.8 186 24.7


User provided reference genes

Program Settings