Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0322201 Rosa chinensis HOM05D000750 ORTHO05D342882 3.0e-25 117.9 65 100.0
Cfa009625 Carpinus fangiana HOM05D000750 ORTHO05D000714 4.8e-07 57.4 34 85.3
Haze_22994 Corylus avellana HOM05D000750 ORTHO05D000714 4.8e-07 57.4 34 85.3
MD03G1011500 Malus domestica HOM05D000750 ORTHO05D000714 8.2e-07 56.6 34 85.3
MD11G1014200 Malus domestica HOM05D000750 ORTHO05D000714 8.2e-07 56.6 34 85.3
Prupe.6G011900 Prunus persica HOM05D000750 ORTHO05D000714 8.2e-07 56.6 34 85.3
RcHm_v2.0_Chr5g0081361 Rosa chinensis HOM05D000750 ORTHO05D000714 8.2e-07 56.6 46 67.4
CiPaw.13G171500 Carya illinoinensis HOM05D000750 ORTHO05D000714 1.1e-06 56.2 33 87.9
CiPaw.14G130200 Carya illinoinensis HOM05D000750 ORTHO05D000714 2.4e-06 55.1 33 84.8
COL.COLO4_10448 Corchorus olitorius HOM05D000750 ORTHO05D000714 2.4e-06 55.1 46 65.2
Gohir.A08G012300 Gossypium hirsutum HOM05D000750 ORTHO05D000714 5.3e-06 53.9 34 79.4
Nn7g35966 Nelumbo nucifera HOM05D000750 ORTHO05D000714 5.3e-06 53.9 34 79.4
Thecc.09G215100 Theobroma cacao HOM05D000750 ORTHO05D000714 5.3e-06 53.9 34 79.4
Atru.chr3.2222 Acer truncatum HOM05D000750 ORTHO05D000714 9.0e-06 53.1 33 81.8
Ciclev10014444m.g Citrus clementina HOM05D000750 ORTHO05D000714 9.0e-06 53.1 33 81.8


User provided reference genes

Program Settings