Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0321141 Rosa chinensis HOM05D008163 ORTHO05D010305 1.3e-64 249.6 126 100.0
FvH4_7g02510 Fragaria vesca HOM05D008163 ORTHO05D010305 1.9e-60 235.7 126 93.7
FAN03G0237 Fragaria x ananassa HOM05D008163 ORTHO05D010305 8.9e-58 226.9 118 94.1
FAN06G4466 Fragaria x ananassa HOM05D008163 ORTHO05D010305 1.2e-57 226.5 125 88.8
RcHm_v2.0_Chr2g0149911 Rosa chinensis HOM05D008163 ORTHO05D010305 2.0e-57 225.7 126 90.5
Prupe.4G282300 Prunus persica HOM05D008163 ORTHO05D010305 1.6e-35 152.9 108 75.0
Prupe.7G030100 Prunus persica HOM05D008163 ORTHO05D010305 1.4e-34 149.8 108 73.1
MD12G1044600 Malus domestica HOM05D008163 ORTHO05D010305 5.2e-34 147.9 111 69.4
MD15G1374400 Malus domestica HOM05D008163 ORTHO05D010305 5.2e-34 147.9 111 69.4
SHI03043 Sapria himalayana HOM05D008163 ORTHO05D010305 7.6e-33 144.1 104 65.4
Sabra07G0061500 Salix brachista HOM05D008163 ORTHO05D010305 1.9e-31 139.4 110 66.4
Potri.007G072900 Populus trichocarpa HOM05D008163 ORTHO05D010305 2.4e-31 139.0 110 64.5
Sabra15G0022500 Salix brachista HOM05D008163 ORTHO05D010305 3.2e-31 138.7 110 65.5
Hma1.2p1_0136F.1_g062003 Hydrangea macrophylla HOM05D008163 ORTHO05D010305 5.4e-31 137.9 112 65.2
SalBow1G5351 Salvia bowleyana HOM05D008163 ORTHO05D010305 6.0e-30 134.4 94 73.4
SalBow1G7817 Salvia bowleyana HOM05D008163 ORTHO05D010305 6.0e-30 134.4 94 73.4
Carub.0003s2247 Capsella rubella HOM05D008163 ORTHO05D010305 1.0e-29 133.7 102 65.7
CARHR098200 Cardamine hirsuta HOM05D008163 ORTHO05D010305 1.5e-28 129.8 107 63.6
Sp3g20090 Schrenkiella parvula HOM05D008163 ORTHO05D010305 1.9e-28 129.4 110 61.8
AL3G36570 Arabidopsis lyrata HOM05D008163 ORTHO05D010305 2.5e-28 129.0 112 58.9
AT3G22300 Arabidopsis thaliana HOM05D008163 ORTHO05D010305 2.5e-28 129.0 110 60.0
BraA03t13418Z Brassica rapa HOM05D008163 ORTHO05D010305 4.3e-28 128.3 110 61.8
Thhalv10021368m.g Eutrema salsugineum HOM05D008163 ORTHO05D010305 4.3e-28 128.3 107 61.7
Aa31LG8G8870 Aethionema arabicum HOM05D008163 ORTHO05D010305 7.3e-28 127.5 98 63.3
BcaB06g26334 Brassica carinata HOM05D008163 ORTHO05D010305 9.6e-28 127.1 110 60.9
HanXRQChr07g0196921 Helianthus annuus HOM05D003855 ORTHO05D004722 1.2e-27 126.7 108 60.2
A03p42710 Brassica napus HOM05D008163 ORTHO05D010305 1.6e-27 126.3 110 60.0
A05p26470 Brassica napus HOM05D008163 ORTHO05D010305 2.1e-27 125.9 107 61.7
BraA05t21520Z Brassica rapa HOM05D008163 ORTHO05D010305 2.1e-27 125.9 107 61.7
ECA238G1787 Erigeron canadensis HOM05D003855 ORTHO05D004722 2.1e-27 125.9 107 59.8
BcaC01g03452 Brassica carinata HOM05D008163 ORTHO05D010305 3.6e-27 125.2 107 60.7
C03p52430 Brassica napus HOM05D008163 ORTHO05D010305 3.6e-27 125.2 107 60.7
BolC3t17513H Brassica oleracea HOM05D008163 ORTHO05D010305 3.6e-27 125.2 107 60.7
FAN10G0940 Fragaria x ananassa HOM05D008163 ORTHO05D010305 4.7e-27 124.8 66 95.5
BcaC05g28083 Brassica carinata HOM05D008163 ORTHO05D010305 4.0e-26 121.7 98 64.3
C05p41060 Brassica napus HOM05D008163 ORTHO05D010305 4.0e-26 121.7 98 64.3
BolC5t32848H Brassica oleracea HOM05D008163 ORTHO05D010305 4.0e-26 121.7 98 64.3
Solyc11g063600.3 Solanum lycopersicum HOM05D008163 ORTHO05D010305 4.0e-26 121.7 112 61.6
Manes.09G036100 Manihot esculenta HOM05D008163 ORTHO05D010305 2.6e-25 119.0 85 69.4
Actinidia29350 Actinidia chinensis HOM05D008163 ORTHO05D010305 7.6e-25 117.5 90 63.3
CSS0033547 Camellia sinensis var. sinensis HOM05D008163 ORTHO05D010305 1.4e-23 113.2 90 64.4
CSS0047821 Camellia sinensis var. sinensis HOM05D008163 ORTHO05D010305 1.4e-23 113.2 90 64.4
Os12g0517200 Oryza sativa ssp. japonica HOM05D008163 ORTHO05D010305 1.4e-23 113.2 109 56.0
Zm00001eb215210 Zea mays HOM05D008163 ORTHO05D010305 2.4e-23 112.5 106 54.7
Rhsim06G0223600 Rhododendron simsii HOM05D000504 ORTHO05D000403 1.2e-22 110.2 77 67.5
Zm00001eb056700 Zea mays HOM05D008163 ORTHO05D010305 1.6e-22 109.8 106 55.7
Prupe.7G029400 Prunus persica HOM05D008163 ORTHO05D010305 3.5e-22 108.6 74 74.3
DCAR_027582 Daucus carota HOM05D008163 ORTHO05D010305 6.0e-22 107.8 118 48.3
SEGI_07019 Sequoiadendron giganteum HOM05D008163 ORTHO05D010305 1.0e-21 107.1 102 54.9
Hund21444 Selenicereus undatus HOM05D008163 ORTHO05D010305 3.0e-21 105.5 98 55.1
AUR62012772 Chenopodium quinoa HOM05D008163 ORTHO05D010305 1.1e-20 103.6 98 58.2
AUR62021886 Chenopodium quinoa HOM05D008163 ORTHO05D010305 1.5e-20 103.2 98 57.1
PSO017G7110 Papaver somniferum HOM05D008163 ORTHO05D010305 9.6e-20 100.5 84 59.5
PSO170G4613 Papaver somniferum HOM05D008163 ORTHO05D010305 9.6e-20 100.5 84 59.5
Nn1g09991 Nelumbo nucifera HOM05D008163 ORTHO05D010305 1.6e-19 99.8 83 65.1
Nn1g10091 Nelumbo nucifera HOM05D008163 ORTHO05D010305 1.6e-19 99.8 83 65.1
EL10Ac8g20156 Beta vulgaris HOM05D008163 ORTHO05D010305 2.1e-19 99.4 90 57.8
AUR62036216 Chenopodium quinoa HOM05D008163 ORTHO05D010305 2.1e-19 99.4 100 58.0
TPR.G20554 Trifolium pratense HOM05D008163 ORTHO05D010305 2.1e-19 99.4 85 64.7
Ah.14g087810 Amaranthus hybridus HOM05D000967 ORTHO05D000796 3.6e-19 98.6 99 52.5
Lalb_Chr00c21g0405831 Lupinus albus HOM05D008163 ORTHO05D010305 3.6e-19 98.6 84 64.3
Nitab4.5_0000161g0030 Nicotiana tabacum HOM05D008163 ORTHO05D010305 1.4e-18 96.7 87 58.6
Pp3c3_3090 Physcomitrium patens HOM05D008163 ORTHO05D010305 1.7e-16 89.7 108 40.7
Nitab4.5_0001127g0310 Nicotiana tabacum HOM05D008163 ORTHO05D010305 4.9e-16 88.2 87 57.5
Nitab4.5_0000592g0150 Nicotiana tabacum HOM05D008163 ORTHO05D010305 6.4e-16 87.8 80 61.2
Nitab4.5_0000172g1360 Nicotiana tabacum HOM05D008163 ORTHO05D010305 1.6e-14 83.2 78 57.7
MD07G1062900 Malus domestica HOM05D008163 ORTHO05D010305 6.0e-14 81.3 74 56.8
AagrBONN_evm.TU.Sc2ySwM_368.972 Anthoceros agrestis HOM05D008163 ORTHO05D010305 6.6e-13 77.8 100 42.0
SMO234G0032 Selaginella moellendorffii HOM05D008163 ORTHO05D010305 8.1e-11 70.9 96 42.7
Glyma.17G185500 Glycine max HOM05D008163 ORTHO05D010305 1.8e-10 69.7 69 56.5
SMO196G0141 Selaginella moellendorffii HOM05D008163 ORTHO05D010305 1.2e-09 67.0 80 43.8
Nitab4.5_0001702g0010 Nicotiana tabacum HOM05D011509 ORTHO05D010305 1.3e-08 63.5 53 64.2
Nitab4.5_0004300g0280 Nicotiana tabacum HOM05D003467 ORTHO05D004220 6.0e-06 54.7 50 64.0


User provided reference genes

Program Settings