Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0320451 Rosa chinensis HOM05D000009 ORTHO05D000008 1.9e-69 266.5 168 100.0
FAN06G1741 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.3e-59 231.9 168 90.5
FAN03G2348 Fragaria x ananassa HOM05D000009 ORTHO05D000008 4.5e-58 228.8 168 89.9
Prupe.8G117900 Prunus persica HOM05D000009 ORTHO05D000008 2.0e-21 107.1 177 55.9
FvH4_7g02420 Fragaria vesca HOM05D000009 ORTHO05D000008 4.8e-20 102.4 177 41.8
MD02G1314300 Malus domestica HOM05D000009 ORTHO05D000008 1.2e-18 97.8 157 61.1
RcHm_v2.0_Chr1g0320081 Rosa chinensis HOM05D000009 ORTHO05D000008 7.7e-18 95.1 97 50.5
RcHm_v2.0_Chr1g0320411 Rosa chinensis HOM05D000009 ORTHO05D000008 2.9e-17 93.2 97 49.5
RcHm_v2.0_Chr1g0315001 Rosa chinensis HOM05D000009 ORTHO05D000008 1.5e-16 90.9 158 54.4
RcHm_v2.0_Chr1g0320281 Rosa chinensis HOM05D000009 ORTHO05D000008 3.2e-16 89.7 90 51.1
RcHm_v2.0_Chr1g0321491 Rosa chinensis HOM05D000009 ORTHO05D000008 3.2e-16 89.7 171 54.4
RcHm_v2.0_Chr1g0320971 Rosa chinensis HOM05D000009 ORTHO05D000008 4.2e-16 89.4 95 49.5
RcHm_v2.0_Chr1g0319741 Rosa chinensis HOM05D000009 ORTHO05D000008 5.5e-16 89.0 95 47.4
RcHm_v2.0_Chr1g0321091 Rosa chinensis HOM05D000009 ORTHO05D000008 7.2e-16 88.6 94 47.9
RcHm_v2.0_Chr1g0320131 Rosa chinensis HOM05D000009 ORTHO05D000008 9.4e-16 88.2 97 47.4
FvH4_7g02450 Fragaria vesca HOM05D000009 ORTHO05D000008 1.2e-15 87.8 183 52.5
RcHm_v2.0_Chr1g0373891 Rosa chinensis HOM05D000009 ORTHO05D000008 1.2e-15 87.8 215 44.2
RcHm_v2.0_Chr1g0320891 Rosa chinensis HOM05D000009 ORTHO05D000008 2.7e-15 86.7 176 50.6
FAN06G1588 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.6e-15 86.3 213 45.5
FAN05G0450 Fragaria x ananassa HOM05D000009 ORTHO05D000008 4.7e-15 85.9 214 46.3
FAN06G1227 Fragaria x ananassa HOM05D000009 ORTHO05D000008 6.1e-15 85.5 183 51.9
RcHm_v2.0_Chr1g0373781 Rosa chinensis HOM05D000009 ORTHO05D000008 6.1e-15 85.5 215 45.1
FAN03G1718 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.0e-14 84.7 182 50.5
RcHm_v2.0_Chr2g0131121 Rosa chinensis HOM05D000009 ORTHO05D000008 2.3e-14 83.6 178 34.8
FvH4_7g28110 Fragaria vesca HOM05D000009 ORTHO05D000008 5.2e-14 82.4 213 45.1
FAN06G2518 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.0e-13 80.5 211 45.0
RcHm_v2.0_Chr1g0374841 Rosa chinensis HOM05D000009 ORTHO05D000008 2.0e-13 80.5 215 45.1
FvH4_7g28390 Fragaria vesca HOM05D000009 ORTHO05D000008 2.6e-13 80.1 214 43.9
FvH4_7g27891 Fragaria vesca HOM05D000009 ORTHO05D000008 7.5e-13 78.6 214 42.5
Prupe.2G028000 Prunus persica HOM05D000009 ORTHO05D000008 2.2e-12 77.0 176 50.6
RcHm_v2.0_Chr1g0327521 Rosa chinensis HOM05D000009 ORTHO05D000008 2.2e-12 77.0 212 44.3
Prupe.2G023500 Prunus persica HOM05D000009 ORTHO05D000008 3.7e-12 76.3 211 46.0
FAN06G4497 Fragaria x ananassa HOM05D000009 ORTHO05D000008 6.3e-12 75.5 158 51.3
FAN10G0796 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.4e-11 73.6 152 52.6
FvH4_7g00850 Fragaria vesca HOM05D000009 ORTHO05D000008 3.1e-11 73.2 158 48.7
FvH4_7g27610 Fragaria vesca HOM05D000009 ORTHO05D000008 9.1e-11 71.6 214 41.6
FAN03G1200 Fragaria x ananassa HOM05D000009 ORTHO05D000008 9.1e-11 71.6 212 41.5
FAN03G2779 Fragaria x ananassa HOM05D000009 ORTHO05D000008 9.1e-11 71.6 212 41.5
FAN06G0654 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.6e-10 70.9 209 41.6
FAN10G2142 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.6e-10 70.9 214 40.7
FAN06G3214 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.5e-10 69.7 199 44.2
RcHm_v2.0_Chr7g0237021 Rosa chinensis HOM05D000009 ORTHO05D000008 4.5e-10 69.3 201 42.3
FvH4_7g25680 Fragaria vesca HOM05D000009 ORTHO05D000008 5.9e-10 68.9 209 31.1
FAN06G2344 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.9e-10 68.9 174 33.3
FAN06G3462 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.9e-10 68.9 212 41.5
FAN10G0536 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.3e-09 67.8 214 43.0
Prupe.2G022500 Prunus persica HOM05D000009 ORTHO05D000008 1.3e-09 67.8 213 41.8
FAN03G2452 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.0e-09 65.9 214 40.7
FvH4_7g27330 Fragaria vesca HOM05D000009 ORTHO05D000008 6.5e-09 65.5 215 41.9
RcHm_v2.0_Chr1g0317951 Rosa chinensis HOM05D000009 ORTHO05D000008 6.5e-09 65.5 210 43.8
FvH4_7g27355 Fragaria vesca HOM05D000009 ORTHO05D000008 1.9e-08 63.9 232 40.1
MD11G1045100 Malus domestica HOM05D000009 ORTHO05D000008 1.9e-08 63.9 212 43.9
FAN06G2045 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.5e-08 63.5 232 39.7
FvH4_7g27642 Fragaria vesca HOM05D000009 ORTHO05D000008 3.2e-08 63.2 237 39.2
RcHm_v2.0_Chr1g0320241 Rosa chinensis HOM05D000009 ORTHO05D000008 4.2e-08 62.8 74 45.9
FAN10G3211 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.2e-07 61.2 179 44.1
MD11G1033200 Malus domestica HOM05D000009 ORTHO05D000008 1.2e-07 61.2 211 44.5
MD11G1043500 Malus domestica HOM05D000009 ORTHO05D000008 1.2e-07 61.2 214 43.9
Prupe.2G022900 Prunus persica HOM05D000009 ORTHO05D000008 1.6e-07 60.8 174 48.3
Prupe.2G022400 Prunus persica HOM05D000009 ORTHO05D000008 2.7e-07 60.1 129 34.9
Prupe.2G067600 Prunus persica HOM05D000009 ORTHO05D000008 2.7e-07 60.1 131 32.1
FAN06G4120 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.6e-07 59.7 188 35.6
MD11G1030400 Malus domestica HOM05D000009 ORTHO05D000008 4.7e-07 59.3 208 43.8
FvH4_7g26980 Fragaria vesca HOM05D000009 ORTHO05D025397 6.1e-07 58.9 198 42.9
MD03G1042300 Malus domestica HOM05D000009 ORTHO05D000008 8.0e-07 58.5 84 41.7
MD11G1011400 Malus domestica HOM05D000009 ORTHO05D000008 8.0e-07 58.5 166 47.0
FAN06G2391 Fragaria x ananassa HOM05D000009 ORTHO05D025397 1.0e-06 58.2 214 41.6
MD00G1168300 Malus domestica HOM05D000009 ORTHO05D000008 2.3e-06 57.0 162 51.9
MD11G1030300 Malus domestica HOM05D000009 ORTHO05D000008 2.3e-06 57.0 162 51.9
MD11G1033600 Malus domestica HOM05D000009 ORTHO05D000008 2.3e-06 57.0 211 43.6
FAN06G0348 Fragaria x ananassa HOM05D000009 ORTHO05D000008 4.0e-06 56.2 232 38.4


User provided reference genes

Program Settings