Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0318841 Rosa chinensis HOM05D009091 ORTHO05D003768 4.8e-44 180.6 83 100.0
RcHm_v2.0_Chr1g0313071 Rosa chinensis HOM05D009091 ORTHO05D003768 1.4e-43 179.1 83 98.8
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 8.8e-38 159.8 83 89.2
RcHm_v2.0_Chr3g0496641 Rosa chinensis HOM05D009091 ORTHO05D003768 7.2e-24 113.6 78 61.5
RcHm_v2.0_Chr1g0315701 Rosa chinensis HOM05D009091 ORTHO05D003768 2.7e-23 111.7 78 61.5
RcHm_v2.0_Chr5g0060161 Rosa chinensis HOM05D009091 ORTHO05D003768 2.6e-21 105.1 81 55.6
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 7.5e-21 103.6 81 55.6
FvH4_3g45091 Fragaria vesca HOM05D009091 ORTHO05D003768 2.8e-20 101.7 78 55.1
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 4.1e-19 97.8 81 55.6
RcHm_v2.0_Chr1g0326261 Rosa chinensis HOM05D009091 ORTHO05D003768 7.0e-19 97.1 70 60.0
RcHm_v2.0_Chr6g0280321 Rosa chinensis HOM05D009091 ORTHO05D003768 9.1e-19 96.7 80 56.2
FvH4_4g10040 Fragaria vesca HOM05D009091 ORTHO05D003768 9.4e-16 86.7 71 52.1
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 2.6e-13 78.6 84 48.8
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 7.5e-13 77.0 77 48.1
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 9.8e-13 76.6 77 49.4
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.7e-12 75.9 77 46.8
CSS0009587 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 2.2e-12 75.5 64 53.1
CSS0011469 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 2.2e-12 75.5 64 53.1
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 2.8e-12 75.1 77 48.1
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.1e-11 73.2 74 47.3
Atru.chr2.2530 Acer truncatum HOM05D001899 ORTHO05D001858 2.2e-09 65.5 75 42.7
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 1.2e-07 59.7 76 39.5
RcHm_v2.0_Chr0c28g0501051 Rosa chinensis HOM05D008321 ORTHO05D003768 2.7e-07 58.5 78 37.2
RcHm_v2.0_Chr4g0444771 Rosa chinensis HOM05D007314 ORTHO05D003768 2.7e-07 58.5 88 42.0
CsaV3_7G021120 Cucumis sativus L. HOM05D007314 ORTHO05D003768 8.0e-07 57.0 69 40.6
FvH4_4g06631 Fragaria vesca HOM05D008321 ORTHO05D003768 1.0e-06 56.6 78 37.2
MELO3C001336.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.4e-06 56.2 82 39.0
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 1.4e-06 56.2 78 34.6
FAN15G1405 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.4e-06 56.2 77 40.3
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 1.4e-06 56.2 78 37.2
Oeu007614.1 Olea europaea HOM05D009091 ORTHO05D003768 1.8e-06 55.8 46 56.5
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.0e-06 55.1 65 41.5
FvH4_6g20172 Fragaria vesca HOM05D008321 ORTHO05D003768 4.0e-06 54.7 78 37.2
RcHm_v2.0_Chr4g0415851 Rosa chinensis HOM05D009091 ORTHO05D003768 5.2e-06 54.3 37 54.1
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 6.8e-06 53.9 67 38.8
PSO801G0005 Papaver somniferum HOM05D008526 ORTHO05D010380 6.8e-06 53.9 71 35.2
FAN21G1044 Fragaria x ananassa HOM05D008321 ORTHO05D003768 8.8e-06 53.5 66 40.9


User provided reference genes

Program Settings