Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0316271 Rosa chinensis HOM05D062739 ORTHO05D003879 4.2e-62 241.9 198 100.0
RcHm_v2.0_Chr1g0316231 Rosa chinensis HOM05D062739 ORTHO05D003879 2.0e-56 223.0 196 96.9
RcHm_v2.0_Chr1g0316221 Rosa chinensis HOM05D015504 ORTHO05D003879 3.1e-17 92.8 136 44.9
Prupe.8G051700 Prunus persica HOM05D000029 ORTHO05D003879 2.2e-10 70.1 98 44.9
Prupe.8G056100 Prunus persica HOM05D000029 ORTHO05D003879 1.4e-09 67.4 98 41.8
Actinidia23329 Actinidia chinensis HOM05D000029 ORTHO05D003879 4.1e-09 65.9 101 37.6
RcHm_v2.0_Chr6g0272091 Rosa chinensis HOM05D000029 ORTHO05D003879 4.1e-09 65.9 101 42.6
arahy.Tifrunner.gnm1.ann1.TX2FLU Arachis hypogaea HOM05D000029 ORTHO05D003879 9.2e-09 64.7 102 36.3
MD10G1047000 Malus domestica HOM05D000029 ORTHO05D003879 1.2e-08 64.3 101 37.6
Lj4A516T35 Lonicera japonica HOM05D000029 ORTHO05D003879 2.0e-08 63.5 102 36.3
Sc01g0001730 Simmondsia chinensis HOM05D000029 ORTHO05D003879 3.5e-08 62.8 87 42.5
FvH4_5g16590 Fragaria vesca HOM05D000029 ORTHO05D003879 4.5e-08 62.4 101 38.6
arahy.Tifrunner.gnm1.ann1.BISG48 Arachis hypogaea HOM05D000029 ORTHO05D003879 5.9e-08 62.0 102 35.3
QL02p034028 Quercus lobata HOM05D000029 ORTHO05D003879 7.7e-08 61.6 102 38.2
FAN08G2074 Fragaria x ananassa HOM05D000029 ORTHO05D003879 1.0e-07 61.2 100 39.0
Lj4C507T2 Lonicera japonica HOM05D000029 ORTHO05D003879 1.0e-07 61.2 102 35.3
FvH4_2g12120 Fragaria vesca HOM05D000029 ORTHO05D003879 1.3e-07 60.8 98 39.8
FAN24G0359 Fragaria x ananassa HOM05D000029 ORTHO05D003879 1.3e-07 60.8 98 39.8
FAN27G1538 Fragaria x ananassa HOM05D000029 ORTHO05D003879 1.3e-07 60.8 101 41.6
MD10G1047300 Malus domestica HOM05D000029 ORTHO05D003879 1.3e-07 60.8 100 37.0
Rhsim10G0034000 Rhododendron simsii HOM05D000029 ORTHO05D003879 1.3e-07 60.8 82 42.7
RcHm_v2.0_Chr6g0272061 Rosa chinensis HOM05D000029 ORTHO05D003879 1.7e-07 60.5 96 49.0
Atru.chr13.1823 Acer truncatum HOM05D000029 ORTHO05D003879 2.9e-07 59.7 102 38.2
CSS0001053 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D003879 2.9e-07 59.7 99 37.4
CSS0010851 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D003879 2.9e-07 59.7 99 37.4
CSS0006375 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D003879 3.8e-07 59.3 96 37.5
RhsimUnG0063100 Rhododendron simsii HOM05D000029 ORTHO05D003879 3.8e-07 59.3 80 38.8
vmacro22381 Vaccinium macrocarpon HOM05D000132 ORTHO05D000058 6.6e-07 58.5 84 36.9
CSS0010817 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D003879 1.1e-06 57.8 98 36.7
CSS0046817 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D003879 1.1e-06 57.8 98 36.7
CSS0047735 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D003879 1.1e-06 57.8 98 36.7
Atru.chr13.1801 Acer truncatum HOM05D000029 ORTHO05D003879 1.9e-06 57.0 95 37.9
Dinv08018 Davidia involucrata HOM05D000029 ORTHO05D003879 1.9e-06 57.0 96 36.5
Atru.chr13.1800 Acer truncatum HOM05D000029 ORTHO05D003879 2.5e-06 56.6 95 36.8
Atru.chr13.1828 Acer truncatum HOM05D000029 ORTHO05D003879 2.5e-06 56.6 95 36.8
Nitab4.5_0010911g0020 Nicotiana tabacum HOM05D000029 ORTHO05D003879 2.5e-06 56.6 96 35.4
Eucgr.L01480 Eucalyptus grandis HOM05D000029 ORTHO05D003879 3.3e-06 56.2 98 36.7
vmacro05722 Vaccinium macrocarpon HOM05D000132 ORTHO05D000058 3.3e-06 56.2 82 36.6
CANSAT64G2826 Cannabis sativa HOM05D000029 ORTHO05D003879 4.3e-06 55.8 96 37.5
Rhsim10G0041300 Rhododendron simsii HOM05D000029 ORTHO05D003879 4.3e-06 55.8 80 37.5
Atru.chr13.1802 Acer truncatum HOM05D000029 ORTHO05D003879 5.6e-06 55.5 95 36.8
CAN.G342.4 Capsicum annuum HOM05D000029 ORTHO05D003879 5.6e-06 55.5 96 34.4
ClCG09G010450 Citrullus lanatus HOM05D000029 ORTHO05D003879 5.6e-06 55.5 93 36.6
MELO3C023665.2 Cucumis melo HOM05D000029 ORTHO05D003879 5.6e-06 55.5 93 37.6
Eucgr.F04133 Eucalyptus grandis HOM05D000029 ORTHO05D003879 5.6e-06 55.5 96 36.5
Rhsim10G0034100 Rhododendron simsii HOM05D000029 ORTHO05D003879 5.6e-06 55.5 80 40.0
Lalb_Chr19g0129791 Lupinus albus HOM05D000029 ORTHO05D003879 9.5e-06 54.7 100 36.0
Potri.019G084800 Populus trichocarpa HOM05D000029 ORTHO05D003879 9.5e-06 54.7 96 35.4
vmacro05721 Vaccinium macrocarpon HOM05D000029 ORTHO05D003879 9.5e-06 54.7 94 33.0


User provided reference genes

Program Settings