Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0315511 Rosa chinensis HOM05D000009 ORTHO05D344986 5.4e-43 177.2 85 100.0
RcHm_v2.0_Chr1g0315001 Rosa chinensis HOM05D000009 ORTHO05D000008 3.0e-25 118.2 71 84.5
FvH4_7g00850 Fragaria vesca HOM05D000009 ORTHO05D000008 1.5e-24 115.9 71 81.7
FAN06G4497 Fragaria x ananassa HOM05D000009 ORTHO05D000008 7.4e-24 113.6 70 81.4
FAN10G0796 Fragaria x ananassa HOM05D000009 ORTHO05D000008 7.4e-24 113.6 70 81.4
MD02G1314300 Malus domestica HOM05D000009 ORTHO05D000008 8.7e-17 90.1 77 58.4
RcHm_v2.0_Chr1g0328061 Rosa chinensis HOM05D000009 ORTHO05D000008 7.2e-11 70.5 68 58.8
RcHm_v2.0_Chr1g0321491 Rosa chinensis HOM05D000009 ORTHO05D000008 1.0e-09 66.6 82 47.6
Prupe.8G117900 Prunus persica HOM05D000009 ORTHO05D000008 3.0e-09 65.1 87 43.7
RcHm_v2.0_Chr5g0041691 Rosa chinensis HOM05D000009 ORTHO05D000008 3.9e-09 64.7 72 47.2
RcHm_v2.0_Chr1g0319841 Rosa chinensis HOM05D000009 ORTHO05D000008 5.1e-09 64.3 82 43.9
RcHm_v2.0_Chr1g0320241 Rosa chinensis HOM05D000009 ORTHO05D000008 6.7e-09 63.9 82 42.7
FvH4_7g00360 Fragaria vesca HOM05D000009 ORTHO05D000008 8.8e-09 63.5 78 44.9
RcHm_v2.0_Chr1g0319741 Rosa chinensis HOM05D000009 ORTHO05D000008 8.8e-09 63.5 82 42.7
RcHm_v2.0_Chr1g0320131 Rosa chinensis HOM05D000009 ORTHO05D000008 1.5e-08 62.8 82 41.5
MD11G1031300 Malus domestica HOM05D000009 ORTHO05D000008 2.5e-08 62.0 86 39.5
Prupe.2G028000 Prunus persica HOM05D000009 ORTHO05D000008 2.5e-08 62.0 82 42.7
MD11G1011400 Malus domestica HOM05D000009 ORTHO05D000008 3.3e-08 61.6 76 42.1
RcHm_v2.0_Chr1g0320551 Rosa chinensis HOM05D000009 ORTHO05D000008 4.3e-08 61.2 82 41.5
MD11G1041100 Malus domestica HOM05D000009 ORTHO05D000008 5.7e-08 60.8 79 41.8
RcHm_v2.0_Chr1g0320971 Rosa chinensis HOM05D000009 ORTHO05D000008 5.7e-08 60.8 82 40.2
RcHm_v2.0_Chr1g0320891 Rosa chinensis HOM05D000009 ORTHO05D000008 7.4e-08 60.5 82 39.0
RcHm_v2.0_Chr1g0321021 Rosa chinensis HOM05D000009 ORTHO05D000008 7.4e-08 60.5 77 46.8
RcHm_v2.0_Chr2g0131121 Rosa chinensis HOM05D000009 ORTHO05D000008 1.7e-07 59.3 77 42.9
MD11G1040600 Malus domestica HOM05D000009 ORTHO05D000008 2.2e-07 58.9 79 40.5
RcHm_v2.0_Chr1g0373891 Rosa chinensis HOM05D000009 ORTHO05D000008 2.2e-07 58.9 68 45.6
FvH4_7g27610 Fragaria vesca HOM05D000009 ORTHO05D000008 3.7e-07 58.2 76 42.1
RcHm_v2.0_Chr1g0334991 Rosa chinensis HOM05D000009 ORTHO05D000008 6.3e-07 57.4 82 41.5
FAN10G3211 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.1e-06 56.6 76 40.8
MD11G1011700 Malus domestica HOM05D000009 ORTHO05D000008 1.1e-06 56.6 79 41.8
FvH4_7g27355 Fragaria vesca HOM05D000009 ORTHO05D000008 1.4e-06 56.2 76 40.8
FAN06G3462 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.4e-06 56.2 76 40.8
Prupe.2G023600 Prunus persica HOM05D000009 ORTHO05D000008 1.4e-06 56.2 75 42.7
FAN01G0287 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.8e-06 55.8 65 49.2
FAN05G0450 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.8e-06 55.8 76 39.5
MD11G1043100 Malus domestica HOM05D000009 ORTHO05D000008 1.8e-06 55.8 88 37.5
FAN03G1200 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.4e-06 55.5 76 40.8
FAN03G2779 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.4e-06 55.5 76 40.8
MD07G1033600 Malus domestica HOM05D000009 ORTHO05D000008 2.4e-06 55.5 70 45.7
RcHm_v2.0_Chr1g0320281 Rosa chinensis HOM05D000009 ORTHO05D000008 2.4e-06 55.5 82 41.5
RcHm_v2.0_Chr1g0320661 Rosa chinensis HOM05D000009 ORTHO05D000008 2.4e-06 55.5 82 39.0
FvH4_7g28390 Fragaria vesca HOM05D000009 ORTHO05D000008 4.1e-06 54.7 70 42.9
RcHm_v2.0_Chr1g0374841 Rosa chinensis HOM05D000009 ORTHO05D000008 4.1e-06 54.7 68 45.6
FvH4_7g27330 Fragaria vesca HOM05D000009 ORTHO05D000008 5.3e-06 54.3 76 38.2
FAN06G0348 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.3e-06 54.3 76 39.5
FAN06G0654 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.3e-06 54.3 76 39.5
FAN06G2045 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.3e-06 54.3 76 39.5
MD11G1045600 Malus domestica HOM05D000009 ORTHO05D000008 5.3e-06 54.3 75 38.7
Prupe.2G022500 Prunus persica HOM05D000009 ORTHO05D000008 5.3e-06 54.3 75 41.3
FAN10G0536 Fragaria x ananassa HOM05D000009 ORTHO05D000008 6.9e-06 53.9 76 39.5
FAN10G2142 Fragaria x ananassa HOM05D000009 ORTHO05D000008 9.1e-06 53.5 76 40.8
MD00G1168300 Malus domestica HOM05D000009 ORTHO05D000008 9.1e-06 53.5 78 42.3
MD03G1009000 Malus domestica HOM05D000009 ORTHO05D000008 9.1e-06 53.5 82 36.6
MD11G1030300 Malus domestica HOM05D000009 ORTHO05D000008 9.1e-06 53.5 78 42.3


User provided reference genes

Program Settings