Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0315101 Rosa chinensis HOM05D000370 ORTHO05D348762 1.9e-37 158.7 80 100.0
RcHm_v2.0_Chr2g0148391 Rosa chinensis HOM05D000370 ORTHO05D006313 2.2e-25 118.6 64 93.8
FvH4_6g36420 Fragaria vesca HOM05D000370 ORTHO05D006313 2.3e-19 98.6 64 82.8
FAN02G0132 Fragaria x ananassa HOM05D000370 ORTHO05D006313 2.3e-19 98.6 64 82.8
FAN02G1594 Fragaria x ananassa HOM05D000370 ORTHO05D006313 2.3e-19 98.6 64 82.8
FAN14G2100 Fragaria x ananassa HOM05D000370 ORTHO05D006313 2.3e-19 98.6 64 82.8
FAN09G0130 Fragaria x ananassa HOM05D000370 ORTHO05D006313 1.1e-18 96.3 64 81.2
FAN05G4541 Fragaria x ananassa HOM05D000370 ORTHO05D006313 5.3e-16 87.4 64 78.1
RcHm_v2.0_Chr1g0315561 Rosa chinensis HOM05D000370 ORTHO05D011368 7.0e-16 87.0 49 91.8
RcHm_v2.0_Chr1g0322971 Rosa chinensis HOM05D000370 ORTHO05D341757 2.0e-15 85.5 46 95.7
MD09G1169500 Malus domestica HOM05D000370 ORTHO05D006313 6.7e-11 70.5 69 59.4
Prupe.3G027500 Prunus persica HOM05D000370 ORTHO05D006313 6.7e-11 70.5 69 59.4
MD17G1157700 Malus domestica HOM05D000370 ORTHO05D006313 2.6e-10 68.6 65 60.0


User provided reference genes

Program Settings