Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0313071 Rosa chinensis HOM05D009091 ORTHO05D003768 3.7e-44 181.0 83 100.0
RcHm_v2.0_Chr1g0318841 Rosa chinensis HOM05D009091 ORTHO05D003768 1.1e-43 179.5 83 98.8
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 2.3e-38 161.8 83 90.4
RcHm_v2.0_Chr3g0496641 Rosa chinensis HOM05D009091 ORTHO05D003768 2.5e-24 115.2 78 62.8
RcHm_v2.0_Chr1g0315701 Rosa chinensis HOM05D009091 ORTHO05D003768 9.4e-24 113.2 78 62.8
RcHm_v2.0_Chr5g0060161 Rosa chinensis HOM05D009091 ORTHO05D003768 6.7e-22 107.1 81 56.8
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 2.0e-21 105.5 81 56.8
FvH4_3g45091 Fragaria vesca HOM05D009091 ORTHO05D003768 9.7e-21 103.2 78 56.4
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 1.1e-19 99.8 81 56.8
RcHm_v2.0_Chr1g0326261 Rosa chinensis HOM05D009091 ORTHO05D003768 1.8e-19 99.0 70 61.4
RcHm_v2.0_Chr6g0280321 Rosa chinensis HOM05D009091 ORTHO05D003768 2.4e-19 98.6 80 57.5
FvH4_4g10040 Fragaria vesca HOM05D009091 ORTHO05D003768 3.2e-16 88.2 71 53.5
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 6.8e-14 80.5 84 50.0
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 2.0e-13 79.0 77 49.4
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 4.4e-13 77.8 77 48.1
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 7.5e-13 77.0 77 49.4
CSS0009587 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 2.2e-12 75.5 64 53.1
CSS0011469 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 2.2e-12 75.5 64 53.1
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 2.2e-12 75.5 77 48.1
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 3.7e-12 74.7 74 48.6
Atru.chr2.2530 Acer truncatum HOM05D001899 ORTHO05D001858 5.9e-10 67.4 75 44.0
Aqoxy5G02986 Aquilegia oxysepala HOM05D007314 ORTHO05D000285 6.5e-09 63.9 79 41.8
Aqoxy3G03529 Aquilegia oxysepala HOM05D007314 ORTHO05D003768 8.5e-09 63.5 79 41.8
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 4.2e-08 61.2 76 40.8
RcHm_v2.0_Chr0c28g0501051 Rosa chinensis HOM05D008321 ORTHO05D003768 7.2e-08 60.5 78 38.5
CsaV3_7G021120 Cucumis sativus L. HOM05D007314 ORTHO05D003768 2.1e-07 58.9 69 42.0
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 2.1e-07 58.9 88 42.0
FvH4_4g06631 Fragaria vesca HOM05D008321 ORTHO05D003768 2.7e-07 58.5 78 38.5
RcHm_v2.0_Chr4g0444771 Rosa chinensis HOM05D007314 ORTHO05D003768 2.7e-07 58.5 88 42.0
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 3.6e-07 58.2 78 38.5
MELO3C001336.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.7e-07 57.8 82 40.2
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 4.7e-07 57.8 78 35.9
FvH4_6g20172 Fragaria vesca HOM05D008321 ORTHO05D003768 1.0e-06 56.6 78 38.5
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.0e-06 56.6 65 43.1
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 1.4e-06 56.2 74 43.2
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 1.4e-06 56.2 76 38.2
FAN15G1405 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.8e-06 55.8 77 40.3
Oeu007614.1 Olea europaea HOM05D009091 ORTHO05D003768 1.8e-06 55.8 46 56.5
RcHm_v2.0_Chr4g0415851 Rosa chinensis HOM05D009091 ORTHO05D003768 1.8e-06 55.8 37 56.8
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 2.3e-06 55.5 67 40.3
PSO801G0005 Papaver somniferum HOM05D008526 ORTHO05D010380 2.3e-06 55.5 71 36.6
FAN21G1044 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.0e-06 55.1 66 42.4
C09p36000 Brassica napus HOM05D007314 ORTHO05D003768 4.0e-06 54.7 69 36.2
MELO3C027594.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.0e-06 54.7 74 40.5
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 6.8e-06 53.9 74 41.9


User provided reference genes

Program Settings