Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0312971 Rosa chinensis HOM05D008793 ORTHO05D012151 7.8e-48 193.4 90 100.0
Lalb_Chr00c21g0406041 Lupinus albus HOM05D008793 ORTHO05D012151 6.1e-45 183.7 90 97.8
Lalb_Chr00c39g0409041 Lupinus albus HOM05D008793 ORTHO05D012151 6.1e-45 183.7 90 97.8
Lalb_Chr00c39g0409221 Lupinus albus HOM05D008793 ORTHO05D012151 6.1e-45 183.7 90 97.8
Lalb_Chr00c51g0413131 Lupinus albus HOM05D008793 ORTHO05D012151 6.1e-45 183.7 90 97.8
Potri.007G062322 Populus trichocarpa HOM05D008793 ORTHO05D012151 2.6e-43 178.3 90 95.6
Aa31csc1081G10 Aethionema arabicum HOM05D008793 ORTHO05D012151 3.4e-43 177.9 90 94.4
Lsat_1_v5_gn_5_16580 Lactuca sativa HOM05D008793 ORTHO05D012151 4.9e-42 174.1 90 93.3
BolSC28t60404H Brassica oleracea HOM05D008793 ORTHO05D012151 1.1e-38 162.9 91 90.1
BraSC77t46637Z Brassica rapa HOM05D008793 ORTHO05D014415 1.1e-38 162.9 91 90.1
Nitab4.5_0012260g0050 Nicotiana tabacum HOM05D008793 ORTHO05D010994 1.1e-38 162.9 89 89.9
Oeu051780.2 Olea europaea HOM05D001560 ORTHO05D003613 9.5e-38 159.8 83 92.8
Solyc00g500351.1 Solanum lycopersicum HOM05D002965 ORTHO05D011254 2.3e-36 155.2 79 94.9
MBI11_g09046_MAGBIO Magnolia biondii HOM05D008793 ORTHO05D012151 5.2e-36 154.1 89 85.4
Nitab4.5_0000886g0220 Nicotiana tabacum HOM05D008793 ORTHO05D010994 2.4e-33 145.2 86 83.7
Sopen06g007640 Solanum pennellii HOM05D002965 ORTHO05D012151 4.3e-30 134.4 82 82.9
Nitab4.5_0000307g0310 Nicotiana tabacum HOM05D011634 ORTHO05D012151 7.3e-30 133.7 77 83.1
Nitab4.5_0001506g0030 Nicotiana tabacum HOM05D008793 ORTHO05D013999 7.3e-30 133.7 69 94.2
unitig_87.g27958 Utricularia gibba HOM05D008793 ORTHO05D012151 3.6e-29 131.3 67 95.5
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 2.3e-28 128.6 70 90.0
CDE02G0896 Ceratophyllum demersum HOM05D008793 ORTHO05D012151 6.6e-23 110.5 59 91.5
SHI49909 Sapria himalayana HOM05D008793 ORTHO05D012151 7.3e-22 107.1 90 65.6
GSVIVG01031611001 Vitis vinifera HOM05D001560 ORTHO05D003613 3.6e-21 104.8 79 65.8
SHI46362 Sapria himalayana HOM05D008793 ORTHO05D012151 4.7e-21 104.4 63 87.3
SHI38215 Sapria himalayana HOM05D000743 ORTHO05D000580 3.1e-20 101.7 59 86.4
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 6.8e-20 100.5 56 87.5
Nitab4.5_0000844g0180 Nicotiana tabacum HOM05D008793 ORTHO05D010994 8.9e-20 100.1 80 63.8
SHI39121 Sapria himalayana HOM05D000743 ORTHO05D000580 8.9e-20 100.1 56 83.9
SHI36773 Sapria himalayana HOM05D001560 ORTHO05D010994 1.5e-19 99.4 60 83.3
SHI36784 Sapria himalayana HOM05D001560 ORTHO05D010994 1.5e-19 99.4 60 83.3
SHI35978 Sapria himalayana HOM05D000743 ORTHO05D000580 2.2e-18 95.5 58 81.0
SHI36973 Sapria himalayana HOM05D001560 ORTHO05D003613 2.9e-18 95.1 79 65.8
SHI46273 Sapria himalayana HOM05D008793 ORTHO05D012151 2.9e-18 95.1 90 60.0
SHI36937 Sapria himalayana HOM05D008793 ORTHO05D012151 3.8e-18 94.7 57 80.7
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 1.9e-17 92.4 54 85.2
SHI35186 Sapria himalayana HOM05D000743 ORTHO05D000580 3.2e-17 91.7 58 79.3
SHI36137 Sapria himalayana HOM05D000743 ORTHO05D000580 4.2e-17 91.3 57 78.9
SHI44092 Sapria himalayana HOM05D001560 ORTHO05D010994 4.2e-17 91.3 51 84.3
Sopen11g024950 Solanum pennellii HOM05D000004 ORTHO05D000002 9.2e-17 90.1 49 91.8
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 2.1e-16 89.0 52 84.6
SHI34998 Sapria himalayana HOM05D001560 ORTHO05D003613 3.5e-16 88.2 55 80.0
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 3.5e-16 88.2 49 85.7
SHI50439 Sapria himalayana HOM05D001560 ORTHO05D010994 3.5e-16 88.2 51 84.3
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 4.6e-16 87.8 60 75.0
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 4.6e-16 87.8 60 75.0
SHI37011 Sapria himalayana HOM05D000743 ORTHO05D000580 1.0e-15 86.7 52 82.7
SHI38100 Sapria himalayana HOM05D008793 ORTHO05D012151 2.3e-15 85.5 51 82.4
SHI35452 Sapria himalayana HOM05D001560 ORTHO05D003613 5.1e-15 84.3 51 78.4
SHI36624 Sapria himalayana HOM05D001560 ORTHO05D003613 1.9e-14 82.4 48 83.3
SHI40903 Sapria himalayana HOM05D001560 ORTHO05D003613 1.9e-14 82.4 48 79.2
SHI43452 Sapria himalayana HOM05D001560 ORTHO05D003613 1.9e-14 82.4 53 83.0
SHI50746 Sapria himalayana HOM05D001560 ORTHO05D003613 2.5e-14 82.0 46 87.0
SHI43389 Sapria himalayana HOM05D000743 ORTHO05D000580 3.3e-14 81.6 55 78.2
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 4.3e-14 81.3 46 84.8
SHI44984 Sapria himalayana HOM05D001560 ORTHO05D003613 4.3e-14 81.3 50 82.0
SHI36585 Sapria himalayana HOM05D001560 ORTHO05D003613 7.3e-14 80.5 51 80.4
SHI37136 Sapria himalayana HOM05D001560 ORTHO05D003613 9.6e-14 80.1 46 84.8
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 9.6e-14 80.1 46 84.8
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 9.6e-14 80.1 46 84.8
SHI35454 Sapria himalayana HOM05D000743 ORTHO05D000580 2.1e-13 79.0 46 84.8
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 2.8e-13 78.6 48 81.2
SHI37087 Sapria himalayana HOM05D001560 ORTHO05D003613 2.8e-13 78.6 46 84.8
arahy.Tifrunner.gnm1.ann1.WM32N3 Arachis hypogaea HOM05D009805 ORTHO05D010994 3.6e-13 78.2 35 97.1
SHI36372 Sapria himalayana HOM05D001560 ORTHO05D003613 4.7e-13 77.8 43 86.0
SHI34615 Sapria himalayana HOM05D000743 ORTHO05D000580 6.2e-13 77.4 64 65.6
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-12 76.6 46 80.4
Nitab4.5_0000280g0180 Nicotiana tabacum HOM05D008793 ORTHO05D012151 1.4e-12 76.3 46 80.4
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 1.8e-12 75.9 47 76.6
SHI27345 Sapria himalayana HOM05D001560 ORTHO05D003613 2.4e-12 75.5 43 83.7
SalBow1G2595 Salvia bowleyana HOM05D009805 ORTHO05D010994 6.9e-12 73.9 40 92.5
Solyc11g045430.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 6.9e-12 73.9 52 67.3
BolSC28t60435H Brassica oleracea HOM05D008793 ORTHO05D012151 2.6e-11 72.0 46 84.8
BraSC77t46659Z Brassica rapa HOM05D008793 ORTHO05D012151 2.6e-11 72.0 46 84.8
SHI39990 Sapria himalayana HOM05D001560 ORTHO05D010994 3.4e-11 71.6 43 79.1
SHI35290 Sapria himalayana HOM05D000743 ORTHO05D000580 4.4e-11 71.2 49 75.5
SHI36018 Sapria himalayana HOM05D000743 ORTHO05D000580 4.4e-11 71.2 50 76.0
SHI37067 Sapria himalayana HOM05D001560 ORTHO05D010994 4.4e-11 71.2 43 79.1
SHI39078 Sapria himalayana HOM05D001560 ORTHO05D003613 1.7e-10 69.3 51 68.6
arahy.Tifrunner.gnm1.ann1.IE22H8 Arachis hypogaea HOM05D009805 ORTHO05D010994 4.9e-10 67.8 29 100.0
arahy.Tifrunner.gnm1.ann1.KWS21K Arachis hypogaea HOM05D009805 ORTHO05D010994 4.9e-10 67.8 29 100.0
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 4.9e-10 67.8 29 100.0
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 8.4e-10 67.0 45 75.6
SHI37166 Sapria himalayana HOM05D001560 ORTHO05D003613 8.4e-10 67.0 38 86.8
SHI44330 Sapria himalayana HOM05D001560 ORTHO05D003613 7.1e-09 63.9 38 81.6
SHI35235 Sapria himalayana HOM05D001560 ORTHO05D003613 9.3e-09 63.5 39 82.1
SHI38843 Sapria himalayana HOM05D001560 ORTHO05D003613 2.1e-08 62.4 37 83.8
Nitab4.5_0000172g0590 Nicotiana tabacum HOM05D008793 ORTHO05D012151 3.5e-08 61.6 32 87.5
C01p35010 Brassica napus HOM05D008793 ORTHO05D014415 1.3e-07 59.7 36 83.3
SHI31533 Sapria himalayana HOM05D000743 ORTHO05D000580 1.7e-07 59.3 42 71.4
SHI39754 Sapria himalayana HOM05D001560 ORTHO05D012151 3.9e-07 58.2 37 81.1
SHI36572 Sapria himalayana HOM05D001560 ORTHO05D010994 5.1e-07 57.8 37 81.1
SHI33106 Sapria himalayana HOM05D000743 ORTHO05D000580 4.3e-06 54.7 43 65.1


User provided reference genes

Program Settings