Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr0c11g0499521 Rosa chinensis HOM05D002804 ORTHO05D003755 3.6e-45 184.5 89 100.0
RcHm_v2.0_Chr7g0236001 Rosa chinensis HOM05D002804 ORTHO05D341774 1.3e-39 166.0 89 93.3
RcHm_v2.0_Chr7g0235841 Rosa chinensis HOM05D002804 ORTHO05D025426 1.5e-14 82.8 62 66.1
FvH4_5g34930 Fragaria vesca HOM05D002804 ORTHO05D025426 2.1e-13 79.0 63 61.9
FAN08G2676 Fragaria x ananassa HOM05D002804 ORTHO05D025426 3.6e-13 78.2 62 61.3
FAN04G3233 Fragaria x ananassa HOM05D002804 ORTHO05D025426 1.8e-12 75.9 62 59.7
RcHm_v2.0_Chr7g0235811 Rosa chinensis HOM05D002804 ORTHO05D003755 2.3e-12 75.5 62 61.3
FAN13G2413 Fragaria x ananassa HOM05D002804 ORTHO05D022637 4.0e-12 74.7 64 64.1
RcHm_v2.0_Chr0c11g0499411 Rosa chinensis HOM05D002804 ORTHO05D003755 5.2e-12 74.3 64 64.1
FvH4_5g31150 Fragaria vesca HOM05D002804 ORTHO05D022637 2.6e-11 72.0 64 62.5
RcHm_v2.0_Chr0c11g0499481 Rosa chinensis HOM05D002804 ORTHO05D003755 3.4e-11 71.6 64 60.9
RcHm_v2.0_Chr7g0236071 Rosa chinensis HOM05D002804 ORTHO05D003755 3.4e-11 71.6 68 55.9
RcHm_v2.0_Chr7g0236241 Rosa chinensis HOM05D002804 ORTHO05D003755 3.4e-11 71.6 64 60.9
FAN04G2366 Fragaria x ananassa HOM05D002804 ORTHO05D003755 9.8e-11 70.1 69 59.4
RcHm_v2.0_Chr0c11g0499511 Rosa chinensis HOM05D002804 ORTHO05D003755 9.8e-11 70.1 68 54.4
FAN18G1408 Fragaria x ananassa HOM05D002804 ORTHO05D022637 1.7e-10 69.3 64 59.4
RcHm_v2.0_Chr0c11g0499461 Rosa chinensis HOM05D002804 ORTHO05D003755 1.7e-10 69.3 64 60.9
RcHm_v2.0_Chr7g0236191 Rosa chinensis HOM05D002804 ORTHO05D022637 1.7e-10 69.3 64 60.9
FvH4_5g31080 Fragaria vesca HOM05D002804 ORTHO05D003755 3.7e-10 68.2 64 56.2
RcHm_v2.0_Chr7g0235871 Rosa chinensis HOM05D002804 ORTHO05D003755 6.3e-10 67.4 63 54.0
RcHm_v2.0_Chr7g0235971 Rosa chinensis HOM05D002804 ORTHO05D003755 6.3e-10 67.4 64 56.2
RcHm_v2.0_Chr7g0236051 Rosa chinensis HOM05D002804 ORTHO05D003755 6.3e-10 67.4 64 56.2
RcHm_v2.0_Chr7g0235991 Rosa chinensis HOM05D002804 ORTHO05D003755 1.1e-09 66.6 59 57.6
FvH4_5g35254 Fragaria vesca HOM05D002804 ORTHO05D022637 3.1e-09 65.1 64 56.2
RcHm_v2.0_Chr7g0235851 Rosa chinensis HOM05D002804 ORTHO05D003755 7.0e-09 63.9 63 52.4
RcHm_v2.0_Chr0c11g0499401 Rosa chinensis HOM05D002804 ORTHO05D022637 9.2e-09 63.5 64 57.8
RcHm_v2.0_Chr7g0236591 Rosa chinensis HOM05D002804 ORTHO05D003755 1.2e-08 63.2 74 52.7
RcHm_v2.0_Chr7g0236031 Rosa chinensis HOM05D002804 ORTHO05D003755 2.7e-08 62.0 63 54.0
FAN13G2866 Fragaria x ananassa HOM05D002804 ORTHO05D003755 4.5e-08 61.2 67 49.3
FAN18G3080 Fragaria x ananassa HOM05D002804 ORTHO05D003755 4.5e-08 61.2 67 49.3
RcHm_v2.0_Chr0c11g0499471 Rosa chinensis HOM05D002804 ORTHO05D003755 5.9e-08 60.8 38 81.6
RcHm_v2.0_Chr7g0236231 Rosa chinensis HOM05D002804 ORTHO05D003755 5.9e-08 60.8 38 81.6
RcHm_v2.0_Chr0c11g0499501 Rosa chinensis HOM05D002804 ORTHO05D003755 1.3e-07 59.7 46 65.2
RcHm_v2.0_Chr1g0342791 Rosa chinensis HOM05D002804 ORTHO05D003755 1.3e-07 59.7 64 51.6
FAN04G3225 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.7e-07 59.3 38 81.6
RcHm_v2.0_Chr7g0235921 Rosa chinensis HOM05D002804 ORTHO05D003755 1.7e-07 59.3 63 52.4
RcHm_v2.0_Chr7g0236021 Rosa chinensis HOM05D002804 ORTHO05D003755 1.7e-07 59.3 63 49.2
FvH4_5g35070 Fragaria vesca HOM05D002804 ORTHO05D029636 2.9e-07 58.5 63 50.8
FvH4_5g35300 Fragaria vesca HOM05D002804 ORTHO05D003755 6.6e-07 57.4 67 46.3
FAN18G3994 Fragaria x ananassa HOM05D002804 ORTHO05D003755 8.6e-07 57.0 67 44.8
FAN04G0362 Fragaria x ananassa HOM05D002804 ORTHO05D003755 2.5e-06 55.5 67 43.3
FAN08G1393 Fragaria x ananassa HOM05D002804 ORTHO05D029665 2.5e-06 55.5 67 44.8
FAN18G3851 Fragaria x ananassa HOM05D002804 ORTHO05D003755 2.5e-06 55.5 63 47.6
RcHm_v2.0_Chr7g0218341 Rosa chinensis HOM05D002804 ORTHO05D003755 2.5e-06 55.5 46 65.2
RcHm_v2.0_Chr7g0218381 Rosa chinensis HOM05D002804 ORTHO05D003755 3.3e-06 55.1 64 50.0
RcHm_v2.0_Chr7g0235901 Rosa chinensis HOM05D002804 ORTHO05D003755 3.3e-06 55.1 63 47.6
FvH4_5g35080 Fragaria vesca HOM05D002804 ORTHO05D003755 4.3e-06 54.7 61 54.1
RcHm_v2.0_Chr0c11g0499321 Rosa chinensis HOM05D002804 ORTHO05D029636 4.3e-06 54.7 53 52.8
RcHm_v2.0_Chr7g0236101 Rosa chinensis HOM05D002804 ORTHO05D029636 4.3e-06 54.7 53 52.8
FvH4_5g34950 Fragaria vesca HOM05D002804 ORTHO05D003755 5.6e-06 54.3 63 42.9
FvH4_5g35322 Fragaria vesca HOM05D002804 ORTHO05D003755 5.6e-06 54.3 63 44.4
FAN03G0147 Fragaria x ananassa HOM05D002804 ORTHO05D003755 7.3e-06 53.9 79 41.8
FAN18G3590 Fragaria x ananassa HOM05D002804 ORTHO05D003755 7.3e-06 53.9 63 47.6
FAN18G3729 Fragaria x ananassa HOM05D002804 ORTHO05D003755 7.3e-06 53.9 63 47.6


User provided reference genes

Program Settings