Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr0c11g0499381 Rosa chinensis HOM05D007421 ORTHO05D009203 3.6e-55 218.0 111 100.0
RcHm_v2.0_Chr7g0236151 Rosa chinensis HOM05D007421 ORTHO05D009203 3.6e-55 218.0 111 100.0
RcHm_v2.0_Chr7g0236451 Rosa chinensis HOM05D007421 ORTHO05D009203 6.9e-46 187.2 111 89.2
RcHm_v2.0_Chr7g0236491 Rosa chinensis HOM05D007421 ORTHO05D009203 6.9e-46 187.2 111 89.2
RcHm_v2.0_Chr5g0049711 Rosa chinensis HOM05D007421 ORTHO05D009203 7.6e-37 157.1 121 72.7
RcHm_v2.0_Chr7g0225501 Rosa chinensis HOM05D007421 ORTHO05D009203 2.1e-26 122.5 114 64.9
FAN08G3106 Fragaria x ananassa HOM05D007421 ORTHO05D009203 3.0e-25 118.6 93 72.0
FvH4_5g30620 Fragaria vesca HOM05D007421 ORTHO05D009203 1.7e-20 102.8 133 53.4
FAN18G4438 Fragaria x ananassa HOM05D007421 ORTHO05D009203 2.2e-20 102.4 133 53.4
FAN04G0435 Fragaria x ananassa HOM05D007421 ORTHO05D009203 8.4e-20 100.5 133 53.4
FvH4_5g35251 Fragaria vesca HOM05D007421 ORTHO05D009203 7.9e-18 94.0 86 61.6
MD08G1222100 Malus domestica HOM05D007421 ORTHO05D009203 6.9e-14 80.9 109 48.6
Prupe.1G559900 Prunus persica HOM05D007421 ORTHO05D009203 2.2e-12 75.9 116 45.7
GSVIVG01022264001 Vitis vinifera HOM05D007421 ORTHO05D009203 2.7e-10 68.9 115 37.4
CSS0030012 Camellia sinensis var. sinensis HOM05D007421 ORTHO05D009203 3.3e-08 62.0 83 42.2
CSS0048527 Camellia sinensis var. sinensis HOM05D007421 ORTHO05D009203 3.3e-08 62.0 83 42.2
CiPaw.06G151100 Carya illinoinensis HOM05D007421 ORTHO05D009203 5.7e-08 61.2 126 36.5
Dinv24220 Davidia involucrata HOM05D007421 ORTHO05D009203 5.7e-08 61.2 59 61.0
RcHm_v2.0_Chr7g0231151 Rosa chinensis HOM05D007421 ORTHO05D009203 7.4e-08 60.8 47 70.2
QL11p019404 Quercus lobata HOM05D007421 ORTHO05D009203 1.7e-07 59.7 105 41.9
RcHm_v2.0_Chr7g0236421 Rosa chinensis HOM05D007421 ORTHO05D009203 1.7e-07 59.7 45 71.1
Eucgr.I02692 Eucalyptus grandis HOM05D007421 ORTHO05D009203 2.2e-07 59.3 75 42.7
Haze_10776 Corylus avellana HOM05D007421 ORTHO05D009203 3.7e-07 58.5 104 43.3
Cfa005578 Carpinus fangiana HOM05D007421 ORTHO05D009203 6.3e-07 57.8 104 41.3
Medtr4g094298 Medicago truncatula HOM05D007421 ORTHO05D009203 6.3e-07 57.8 87 43.7
TAR628G0675 Trochodendron aralioides HOM05D007421 ORTHO05D009203 6.3e-07 57.8 82 47.6
Actinidia00249 Actinidia chinensis HOM05D007421 ORTHO05D009203 1.1e-06 57.0 79 48.1
Rhsim11G0134600 Rhododendron simsii HOM05D007421 ORTHO05D009203 1.1e-06 57.0 143 38.5
Manes.11G148500 Manihot esculenta HOM05D007421 ORTHO05D009203 1.8e-06 56.2 86 41.9
Cc02_g21850 Coffea canephora HOM05D007421 ORTHO05D009203 2.4e-06 55.8 101 41.6
COL.COLO4_20870 Corchorus olitorius HOM05D007321 ORTHO05D009244 6.9e-06 54.3 56 55.4
Sabra05G0133500 Salix brachista HOM05D007421 ORTHO05D009203 9.1e-06 53.9 108 34.3


User provided reference genes

Program Settings